Astyanax mexicanus (Mexican tetra): 103039328
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Entry
103039328 CDS
T05042
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex02010
ABC transporters
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103039328 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103039328 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103039328 (abca7)
Transporters [BR:
amex02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103039328 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103039328
NCBI-ProteinID:
XP_022525444
Ensembl:
ENSAMXG00000016743
LinkDB
All DBs
Position
16:complement(19461513..19498239)
Genome browser
AA seq
2351 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKFQLITELLWPLFLFLILISVRNSHPPYKQSQCHFPNKA
LPSAGTLAWVQGIVCNVNNPCFHYQTPGERPGQLANFDNSLISRLLVDAGHILTNTSDWT
ALTDDLSLAVQRLAERQDAWPNFPVGEYLRANETFSSFLRTNCSIPSNSVDHLMKARLNL
QVALTGSGLRLSEIVCNATLLGRYLTMEGNTSFTHLQRDLCAVPSDLLQQAERIFLSQMD
FRKIFTRERLLSSAADLQVLSQATASAAQELASIMDNIYTLSSFSELNTDLRLLLQENSS
ALPQKRFQAFSRIMCGHPEQDGESIPSFNWYEDQDIKSFLGRSRSEETDLENDTTSPFCK
SMIQNLEMNPVSRIFWRGIKPLFIGKILYAPDTPATRRIMKEVNRTFQTLDVLEEVYGAW
EEVGPRIKRFMENSLEIRLLKDFLRRPEVAVVVNLRLENTSWTASRLAQFLSTPDPDTPR
RKGAPPTWLDLYQDLNSSLSTLSQVTKCFSQNKMEGLDTEDEMVERALELLEDRQFWAGI
VFLLPDPSSSNLPPHVKYKIRMDVDDVTRTNKIKDKFWDPGPAADPFSDMRYIRGGFVYV
QDLVERAITQVLSGKQPSTGIYVQQMPYPCFVDDVFLRVLNRSLPLFLTLAWTYSVAMII
KCVVYEKEARLKETMRIMGLSSGTLWLSWFVSSYLNFLISSLLLVTVLKVGDILPYSDPA
VVFFFLSAFATATIMLCFLISTFFSRANLAAACGDLAYFSLYLPYVLCVSWREYLTSVHR
ILASFLSPVAFGFGCEYLSQYEEQGLGIQWSNMWSSPTEGDKYSLSTSIIMLYVDAFIYG
VATWYIEAVFPGQYGIPRPWYFVFQLKYWGGALMEAGLPIPPAPIDEGDNRIEAEPSDLI
LGVAIHNLVKIYKKGAKLAVNHLSVKFFEGQITSFLGHNGAGKTTTLSILTGLFPPTAGS
VYIKGMDIRTDMNEIRRTLGVCPQHNVLFDMLTVEEHVWFYGHMKGMSSSEVKEEMASLL
EDVGLTHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVILDEPTAGVDPYSRRGIWDLLLK
YRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKELQS
RTPTSASGKLLAAVNDTDSTRSDDTGLGSEVNSSVISGLVALAQHYVSGARLVEDVGREV
VINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVAEETGVDAEPDEA
ATPPAVSPSQQGEPPEDRDAGWKRQSRTEAQETDPLSGDGRGSVSLTGWGLTWQQLRALF
TKRLLYATRSRKGFIAQIVLPALFILIDLLFSLIVPPMGKYPALELQPWMYGEQFTFFSN
DAPQDPAMQNLLSALLDPPGFGTKCLASDMEAQCTGENVGTKFNSPQIPFSTWKLFNSPN
WTMEHPSPDCMCSTEEVRRMLPDCPEGAGGLPPPQIKRLTGDILQNLTGRNISDYLMKTY
PQILKKSMKTKKWVNEFRYGGFSLGAKGSQTLIGSLQLEESVMAIRKQYKIAENSSLDQL
LDRLPDLFTDLNSQNNVKVWYNNKGWHAMVSFVNIMNNGLLRASLPPGPERQKHGITAYN
HPLNLTKEQLSDMVLMTTSVDVLLSISVIFAMSLVPASFVLFLIEERVSKAKHLQFVSGV
KPILYWTANFVWDMLNYTVPATLVVLIFIGFQQQAYVSEKNLPALVLLLLLYGWAITPLM
YPASFVFSVPSTAYVTLTSINLFIGINGSIATFVLELFTNEHLREVNRILKKVFLIFPHF
CLGRGLIDMAKNQAMADALQRLGTKQTLEPLEWDFVGKNLFAMAVEGVVFFIFTILLQYK
FFIRCRLPWFEPVLPPLCAEDEDVGRERDRVKNGRTQDDILTLIDLSKVYKSGKKPAVNR
LCLGIPRGECFGLLGVNGAGKTSTFLMLTGDTSVTCGEAFLCNHSVLTEMDRVHQLMGYC
PQFDAINELLTGREHLEFYARLRGVPEAYVAKVAQWGVKKLGLTHYADREAGGYSGGNKR
KLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVIKEGRAVILTSHSMEECEALC
TRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPPKDPCPVDAYIKNSFPGIELKER
HHNVLQYQLPSNSCSLARVFDVLSNNYEELGVTDYSISQTTLDQVFVNFAKEQTDDDDQL
SGVTVNGGLVAAQTSRPQSRRSIQPHPTTQQSTPSPSASPEPSRSPSPVSAAQPSRPQSP
NKSSQPKAGGSKNKEGKRSVLSEAKQPQQIQMQPMLDSSGSGQKRSDGDRSRSKDPAKLF
LVKPKPQDSNL
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggccataggaacccagctgtacctcctgctgtggaagaacttcacctaccgcagaaga
aataagttccagctgatcactgaactgctctggccactcttcctattcctcatcctcatc
tccgtacgcaactctcacccaccctacaaacagagccagtgccacttccccaacaaggca
ctcccatctgcaggcactttagcatgggtgcagggcattgtttgcaatgttaacaaccca
tgcttccactaccaaactccaggggagagaccgggacaactggcgaactttgataactcc
ttaatctctcgattgttagtggatgctggacatatcctcaccaacacaagtgactggaca
gccctcacagatgacctttctcttgctgttcagagactggccgagagacaggatgcctgg
ccaaatttcccagtgggagaatacctcagagcaaacgagacattttcttccttcctgcgt
accaactgcagcattccctccaactctgtggatcacctgatgaaggcacgactcaacctc
caggttgctctgacaggatcgggattacgtctgtctgaaatcgtctgtaatgccactctc
ttgggccgttacctcacaatggaaggaaacacctcctttactcacctgcagagagacttg
tgtgctgttccctcagatttgctgcagcaagccgaacggatatttctctcacagatggac
tttagaaagattttcacgagggagcgtctcctctccagtgctgccgacctacaggtgctc
agccaggcaaccgcctctgcagctcaggaactggcctccattatggataatatatacact
ctgtcaagcttctctgagctcaacacagatctccggctactgcttcaagagaacagctcg
gctctgccccaaaagcgcttccaagccttctccaggattatgtgtggtcacccagagcag
gacggggagagcattccctcttttaactggtatgaagatcaagacatcaagtctttcctg
ggcaggagccggtcagaggaaaccgacttggaaaacgatacaaccagtccattctgtaaa
agcatgattcaaaacttggaaatgaatcctgtctctcgcattttctggagaggtattaag
ccacttttcattgggaaaattctctacgcgccagatactcctgctacgcgccgtattatg
aaagaggtgaacaggacattccagacgctggacgttctggaagaggtatatggagcatgg
gaggaggtgggacccagaatcaagagattcatggagaacagcctggagatccgactgctg
aaggattttctgaggcggccggaggtggcagtggtggtgaacctgcggctggagaacacc
tcatggacagcgtctcgccttgcccagttcctctctacacctgatccagacactcccagg
agaaaaggagcacctcccacctggctggacctgtatcaggatctcaatagctctcttagc
accttgtcacaagtcacaaagtgtttttcccagaacaaaatggagggattggatacagaa
gatgagatggtagagcgggctctggagctgctggaggatcggcagttttgggctggaatt
gtcttcctccttccagatccctcctcctcaaacctgccccctcatgtcaagtacaagatc
cggatggacgtagatgatgttacacgcaccaataaaatcaaagacaaattctgggaccca
ggcccggctgcagaccccttcagtgacatgcgatacataagaggtggctttgtctatgtg
caggatttagtggagcgagcaataacacaagtactcagcggcaagcaaccatctactggg
atatatgtacagcagatgccctatccgtgcttcgtggatgatgttttcctgcgtgtgctg
aatcgctcactccctctcttcttgacgttggcatggacttactcagtagccatgatcatc
aagtgcgtggtatatgagaaggaagcacggctgaaggagaccatgaggattatgggactg
agctcagggactctctggctcagctggtttgtcagcagctacctgaatttcctcatcagc
tctctgcttctcgtcactgtgctgaaggtgggagacatcttgccctatagtgaccccgcg
gtggtcttcttcttcttgtctgcctttgccacagccaccatcatgctgtgcttcctcatc
agcaccttcttctcccgggccaacctggcagcagcctgtggagaccttgcatacttctcc
ctttacctgccttatgttctgtgtgtgtcctggagggaatacctcaccagcgtacatagg
atcctagctagttttctgtctccagtagcctttgggtttggctgtgagtacctgtctcag
tacgaggagcaagggctgggcatccagtggtccaacatgtggtccagccctactgaagga
gacaaatacagcttatctacctctatcataatgctctatgtggatgcctttatctatgga
gtggccacttggtacatcgaagctgtgtttccagggcagtatggaattcccagaccctgg
tattttgtcttccagctgaaatactggggaggagctctgatggaggctggtttgcccatt
cctcctgcacctatagatgaaggagacaatcgaattgaagctgagccatctgatctaatc
cttggtgtagccatacataacttggtaaagatttataaaaagggagccaaacttgctgtc
aatcatctgagcgtcaagttctttgaggggcaaatcacttcgttcctgggtcacaacgga
gctggcaagacaaccacactgtctatcctgacagggttgtttcccccaactgctggttcg
gtgtatattaaaggcatggacatccgcacagacatgaacgaaatccgcagaacactggga
gtgtgtccccagcacaatgtcctcttcgatatgctgactgtggaggagcatgtgtggttc
tatggtcatatgaaaggcatgagcagttctgaagtaaaggaggagatggcctccctgctg
gaagatgtgggactaacacacaaacgccacgaacagaccaagaacctctcaggcggcatg
cagaggaagctctcagtggctatagccttcataggagggtcaaaggttgtgattctggat
gaacccactgctggtgttgacccctattctagacgtgggatctgggatctgctgctcaaa
taccgcaaagatcgtacaatcattctgtctacacactacatggatgaggctgatcttctg
ggtgaccgtatcgccatcatctctcaggggaagctgtgttgctgtggctcttcactcttt
ctaaagtcacacctgggcacaggttactacctcactgcggtaaagaaggagctccagagc
cggacgccaaccagcgccagtggaaagcttttggcggctgtaaatgacacagattctacc
aggagtgatgacactggacttggaagtgaggtcaatagttcagttataagtggccttgtg
gctctggctcagcactacgtctccggggcccggctggtggaggacgttggcagggaggtg
gtcattaacctcccacatgctgcttctgaggatggcactctggccctcttcctggcagag
ctggacaaacgtcaggccgaatttggcatcatcagttacggcctctcagacaccacgcta
gaggagatctttctgaaggtggcagaggagaccggagtagatgccgagccggatgaggca
gccaccccacctgctgtgtctccaagccagcagggggagccacctgaggacagagatgca
ggatggaaacgtcaaagcaggacagaggcccaggagacggatccactgagtggtgatggt
cggggcagtgtgtccctcacaggctggggtctgacctggcaacagctcagagctctcttc
accaagaggcttctgtatgctacccgcagccggaaaggcttcatagctcagattgtgctg
cctgcattgtttatcctgattgatctgctgttcagcctcattgtcccacccatgggaaag
tatcctgctctggagctgcagccatggatgtatggcgaacagtttacattcttcagtaat
gatgctccacaagacccggccatgcagaacctcctcagtgctcttttggaccctcctgga
tttgggaccaaatgcttggcctcagacatggaggcccagtgtacaggggagaatgtcggg
accaagttcaattctcctcagatcccctttagcacgtggaagctgtttaactctcccaac
tggacaatggagcacccttctcctgactgcatgtgcagcactgaggaagttcgcagaatg
ctgcccgactgtccagagggagcaggaggattacctccaccacagataaagagattgact
ggtgacatactgcagaatttgacagggcgtaatatatctgactacctcatgaagacttat
cctcagattttgaaaaaaagcatgaagacgaaaaaatgggtaaatgagttcaggtatgga
ggattttctctgggtgctaaaggttcacagactctgattggctctcttcagctggaggag
tctgtaatggctatcagaaaacagtacaaaatagcagagaacagttccctggatcagctt
ctggacagattaccggacctcttcactgacctcaatagtcaaaacaatgtcaaggtgtgg
tataataacaaaggttggcatgcaatggtgtcatttgtcaacatcatgaacaacggactg
ctgcgggcaagccttcctcctggaccagaaagacagaagcatggaataactgcctacaac
caccctctgaatctcaccaaggagcagctgagcgatatggtcttaatgaccacctcagtg
gacgtcctgttgtccatatctgtgattttcgccatgtctcttgtgccagcgagttttgtg
ctctttctgattgaggaaagggtcagcaaggctaaacatctccagtttgttagtggggtc
aagcccattctgtactggactgcaaactttgtctgggacatgctgaattacactgtgcca
gccaccttggtggttctcatcttcattggcttccagcagcaggcctatgtatcagaaaag
aaccttcctgcgctagtgctgttgcttctgctgtatgggtgggccatcactcctctcatg
taccctgcctcgtttgtgttctctgtgcccagcacagcctacgtgacacttacctccatt
aacctttttattggcatcaatggaagcatagccaccttcgttttggagctcttcaccaat
gagcatttaagggaggtcaacaggattctaaaaaaggtctttctgatctttcctcacttc
tgtttgggtcgaggtcttattgacatggccaaaaaccaggcgatggcagatgctctccag
aggcttggcaccaagcagaccctggagccattggagtgggattttgttggaaagaatttg
tttgccatggctgtggagggcgtcgtcttctttatttttactatacttttacagtataaa
ttttttatacgttgcaggctgccatggtttgagcctgtcctgccgcctttgtgtgcagag
gatgaggatgtagggcgtgagagagatcgggtgaagaatggaagaactcaagatgacatt
ctcactcttatagacttaagcaaggtgtataaatccggcaagaaaccagcagtgaatcgg
ctttgtcttggcattcctcgaggagagtgcttcggcctgcttggggttaacggggctgga
aagacctctactttcctcatgttgactggggacaccagtgtaacctgtggagaagctttc
ctctgcaaccacagtgtgctaactgagatggatagggtccatcagcttatgggctactgt
cctcagtttgatgctatcaatgaacttttgactggaagagagcacctggagttctatgct
cgattgaggggagttcctgaagcatatgtggcaaaggtcgctcagtggggggtgaaaaag
ctgggactgacacactacgctgaccgagaagcaggaggctacagtggaggcaataaacgc
aaactctcaacagccatttctcttattggagctccgccagttatttttctggatgagcca
acaacaggaatggacccaaaggctaagcgtttcctatggaactgtattcacagcgtcatc
aaagaaggccgagctgtcattctcacatcccacagtatggaggagtgtgaggcactctgc
actcgtatggctataatggtcaatggcaggttccagtgcctaggttcagtgcagcatctc
aagaacagatttggagatggctacactattattcttcgcctgtctgcacccccaaaggat
ccctgccctgtggatgcttacatcaagaactcttttcctggaatagaactaaaggaaaga
caccacaatgtcctgcaataccagctgccatctaattcctgctcccttgcacgtgtgttt
gatgttctgtccaacaactatgaagaactaggagtaacagactattcaatctctcagacc
actctggaccaggtatttgtcaactttgccaaagagcagacggatgatgatgaccagcta
agtggagtaactgtaaatggtggattggtggcagctcaaaccagcagacctcaatccaga
cggagtatccagcctcatccgaccactcaacaatctacaccttctccaagtgcttctcct
gaacctagcaggtcaccctctccagtcagtgcagctcaaccatcccgcccccaatcaccc
aacaaatccagtcagccaaaagctggaggctcaaagaataaagaaggtaaacgtagtgtc
ctttcagaagcaaagcaaccgcagcagatacaaatgcagcctatgctggattcttcaggc
agtggacagaagcgctcagatggagatcgctctcggagtaaagacccagccaagctcttt
ttagttaaacctaaaccgcaagacagcaatttgtga
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integrated database retrieval system
