Astyanax mexicanus (Mexican tetra): 103039376
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Entry
103039376 CDS
T05042
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103039376 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103039376 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103039376 (snw1)
Spliceosome [BR:
amex03041
]
Complex B
Other components
Prp19-related factors
103039376 (snw1)
Complex C
103039376 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
103039376
NCBI-ProteinID:
XP_007241899
Ensembl:
ENSAMXG00000009141
UniProt:
A0A8B9J601
A0A3B1JN73
LinkDB
All DBs
Position
1:complement(54937841..54944398)
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AA seq
536 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLESEERTRAQRSQSTSLMLTRREPPPYGSRKGWVPRSIEDFGD
GGAFPEIHVAQYPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQSQGKDKVIFSKYTDLL
PKEVLNDDAPELQRPDEEAIKELTEKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKGHGEKGGEDGEARERDEIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPHTSSEAQYDQRLFNQSRGM
DSGFAGGEDETYNVYDQPFKSGRDMAQNMYRPSKNADKDMYGDDLDTLMQSSRFVPDREF
SGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSASGRSKDYDHEKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccagttttttacccgcgcccactcagctgtcccaggaccagcttgagtca
gaagagaggaccagagctcagaggtcccagtccacatctctgatgctcactcgaagagaa
ccacctccctatggttctcgaaaaggatgggttccccgcagtattgaggattttggagat
ggtggtgcattccctgagatccacgtggctcagtatccactggagatgggcagaaaaaag
aagacatccaatgcccttgctgtacaggtggatgctgagggcaaaataaagtatgatgca
attgctcgacaaagccaaggaaaggataaggttatattcagtaaatacacagatttgctt
cctaaagaagtgctcaatgatgatgccccagagttacagagaccagatgaagaggccatt
aaagagcttacagagaagaccagagctgctttggacaagcaggtttcccagaaaattgct
gcagcaatgcctgtacgtgcagcagataaacaggcaccagcacagtacatacggtacaca
ccttctcagcagggagtagcattcaactcgggggccaagcaaagggtcatccgtatggtg
gagatgcaaaaagatccaatggaacccccacgttttaaaattaataagaaaattcctcgt
ggacctccctctcctcctgctccagttatgcactctcccagtagaaagatgacggtgaaa
gaacaacaggagtggaagattcctccatgcatttccaactggaagaacgcaaagggttac
acaatcccactggataaacgtcttgctgctgatggaagaggtcttcagacagttcatatt
aatgagaactttgcaaagttagctgaagctctctacattgcagatagaaaggccagagaa
gcagtggagatgcgcgcccaggtggaaaagaagatggcacagaaggaaaaagaaaagaag
gaggagaagcttagggagcttgcgaagatggcgcgagacagaagagcagggatcaaaggc
catggagaaaaaggtggtgaggatggtgaagccagagagcgtgatgagattcgtcatgac
aggaggaaagagagacagcacgatagaaacatctccagagcagcccctgataaaaggtct
aaactgcagcgggaccaagaccgagacatcagtgaactgattgcgctgggccagcccaac
ccccacacctccagtgaggctcagtatgaccagaggctgttcaaccagagcaggggaatg
gatagtggctttgctggaggagaagatgagacatataatgtgtatgaccagccctttaag
agtggcagagacatggcacagaacatgtacaggcccagcaaaaatgcagacaaggatatg
tatggagatgacctggacacacttatgcagagcagcaggtttgtacctgatagggaattc
tctggcactgaccatggacctcgcagggatggacctgtccagtttgaggaggatcctttc
ggtctggataagttcttggaggaagccaagcaacacggtggctccaaacggccgtccgct
agtggccgctctaaggactatgaccatgagaagaagcgcaggaaggagtga
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