Astyanax mexicanus (Mexican tetra): 103039385
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Entry
103039385 CDS
T05042
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103039385 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103039385 (gtf2b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103039385 (gtf2b)
Prokaryotic type
Archaeal type
TFB
103039385 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
KIF9
Motif
Other DBs
NCBI-GeneID:
103039385
NCBI-ProteinID:
XP_049322915
Ensembl:
ENSAMXG00000038648
LinkDB
All DBs
Position
18:40924801..40932928
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AA seq
316 aa
AA seq
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MASTSRADALPRVQCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctactagccgtgcagatgctctccccagggtgcaatgccccaatcaccccgag
gctatactggtggaggactacagagcaggggatatgatctgtccagaatgtggcctggta
gtaggtgatcgcgttattgatgtgggttccgagtggaggacgttcacaaatgaaaaagcc
actaaagacccgtcccgtgtgggagacgcgcagaatcctctgctgaatggaggagatctc
actaccatgatcagcaagggaacgggagcagcaagttttgacgagtttggcaactccaag
taccagaaccgtagaaccatgagcagctctgacagagccatgctaaatgccttcaaagag
atcagcaccatggctgaccgcatcaacctgcccagaaacattgtagatcgtacaaataac
ttatttaagcaggtttatgagcagaagagccttaagggtaggagtaatgatgcgatcgcc
tcggcctgcctctacatcgcctgcagacaggagggcgtgcccagaacttttaaagagatc
tgtgccgtgtcccgtatttcgaagaaggagattggtcgatgctttaagctgattctgaag
gccctggagacgagtgtggacctgatcaccacgggagacttcatgtcccgcttctgctcc
aacctggggctgcccaaacaggttcagatggccgccacctacatcgcccgtaaggcggtg
gagctggacctggtgccgggccgcagccccatctctgtggcagcagccgccatttacatg
gcctctcaggcctcggccgagaagaagacgcagaaagaaatcggagatatcgcaggagtg
gccgacgtgactatccgccaatcttaccgtctgatctacccgcgagctgctgacctcttc
cctcccgacttcaaattcgacacaccagtggacaaactgcctcagctgtga
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