Astyanax mexicanus (Mexican tetra): 103039470
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Entry
103039470 CDS
T05042
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103039470 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103039470 (kcnma1a)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103039470 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
103039470
NCBI-ProteinID:
XP_007240363
Ensembl:
ENSAMXG00000001588
UniProt:
A0A8B9RAP3
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All DBs
Position
7:complement(29418288..29676737)
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AA seq
1230 aa
AA seq
DB search
MLAVADGNVSYGSSGGSRMSNNINYNKNPDSSVSISKMDVIIPFSSDVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKQEAQKVINAQTDGPVKNQDEKDE
APASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQPLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITD
PKRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMRHDPLLIPGNEQIENMDV
NVKRYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPL
RASNFHYHELKHIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCV
ILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPV
HGLVRQASVTTGSNIPIITELAKPGKLLPLVSFSQEKNSGTNIQMITELVNDSNVQFLDQ
DDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALL
AEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFG
IYRLRDAHLTAPSPCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSHSSHSSHS
SSKKSSSVHSIPATNRQNRSSKAREARDKHNATRMNRMGQEKKWFTDEPENAYPRNIQIK
PMSTHMANQVNQYKSTTSLIPPIREVEDEC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtggcagatggcaacgtttcctatggcagcagcggcggctctagaatgagt
aataatatcaactacaataaaaacccggactcctctgtctctatctccaagatggacgtg
atcatcccgttctcatcagacgtaccgtgtgacaacaatggtcagcgcatgtggtgggct
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctcttgtggagg
accctcaagtacctgtggaccgtctgctgccactgtaacatcaaaaacaagcaggaggca
cagaaggtgattaacgctcagacggacgggccagtgaaaaaccaggatgagaaggacgag
gctccagccagtgaggtgggctggatgacctcagtaaaagactgggccggggtaatgatc
tcagcgcagactctgacaggcagagtactggtggtgttagtctttgcgctcagtattgga
gctcttggaatatacttcatagactcgtctgaccctatagaatcctgtcagaatttctac
aaagacttcacgttacaaatcgacatggcattcaacgtgttcttcttactctactttggg
ctgcgtttcattgcagccaacgataagctgtggttctggctggaggtgaactccgtggtg
gacttcttcactgtgccgccagtgtttgtatcagtgtatctgaacaggagctggctgggt
ctgagatttctaagagccttgagattgatacagttctcagaaatattacagtttttgaat
atcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcaca
tggctcacagctgcaggattcattcatctggtggaaaactcaggggatccttgggaaaac
ttccaaaattctcaaccactttcatattgggaatgtgtgtacttactcatggtcactatg
tccacggtgggctacggagacgtctgtgcgaaaaccaccctcggccgccttttcatggtc
ttcttcattctcggcggtctggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggttaatggcagaaagcatatt
gtggtctgtggtcatatcacactcgaaagtgtatccaacttccttaaagacttcctacac
aaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaatctt
gagctggaagccttgttcaaacgtcacttcactcaggtggaattctaccaaggatctgtt
ctcaacccacatgatctggctagggtcaagattgagtcagcagacgcgtgcttgattctt
gcaaacaaatactgtgccgaccctgatgctgaagatgcctccaatattatgagagtcata
tccatcaagaactaccatccaaagataagaataatcactcaaatgttgcagtaccacaac
aaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcgatctgc
ctggctgagctgaaggcaggcttcattgcccagagctgcctggcacagggcctgtccacc
atgctggccaacctcttctccatgaggtcattcatcaagattgaagaagacacatggcag
aagtattacctggagggcgtggccaatgaaatgtacaccgagtacttgtccagtgccttt
gtggggctttcatttcctacagtttgcgagctgtgctatgtgaagctcaaattgttattg
attgctattgaatacaagtctgagcagagagaaagcagaagcagaaagcgtattttgatc
aaccctgggaaccatgttaagatgcaggagggaaccttgggattctttattgccagtgac
gccaaagaggtcaaaagagcatttttctactgcaaagcttgtcacgatgacatcacagat
cccaaaaggatcaaaaagtgtggctgcaagagactcgaagatgagcatccatcaacgctg
tcacccaaaaagaagcagcgcaacggaggcatgcgaaattcacccaactgctcgcccaaa
atgatgagacatgaccctctcctcattccgggaaacgagcagattgagaatatggatgtt
aatgtgaagagatatgactccacaggaatgtttcactggtgtccatccaaagaaatagag
aaggtcattctgacacggagtgaggcctccatgacggttctgagtggacacgtggtggtc
tgtatatttggggatgtcacgtccgccttggtggggctgcgaaacttggtgatgccttta
cgagcgagtaactttcattaccacgagctgaaacacatcgtgtttgtgggctcgctggac
tatctgaggagagaatgggaaacgcttcacaacttccctaaagtctccatattacccggt
acgccattaagtcgagctgatttaagggctgtcaacatcaacctctgcgacatgtgcgtt
atcctgtcagccaatcagaacaatatcgacgatgcttcactgcaggacaaggaatgcatc
ttggcatcgctcaacatcaaatctatgcagtttgatgacagcattggggtcttgcaggct
aattcccaaggtttcacaccacctggcatggacaggtcatctccagacaacagtccagta
catggcttggtccgccaagcgtctgtcacaaccggctccaacatcccaatcattactgaa
ctagctaagcctggcaaactactgcctttggtttcattcagtcaggaaaaaaacagtgga
accaacatacaaatgataacagaactggtgaatgactcgaatgttcagttcctggaccaa
gatgacgatgatgacccggatacggagctctatctgacccagccttttgcctgtgggacc
gcctttgctgtcagtgtgctggactcacttatgagtgcgacatacttcaacgataatatc
ctcacgctgatccggacgttggtcacgggaggtgccacgccggagctggaggcgctgctg
gcggaggaaaacgcgctgcgcggaggttacagcacgccgcagacgctggctaacagggac
aggtgtcgggtggcccagctggccctgtacgacgggcccttcgcagacttaggggatggc
ggctgctacggggacttattttgtaaagcattaaaaacatacaacatgctgtgctttggg
atctatagattaagagacgcgcacctaactgcaccgagcccgtgcacgaaaagatatgtc
atcaccaaccctccctacgagtttgagctggtccccacagacttgatcttctgcctgatg
cagtttgaccacaatgcgggccagtctcgaaccagccactcctctcattcctcgcactcg
tccagcaagaagagctcctctgttcactccatcccagccaccaaccggcaaaaccgcagc
agcaaggcccgcgaggcccgagacaaacacaatgcaacaaggatgaatagaatgggccaa
gaaaagaaatggtttacagatgaaccagaaaatgcctacccaaggaacattcaaatcaag
ccgatgagcactcacatggccaatcaagtcaatcagtacaaatccactaccagcctgatt
ccacctatcagagaagtcgaagatgaatgctga
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