Astyanax mexicanus (Mexican tetra): 103039517
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Entry
103039517 CDS
T05042
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K25705
protein SIX6OS1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103039517
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
103039517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S6OS1
USP8_interact
ATG16
DUF1664
DUF948
Motif
Other DBs
NCBI-GeneID:
103039517
NCBI-ProteinID:
XP_022535894
LinkDB
All DBs
Position
11:complement(40196392..40202484)
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AA seq
458 aa
AA seq
DB search
MEDQTGLTGLDNLLLQLALETRELSQKKEELKQQIQIYRSSIQTKKQHIEETQKNIKKLD
EEISQKQKTVKCFKENVKSLRGTNNLLLQYEKTLESELERRQDSCNQDMKLFQERIDNYR
NVFQQYKEEYCKNPLAKQLLKFQAENEEMEKRIRAKEEEMIAKEKVLNTLKEDHSACESG
ERPSQSQDAALPPESDFQPQADTAIHDELPPQGTEAEQDILTEMEEKTMEKKEDQADGFD
ASNASQVGALGSTVWTKPDLSCDLIQEAQQKQQEQAADVQDFHMNTSFGPDVMEEMMKGM
EVEDQQEHEEAVDKESTNEGAAPSSPVRMSAALNTPTFSLNSSPSTSPGRRQSSEGAAFV
FSVHSDPSTPGFSGFGCNFDVGSNPSEESPLKFTSPYFSSKKSPETKLPGFLFDEMEGRQ
EEEFAFSFGAKSPQPSTSSQEEGGTGDPFPFSFSFGKF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccagactggtttaacaggtttggacaatctgctgttacagttagctctagag
actcgagaattatcccagaagaaggaagagctaaaacagcaaattcaaatttatagatcc
agcatacaaacaaagaaacagcacattgaggaaactcagaagaatattaagaaattagat
gaagaaatctcgcagaagcagaaaactgtgaagtgtttcaaagaaaatgtgaagagcctg
cgtggaacaaataaccttctacttcagtatgaaaagacactggaatctgagctagaaagg
agacaggacagctgcaatcaggacatgaaattgtttcaggaaagaattgataactacagg
aacgtatttcagcagtacaaagaggaatattgcaaaaatcccctggctaaacaactccta
aaatttcaagcagagaatgaagaaatggagaaaagaattcgagccaaagaggaggaaatg
attgcaaaagaaaaagtgctaaatactctaaaagaggatcacagtgcatgtgagagcggt
gaaagaccatctcagtcacaagatgcagcactgccacctgagagtgactttcagcctcag
gctgatacagccatacatgatgagcttccaccacagggcacagaagcagagcaagatatt
ctaactgaaatggaagagaagactatggagaaaaaagaggaccaggcagatggctttgat
gcgtctaatgcctctcaagtgggcgcacttggcagcacagtttggacaaagccagattta
agttgtgatctaattcaagaggcacagcagaaacaacaagagcaagcagctgacgtgcag
gatttccatatgaacacctcgtttgggcctgatgtcatggaggagatgatgaaggggatg
gaggttgaagaccagcaggaacatgaagaagctgttgataaggagagcactaatgaggga
gcagccccatcatctcctgtcagaatgtctgcagctctcaacaccccaacattctctctg
aatagcagccccagtacttcacctggccgccggcagagttcagaaggagcagccttcgtt
ttctctgtgcactcggatccaagcacacccgggttctctggatttggctgcaactttgat
gtgggatcaaatccaagcgaggagtcgcctcttaaatttacaagcccttatttcagcagc
aagaagtcccctgaaacaaagttaccaggctttctgtttgatgagatggagggtcgtcag
gaagaggagtttgcattttcttttggggcaaagagtcctcagcccagcacctccagccaa
gaggaaggaggcactggagatcccttccctttctccttcagctttggaaagttttag
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