Astyanax mexicanus (Mexican tetra): 103039524
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Entry
103039524 CDS
T05042
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
amex04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103039524 (gabra6a)
04082 Neuroactive ligand signaling
103039524 (gabra6a)
04519 Cadherin signaling
103039524 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103039524 (gabra6a)
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103039524 (gabra6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
103039524
NCBI-ProteinID:
XP_007253692
Ensembl:
ENSAMXG00000018951
UniProt:
A0A8B9JAJ5
A0A3B1KFT1
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All DBs
Position
2:complement(72045842..72076941)
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AA seq
436 aa
AA seq
DB search
MDNILTLLCLISISTYTGSQKISSENITRILDRLLEGYDNRLRPGSGVSVTEVKTDIFVT
SFGPVSDVEMEFTLDMFFRQMWVDKRLAFEGPIEILRLNNRMLDKIWTPDTFFRNAKKSL
AHNMTSPNKMFRIMQNGTVFYTMRLTISAECPMKLMDFPMDGHICPLRFGSYAYTNREII
YTWRKGLEASVDIPPESSNLLQYDLTGHTLSSETFKISTGHYSVKVVHFVLQRKLGYHLI
QTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDW
FIAVCFAFVASALVEFAAVNYFSTLEANRMRRRVSRGSVLESIAEGSDDEEDSVSQTSVG
GRVRKRMGSISEPPKTRLPIFLQQGSAVPQNMSLAGTSPIDQYSRILFPLAFAIFNIIYW
YIYLSKDTIEKSREID
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattttaacattattatgtttgattagtattagcacttatacgggaagccag
aagatcagctcagagaatatcacgcgcattctggaccgacttctggagggctatgacaac
cggctgcgtcccggatcaggagtgtcagtaactgaagtgaaaacagacatattcgtcacc
agctttggcccggtgtcagatgttgaaatggagttcactttggacatgttcttccgtcaa
atgtgggtggacaagaggttggctttcgagggtcccattgagatcttacgcctgaacaac
cgcatgctggacaagatctggacgcctgacacttttttccgcaacgcgaagaaatctctg
gcacacaacatgacctcacccaacaagatgttccgcatcatgcagaacggcaccgttttc
tacaccatgaggctgaccatcagtgcagaatgcccaatgaaactgatggacttccctatg
gatggacacatttgtcctctccggtttggaagctatgcctacacaaaccgtgagatcatt
tacacctggaggaagggtctggaggcgtctgtggacatcccacccgagtcctctaatcta
ctgcagtatgatctaaccggacatacgctgtccagtgaaacatttaagatcagcacaggc
cattattccgtcaaagttgttcattttgtcctccagaggaaactgggataccatttgatc
caaacctacattcccctcatcatggtggtggtgctgtcacaagtggccttctggatcaac
aaggagtcggtccctgctcgcactgttgccggaatcaccacagttctgaccatgaccacc
ctgagcatcagcgcccgctcctccctgcccaaggtatcgtacgccacggccatggactgg
ttcattgcggtctgctttgcgttcgtagcctctgctctggtggagtttgctgcagttaac
tacttttctactctggaggccaacagaatgagacgcagagtctccagaggatccgtgttg
gagtccattgctgagggcagcgatgatgaagaagactcggtgtcacagaccagtgttgga
ggccgggtaagaaagaggatgggctccatctctgaaccccccaaaacccgcctacccatc
ttcctccagcagggctcggccgtaccccaaaacatgtcgctggcagggaccagccccatt
gaccagtactcccgcatcctcttcccactggcctttgccattttcaacatcatctactgg
tacatttacctcagcaaggacaccatagagaaatccagggagatcgactga
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