Astyanax mexicanus (Mexican tetra): 103039534 Help Entry 103039534         CDS       T05042                                  Symbol hmgb1a Name (RefSeq) high mobility group protein B1a   KO K10802   high mobility group protein B1 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03410   Base excision repair amex04140   Autophagy - animal amex04217   Necroptosis Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     103039534 (hmgb1a)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     103039534 (hmgb1a)   09143 Cell growth and death    04217 Necroptosis     103039534 (hmgb1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:amex03036]     103039534 (hmgb1a)    03400 DNA repair and recombination proteins [BR:amex03400]     103039534 (hmgb1a)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:amex04147]     103039534 (hmgb1a) Chromosome and associated proteins [BR:amex03036]  Eukaryotic type   Nucleosome assembly factors    HMG (high mobility group) proteins     103039534 (hmgb1a) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      103039534 (hmgb1a)    MMR (mismatch excision repair)     Other MMR factors      103039534 (hmgb1a) Exosome [BR:amex04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    103039534 (hmgb1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36 Ets Motif Other DBs NCBI-GeneID:  103039534 NCBI-ProteinID:  XP_007235469 Ensembl:  ENSAMXG00000029194 UniProt:  A0A8B9HGH1 A0A3B1KFE1 LinkDB All DBs Position 20:14353181..14356195 Genome browser AA seq 204 aa AA seqDB search MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFE EMARLDKARYEREMKNYVPPRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS IGDVAKKLGEMWNKTSAEEKQPYEKKAAKLKEKYEKDIAAYRKGKVVGGAAKAPSKPDKA NDDDDDDDDDEEDDDDDDEDDDDE NT seq 615 nt NT seq  +upstreamnt  +downstreamnt atggggaaggacccaacgaagccaagaggaaagatgtcctcttatgcctattttgttcag acctgtagagaggaacataagaagaagcaccctgacacttcagtcaacttctcagaattc tctaaaaagtgctctgagcgatggaagactatgtcagccaaggaaaaaggcaagtttgag gaaatggctagacttgacaaggcacgttatgagagggagatgaagaactatgttcctccc agaggtgagaagaagaagaggtttaaggaccccaatgcccctaagagacccccgtcagcc tttttcattttctgtgcggaataccggcccaaggtaaaggaagagaccccaggtctgtct attggagatgtggccaagaagcttggagaaatgtggaataagacttctgctgaagagaag cagccttatgagaaaaaggcagccaagctgaaggaaaaatatgagaaggatattgctgca tatcggaagggaaaagttgtggggggtgctgcaaaagcccccagtaagccggacaaagcc aatgacgacgacgatgatgacgacgacgatgaggaagacgatgatgatgatgacgaggat gatgatgatgaataa

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