Astyanax mexicanus (Mexican tetra): 103039547
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Entry
103039547 CDS
T05042
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103039547
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
103039547
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
103039547
NCBI-ProteinID:
XP_022534685
Ensembl:
ENSAMXG00000012022
LinkDB
All DBs
Position
4:45919455..46025110
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AA seq
1073 aa
AA seq
DB search
MERAELSSSSSSSSEVVMQKKSAASSRAQSRVDDSGTRASNHAATEEAEDGEGEAKLQPA
RLKRGGGGGGGGGSIRMKNFSAAERKEQPARAGDAPGRNEADDGGGGGGRMTTTPTSSVT
PEVPTNEAPAPSGGTKCNKNGECRRDSGTSSLRSIMSRQDGGPRRAACNSTASADGPGTP
AGDRDHQDKRDPRVSFSNAPSRKASSAAHGGQQPRSSVTFLKSEDGVQAAPAAGTEDGEA
RGSQASFMQRQFGSMLQPGVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWD
FTMLLFMVGNLIIIPVGITFFKDETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEESSDI
ILDPKTIKKKYLKTWFIVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIAMMLLLCHWDGCLQFLVPMLQDFP
SDCWVSLNKMVNDTWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCY
AVFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDE
ESILEELNEPLREEIVNFNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPRDYIIREG
TIGKKMYFIQHGVVNVLTKGTLGMKLSDGSYFGEICLLTRGRRTASVQAETYCRLYSLSV
DHFNEVLEEYPMMRRAFETVAIDRLDRLGKKNSILMHKVQHDLNSGVFNNQENEMIQEIV
KYDREMVKLVDFQRPRAMSMTPSIPGGIFAPPGQSQGASAIATLQQAVAMSFCPQMASPL
VGQGMLQSPRMVRRFQVIQNLSSPVSISPMQVQTPGPTPGGAYASAATSSPPVQSPLAAM
GGRTFQYGCSPMGGRTGSQLSLIQQHVPSPTRASPQKSAHSLQQGGSLSQDARALSASQP
SLPQDGLTTVGPSPPPSTHVSSTSIGPPQVPHPAIPGPSGVRSAVPQRVALSHQTPAAGP
VFPSTLPPAGTPPVVSGAGIVGQGHLDPIVHKKDSIVSLPETDSARSRLSSNL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgctgagctctcctcctcctcctcctctagctctgaagtcgtcatgcagaag
aaaagcgcagcctccagccgcgcgcagagccgcgtggacgactccggcacgcgcgcctcc
aaccacgccgccacggaggaggcggaggacggggagggagaggccaagcttcagcccgcg
aggcttaagcgcggaggcggcggcggcggaggaggaggaagcatccggatgaaaaacttt
agcgctgcggagaggaaggagcagccggcgcgggccggtgatgctccgggacgaaacgaa
gcagacgacggcggaggaggaggaggaagaatgacaacaacaccaacttcatccgtgacg
cctgaagtgccaacaaacgaagcaccggcgccgtccggcggcaccaagtgcaacaagaac
ggcgaatgccggcgggactccggcaccagcagcctccgctccatcatgtccagacaggac
ggtggacccaggcgcgccgcctgcaactccaccgccagcgcggacggacccggcacgccc
gccggagaccgagaccaccaggacaagcgggatccgcgcgtgtccttctccaacgcgccc
agtcgcaaggcgtcctcggcggcgcacggcgggcagcagccgcgcagctccgtcaccttc
ctcaagtctgaggacggggtgcaggcggcgccggctgccgggaccgaggatggcgaggcg
cggggcagccaggccagcttcatgcagaggcagtttgggagcatgctgcagccgggggtc
aacaagttctccctgcgcatgtacggcagccagaaagcggtggagagggagcaggagcgc
gtgaagagcgcggggaactggattattcacccgtacagcgacttcaggttctactgggat
ttcacaatgctgctcttcatggtgggcaacttgatcatcatcccagtgggcatcacgttc
ttcaaagatgagaccaccacgccttggatcatcttcaacgtggtctcggacactttcttc
ctcatggacctggtgctcaacttccgcacaggcatcatcattgaggagagctcggacatc
atcctggaccccaagactatcaagaagaagtatttgaagacctggttcatagtggatttt
gtctcgtccatcccagtggattacatcttcctgatcgtggaaaagggaatagactcggag
gtgtataagacggcgcgggctctgcggatcgtacgattcaccaagatcctcagtttgttg
aggctgctgaggctctccaggctcatccgttacatccaccaatgggaggagatttttcat
atgacctacgacctggcgagtgctgtgatgcggatcttcaacctgatcgccatgatgctg
ctgctgtgccactgggacggctgcctgcagttcctggtgcccatgctgcaggatttcccc
tccgactgctgggtttccctcaacaagatggtgaatgacacttggagtgagctgtactcg
tttgctgtgtttaaggccatgagtcacatgctgtgtataggttacggtcggcaggcccca
gagagtctgtccgatatttggttgaccatgctcagcatgatcgtgggagccacctgctat
gcggtcttcatcggccacgccactgccctcatccaatcactggactcttcacgacgccag
taccaggagaagtataaacaagtggagcagtacatgtcctttcacaaacttccggcagac
ttccgacaaaaaatccatgattactatgagcatcgctaccagggcaagatgtttgatgag
gagagcatcctggaggagctgaatgagccgctcagagaggaaatcgtgaacttcaattgc
cggaagctggtggcctccatgcctctgttcgccaacgccgagcccaactttgtgacagcc
atgctgactaagctccgctttgaggtctttcagcccagagattacatcatccgcgagggc
accatcggcaagaagatgtacttcatccagcacggcgtggtcaacgtcctcaccaaagga
accttagggatgaagctttcggacggctcttatttcggagaaatctgtttgttgacacga
ggtcgcagaacagcgagcgttcaggcggagacatactgccgcctgtactcgctctcggtg
gaccacttcaacgaggtgctagaggagtaccccatgatgaggagagccttcgagactgtt
gccatcgacaggcttgaccgcttgggtaagaagaactccatcctgatgcacaaagtacag
cacgacctcaactcgggtgtcttcaacaaccaggagaacgagatgatccaggagatcgtc
aagtacgaccgcgagatggtaaagctggtggacttccaacgtccacgagcaatgtccatg
acaccttccatccctggaggtatctttgcccctccgggccaatcccagggtgcctctgcc
attgccactctccagcaagcagtggccatgagcttctgcccccagatggccagccctttg
gtggggcagggcatgctgcagtcgcctcgaatggtgcgtcgcttccaggttatccaaaac
ctttccagccctgtgtccatctcccccatgcaggtacagacgcctggcccgactccaggg
ggtgcctacgcttctgcagctacttctagcccgcccgtgcagagcccgttagcagcaatg
ggtggacggacattccagtacggctgtagtcccatgggaggccgcacaggatctcagctg
tccctcatccagcagcacgtgcccagtcccacaagagcatccccgcaaaagagtgctcac
tccttgcagcaggggggcagcctgagccaggacgcccgggctttgtctgcatcccagcct
tcccttccccaggatggcctgacaactgtgggccctagtccaccaccatcaacccatgta
tcctccacatccatcggaccaccacaagtccctcaccctgccattcctgggccttctgga
gttaggagtgccgtgcctcaaagagtggcactgtcccaccagacaccagcagcaggacct
gtattcccgtccactctgccccctgcgggtacccctccagtggtcagtggagcaggaatt
gtaggacagggtcatctcgacccaatagtgcacaagaaagattcaatagttagcctcccc
gaaacagactctgctagatcccggctgtcttcaaacctctga
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