Astyanax mexicanus (Mexican tetra): 103039554
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Entry
103039554 CDS
T05042
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103039554 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
amex04031
]
103039554 (rab40b)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
103039554 (rab40b)
GTP-binding proteins [BR:
amex04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
103039554 (rab40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103039554
NCBI-ProteinID:
XP_007259403
Ensembl:
ENSAMXG00000029896
UniProt:
A0A8B9L957
A0A3B1KAV1
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All DBs
Position
15:complement(33804804..33822207)
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AA seq
288 aa
AA seq
DB search
MGHRTDTSMKMSHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGID
YKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIK
EIDEHAPGVPKILVGNRLHLAYKRQVTTENAQAFAERLGVTFFEVSPLCNFNITESFTEL
ARIVLMRHGMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANG
LNARMMHGRSYSVIASSAKKRNGTKKSKLIYPPLSPSQSCARTSCKIS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggacaccggactgacacatccatgaagatgagccacaggagcagccccgcaaaagcc
tatgatttccttctgaaatttctgctggtgggagacagtgatgtgggcaaaggggagata
ctggccagtctgcaggatggatctagtgaatctccatatggatataacatggggattgat
tataaaactaccactatcctacttgatggacgccgagttaagctgcagctttgggacacc
tctggacagggacgtttctgcaccatcttccgctcttactccagaggagcacagggtgtt
atccttgtatatgacatcacaaatcgctggtcctttgatggaattgacagatggattaaa
gagattgatgagcatgcgccaggagtgccaaagatcctggtggggaaccgtctgcacttg
gcttacaagcgtcaggtgaccactgaaaatgcccaggccttcgcagagaggctaggggtt
accttctttgaggtcagccctctgtgcaacttcaacatcacagagtccttcactgaattg
gcacgcattgttttaatgcggcatggcatggagagactgtggagacccaacaaagtgttg
agtctgcaggacctgtgctgccgatccattgtctcctgcacacccgtgcacctggtagac
aaactcccacttcctgttgccttaaagagccacctcaagtccttctccatggccaacggc
ctcaacgctcgcatgatgcacgggcgctcctactccgtcatcgccagcagcgcaaagaag
aggaacggaacaaaaaaatccaaactcatctacccacccctgagcccgtcccagagctgc
gcaagaaccagctgcaagatatcatag
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