Astyanax mexicanus (Mexican tetra): 103039720
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Entry
103039720 CDS
T05042
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X3
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103039720
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103039720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
DUF6857
Motif
Other DBs
NCBI-GeneID:
103039720
NCBI-ProteinID:
XP_022536671
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All DBs
Position
20:15910614..16066869
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AA seq
710 aa
AA seq
DB search
MRSIRSFGNDDRHVMAKHSTIYPSSEDLEAVQSLVSTVECALKHVSDWLDQSQCSQSNQP
NQQNQPNPPNQPNPPSAPEEEAEAEASADESAEGSTNEGSSSSSSSGGGGGGGGADGGRV
LCGVVRIGLVAKGLLIKEDMDLELVLMCREKPTQTLLSTVCDHLPQQIEKLTEEKYEVQC
CIPEAAILIRSTTEPKLTLKVMLTSPLIREDEEETAQPDSAEASEPADLLDKQRCLVALA
SLRHAKWFQARVNGLKSGVIVLRILRDMCNRVPAWEPLKGWPLELLCEKAIATCNRPLGA
GEALRRVMECLASGILLPGGPGLHDPCEKEPTDTLSGMTDEEAEAVTYSAQHFLRLMAFG
QIYKVLEMDPLPSSKPSQKYPWSDKEGTGLKRPYEDGLMDDKDLIKKMKRNLRKVLDSKA
IDSNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTVYEASGSSKKTAKLH
VAVKVLQAMGYPTGFDTDLDSMSADEKSDSEGKSETSTHSSNNTPHTDSSNTLEVRTQGP
ILTASGKNPVMELNEKRRGLKYELISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKAS
AALAALEKLFSGPNAAGNKKKKILPQTKGVIAAAAAATAVAVQAARGRGRAALARGAFVS
AAAPGYVTPGFGNPYGYSAAAAPAYGLPKRMLLLPVMKVPAYPIPHYSFF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatccgctcgtttgggaatgatgaccgtcacgtgatggccaagcactccacc
atctacccgtcctctgaggacctggaggctgtacagagtctcgtctccaccgtcgagtgc
gccctcaaacacgtctctgattggctggaccagtcccagtgcagccaatccaaccaaccc
aaccaacaaaaccagcccaacccgcccaaccagcccaacccgcccagtgctccagaggag
gaggcggaggcagaggccagcgctgacgaatcagcagaaggaagtaccaatgagggcagc
agcagtagcagcagtagcggtggtggtggtggtggaggtggagctgatggagggcgggta
ctgtgtggggtggtgcggatcggtctggttgctaaagggctgttaataaaggaggatatg
gatctggagctggtgctcatgtgcagagaaaaacccacacagacactactgagcactgtc
tgcgaccacctaccccagcagatagagaagctgacggaggagaagtacgaggtgcagtgc
tgtatccccgaagccgccatcctgatccgcagcaccacagaacccaaactcacactgaag
gtcatgctcacctcaccactgatcagagaggacgaggaggagaccgcacaaccagacagc
gctgaggcgagcgagccggcggacctgctggataaacagaggtgtctggtggcactggcc
tctctgcgacatgctaaatggttccaggccagagtgaacggattaaagtcgggcgtgatc
gttttacggattctgagggatatgtgtaatagagtacctgcctgggagccgctgaaagga
tggcctctggagctgctgtgtgagaaggctatagcgacgtgtaaccgtcctctcggagct
ggagaggctttacgcagagtgatggagtgcctggcctctgggattttactgccaggggga
ccagggctgcacgatccgtgtgaaaaagagccgacggacactctgtcaggcatgacggac
gaggaggcggaggcagttacctacagcgcacagcattttctccggctgatggcgttcggg
cagatctacaaggttttagagatggatccccttccttccagcaaaccctcacagaaatac
ccctggtcagacaaagaaggtacagggcttaaaaggccttatgaagacggtctgatggac
gacaaagacctaatcaagaagatgaaacgcaacttgagaaaagttctggacagtaaagca
atagactctaatcagcccatgaatgctctgatgcggttgaaccagatccgtccggggctg
cagtataagctgctgtctcagtctggtccggttcacgccccagtcttcaccatgtctgta
gacgtagacggaaccgtctatgaagcttccggatcttccaagaagacggccaagctgcac
gtcgctgttaaggtgctgcaggccatgggctaccccacaggcttcgacacggacctggac
tccatgagcgctgatgagaaatccgacagcgaggggaagagcgagacgtctacacactcc
agcaataacacaccacacacagacagctccaacacactggaggtgcgaactcagggtcct
attctgacggcgagtggtaagaacccggtaatggagctgaacgaaaaacgacgaggctta
aaatacgagctgatctcagaaagcggcggcagccacgacaaacgcttcgttatggaggtg
gaggtggatgggcagaagttccgtggggcggggcctaataagaaagtagctaaagccagc
gccgccctcgctgctctggagaaactcttttcaggacccaacgctgctggaaacaagaag
aagaaaatccttcctcagactaaaggagtgatagctgcggctgcagctgctacagccgtg
gcggttcaggcagctcgagggagaggaagagctgcacttgcgcgtggagctttcgtcagc
gctgctgctccaggatacgtcacaccaggttttggaaatccatacggttacagtgctgct
gctgctcctgcatatggtttgcccaagagaatgcttctgttgcccgtcatgaaagtgccc
gcctacccaatcccccactactcattcttttag
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