Astyanax mexicanus (Mexican tetra): 103039772
Help
Entry
103039772 CDS
T05042
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103039772 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103039772 (smarcd3a)
03036 Chromosome and associated proteins [BR:
amex03036
]
103039772 (smarcd3a)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103039772 (smarcd3a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103039772 (smarcd3a)
PBAF complex
103039772 (smarcd3a)
GBAF(ncBAF) complex
103039772 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
103039772
NCBI-ProteinID:
XP_007241244
Ensembl:
ENSAMXG00000000303
LinkDB
All DBs
Position
8:complement(43749836..43790675)
Genome browser
AA seq
516 aa
AA seq
DB search
MATEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPAMDPNRKRPTTTPPVQPPPVQNRPRKKPLGFPGANEVSARQMDLREAQSEPAIGTNA
KRRKMADKILPQRIRELVPESQAYMDLLAFEHKLDQTIMRKRVDIQEALKRPMKQQKRKL
RLYISNTFNPAKPDSDDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPD
PIVINHVIRSRPSVPTSNSVDPNDHKKTACYDIDVEVDDPLKTQMSGFLLSTANQQEIAT
LDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVVGNPEEERRA
EFYNQSWSQEAVSRYFYCKIQQRRQELEQALATRTT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccactgaggattctgctggcggagctcgcaaagccaccaagagtaaactatttgag
tttctcgtccacggagtgcgtccaggcatgacttctggggcccggatgccccatcagggt
gcccctatgggtccccctggacctccgtatggaggaacacccccaatccggccaggaatg
cctaatcctgcaatggacccaaaccggaaacgacccacaaccactccgcccgtgcagcct
ccccctgtccagaatcgacccagaaagaaaccactgggattcccaggagccaatgaggtt
tcagcaagacaaatggacttgcgagaggcccagtcagagccggcaattggaaccaatgcc
aagagaaggaaaatggcagacaagattctccctcagaggatccgtgaactggtgcccgag
tcacaggcatacatggaccttttggcttttgagcacaagctggaccaaaccattatgagg
aagcgggtggacatccaagaggcccttaagagacccatgaagcagcaaaagcggaagctg
cgattgtacatctccaacacattcaaccctgcaaagcctgattctgatgactctgagggc
agcattgcatcctgggagctgcgagtagaaggcaagctgctggatgatcctggaaagcaa
aagaggaaattctcgtctttctttaagagcttggttattgagctggataaggacctgtat
ggccctgataaccacttagtggagtggcaccgtacccccacgacccaggagacggatggg
ttccaggtgaagaggccgggagatgtgaacgtgcggtgcacactgctcctcatgctggat
taccagcctccccagtttaaactggaccccagactggctcgtctgctgggtatccacaca
cagacccgctcctgcatcatccaggcgctgtggcagtatgttaagaccaacaagctgcag
gactcccatgaaaaggagtacatcaactgtgacaagtatttccagcagatctttgactgt
ccacgtctgaagttctgtgagattcctcagcggctcaccaacctgctgcttccacctgac
ccaatcgtaatcaatcacgtcatcaggtcaagaccctctgtccccacatccaacagtgtg
gaccccaatgatcacaagaaaacggcatgttatgacatagacgtcgaggtggacgatcct
ctcaagactcaaatgagtggctttctgctctcgaccgctaatcagcaggagatagcaaca
ctggacaacaagattcatgagaccattgaatccattaaccagctgaagatccagagagac
tttatgcttagcttctccagagatcctaagggctacatccaggactggatctgttcacag
aaccgggatttgaagctcatgacagatgtggtcgggaacccagaagaggagagaagagcg
gagttttataaccaatcctggtctcaggaagctgtcagtcgctacttctactgcaagatc
cagcaacgaagacaagagctcgagcaggccttggctacccgcaccacttag
DBGET
integrated database retrieval system
