Astyanax mexicanus (Mexican tetra): 103039838
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Entry
103039838 CDS
T05042
Symbol
zgc:162200
Name
(RefSeq) protein bicaudal D homolog 2
KO
K18739
protein bicaudal D
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103039838 (zgc:162200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103039838 (zgc:162200)
04131 Membrane trafficking [BR:
amex04131
]
103039838 (zgc:162200)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103039838 (zgc:162200)
Membrane trafficking [BR:
amex04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103039838 (zgc:162200)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
CLIP1
DUF1759
Motif
Other DBs
NCBI-GeneID:
103039838
NCBI-ProteinID:
XP_022526377
Ensembl:
ENSAMXG00000012903
LinkDB
All DBs
Position
12
Genome browser
AA seq
875 aa
AA seq
DB search
MLEEEDLEVAGGGGGGMSLQAEVERLTAELQEANEEKLQAARYGLAVLEESATLKTKHVH
LEEEHEALKLELQQLREALADSVSSQKRAVADGETREECLLQETASKEAAMATRMEELQA
ELKQARLAQANTMAEIERMAIVSTQMKKECECLEAEKAHLRDELKEFKVRELQQLQDNSE
LEEENISLQKQVSVLKENQVEFEALKVDLTQKDEEQDLLRAQLEEAGRLKEIAERQLDEA
LEALKEEREQKNSLKRELAAHTLNPFDSVVHLDLQLDDSLDGGKDKEGGEDGEGDQDSGY
NNSKGGEKQRCSTPRNRDIFLRPQAPGLVADLLSELHLSDSQKLKQQVLQLEKEKGMLTD
TVQDLQEQLVQSKEILDEHKVKVEQLSQRLEAMEGCSNLSASQSRRGEKGASTGPASGPH
QNGVEAKNEDDFYELDAKSAEVLECRMRAANAELMQLRDELREAGNHCKTLDERYKQEKE
RWRAEAQELADKIRQCIAASRQDQERIGQLEREIGATRRVATDSEGHLSATQEELLAFSE
ELANLYHHVCVCNNLTPRRVTLDYYREGARSGRHHHSNTNHHHGAFRKQRRSTEAFGKGV
HSVDVDLERGSGDTSPTCGSCPGSPTMEFRDPTNVRNLVALIRCQIKHLQVAVDLCRQRG
TLPSPSVVSFSESDRDADALLEEVLKLKSLLSTKREQIATLRTVLKANKQTAELALSNLK
TKYETEKTMVSETMVKLRNELKALKEDAATFSSLRVMFASRCDQYVTQLDEMQRQLAAAE
DEKKTLNSLLRMAIQQKLALTQRLEDLEAPLHSHSNGGSPRRSRTKQLSTKSGRAPRSPM
RNSPRASPVMMASTGPQTMSGHLRALSRSLHGSPR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggaggaagatttggaggtggcaggaggaggaggaggaggaatgagccttcag
gctgaggtagagaggttgacggctgagcttcaggaggccaatgaagagaagctgcaagca
gcgcggtatggcctggccgtgcttgaggagagcgctacgctaaagaccaaacacgtccat
ctagaagaagagcatgaagccctcaaactggagctacagcaactccgtgaggccctggcc
gactccgttagcagtcagaagcgtgctgtagcagatggggagactcgagaagagtgtttg
ctacaggagacggccagcaaagaggctgccatggcaacgcgaatggaagagctgcaggcg
gagctgaagcaggctcgtctggcacaggcaaataccatggctgaaattgagagaatggcc
attgtttctactcagatgaagaaggagtgtgagtgtttggaggctgaaaaggctcacttg
agagacgagttgaaggagtttaaagttcgggagcttcagcagcttcaggataacagtgag
ctggaggaggagaacatctctctgcagaagcaagtttctgttctcaaggagaaccaggtg
gagtttgaggctctgaaggtggatctgactcagaaagatgaggagcaggatttgctgcgg
gcccagctggaggaggctggccggctaaaagaaatcgcagagcggcagctggacgaggcc
ctcgaggccctgaaggaggagcgcgagcagaagaacagtctgaagagggagttggctgca
cacactctgaacccctttgactccgtggttcatttagacctgcagttggatgatagtttg
gatggtggaaaagacaaggagggaggagaagacggagagggggatcaggacagcggctac
aacaactccaaaggaggcgagaaacagcgatgctcaacgccgagaaaccgtgacatcttc
ctccggcctcaggctccagggctggtggccgacctgctgagcgagctgcatctctctgac
agtcagaagctcaaacagcaggtgctgcagttggaaaaggagaagggcatgctcaccgat
acagtccaggacctccaggagcagcttgtccagtctaaagagattttggatgagcacaaa
gtgaaggtggagcagttgtctcagcgtttagaagctatggagggttgctccaatttgtct
gcttcgcaatcaagaagaggcgaaaagggggcctctactggcccggcctctggccctcat
cagaacggtgtggaagcgaaaaacgaagatgatttctacgagctggatgctaaaagcgca
gaagtgctggagtgtcgcatgcgggcagccaacgccgagctgatgcagctgcgggacgag
ctaagggaggcgggcaaccactgcaagactttagacgagcggtacaagcaggaaaaagag
cgctggagggcagaggcacaagagcttgcagacaaaatccgccagtgcattgctgcaagc
cggcaggaccaagagcgaattggccagctggaacgggagataggtgctactcggcgggtt
gccactgactcagagggccacctcagtgccacccaggaggagcttctggccttttctgaa
gagctggccaacctttaccatcatgtgtgcgtgtgcaacaacctcacacctaggcgggtc
acattggactactatcgtgaaggagcaaggagcggaagacaccaccattcaaacactaat
catcaccatggggcttttcggaagcagaggaggtcgacggaggcgtttgggaagggagtg
cactctgtagatgtagacctcgaaagaggtagtggagacacttcgcctacttgtggaagt
tgtcctgggtcgcccacaatggagtttagggaccctaccaatgtgcggaacctcgtcgct
cttatccggtgccagattaaacacctccaggtggctgtagacctgtgcaggcagcgtggc
actttgccctccccatcagttgtgagcttctctgaatccgaccgtgatgcagacgcattg
cttgaggaggtgttgaagctgaagtctcttctaagcaccaagagggagcagatcgccaca
ctcaggactgtcctaaaggcaaacaaacagacagcagagctagccctaagtaacctgaag
accaagtatgagactgagaagaccatggtgtctgagactatggtgaagcttaggaacgag
ctgaaggctctgaaggaggacgccgcgaccttctcctcactacgggtcatgtttgctagc
agatgcgaccagtatgtgactcagttggacgagatgcagaggcagctagctgctgcggag
gatgagaagaagacactcaactctctcctccgtatggctatacagcagaagctggccctg
actcagcggttggaggacctggaggctcccttgcactcccacagcaacgggggcagccca
cgacggtcccgcaccaagcagctgagcaccaagtcaggtcgagctccacggagtcccatg
aggaacagcccacgcgccagtcctgtgatgatggcatcaactggccctcaaaccatgagt
ggccatttgagggcgctctcacgcagccttcatggcagccctcggtga
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