Astyanax mexicanus (Mexican tetra): 103039844
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Entry
103039844 CDS
T05042
Symbol
katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103039844 (katnal1)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
103039844 (katnal1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103039844 (katnal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_33
AAA_5
AAA_14
Mg_chelatase
AAA_16
AAA_22
AAA_28
AAA_7
NPHP3_N
IstB_IS21
TsaE
nSTAND3
AAA_17
AAA_2
AAA_18
ORC-CDC6-like
RNA_helicase
Shotoku_capsid
NACHT
Guanylate_kin
Parvo_NS1
PhoH
AAA_24
AAA_25
Zeta_toxin
SLFN-g3_helicase
SRPRB
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
103039844
NCBI-ProteinID:
XP_007235470
Ensembl:
ENSAMXG00000042822
UniProt:
A0A8B9HFB1
LinkDB
All DBs
Position
20:14358109..14373161
Genome browser
AA seq
488 aa
AA seq
DB search
MNLTEICDNAKKGREYALLGNYDSSMVYYQGVLQQIHKHCHSLRDPALKVKWQQVRQELE
EEYEQVSSIVNTLESFKVDKPVDFPNPQPEECPRDPAVWPPPTPAEHRVPAQVKRPNTGM
KPQRKDSPGMQHRGPAGKGQPNAKQDRPGARDARTAKAKEDKGRKGAQEGVGDGEQKKFY
GTGYDSDLVDALERDIVSRNPNIHWNDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWK
GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT
TIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPW
DIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVEVASDVDLAVIAEQIEGYSGADITN
VCRDASMMAMRRRIQGLKPEEIRALSKEELQMPVTMEDFELALKKISKSVSAADLEKYEA
WMNEFGSV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgagatctgtgacaatgctaagaagggaagagaatatgcattgcttggc
aactatgactcctccatggtgtactatcagggtgttctccagcagatccacaagcactgt
cactctcttcgagatcctgcactgaaagttaagtggcagcaggtgcgacaggagctggag
gaggaatatgagcaggtcagcagtatcgttaacactctggagagtttcaaggtggataag
ccagttgactttcccaatccccagccagaagaatgccctagggaccctgctgtatggcca
ccccctacacctgcagaacacagggtacctgcccaggtgaagaggccaaacactggaatg
aagccccagaggaaggactcacctggaatgcagcaccgtgggccagcagggaagggccaa
cccaatgctaaacaggacagacctggtgcccgtgatgcccgcactgcaaaagctaaagaa
gacaaaggcagaaaaggagcccaggagggggtcggggatggagagcagaagaaattttat
ggtaccggttacgacagtgacttggttgatgcactggagagagacattgtgtcaagaaat
cccaatatccactggaatgatatagcagatctggaggatgccaagaagctgctgcgagag
gctgtggtcctgccaatgtggatgccagatttcttcaagggcatccggcgcccatggaag
ggtgtactgatggtgggaccccctggtacaggcaagaccatgctggctaaagctgtagcc
actgagtgtggcaccaccttcttcaatgtatcatcttctacactcacatccaagtatcgg
ggagagtctgagaagcttgtgcggctgctctttgaaatggctcgattttatgcccctacc
actatttttattgatgagattgactctatttgtggaagacgtggcacatcagatgaacat
gaagcaagtcgccgagtgaaatctgagcttctggtacagatggatggggtaggaggtgcg
ttagaaaatgacgacccctctaaaatggtgatggttctggctgcaactaacttcccatgg
gatattgatgaagcactgaggaggagattggaaaagaggatctatattcccctgccaaca
gcaaaaggccgagcggagctgctgaagataagcctgagggaggtggaggtggcgtctgat
gttgacctggccgtcattgctgagcagattgagggctattctggggctgacatcacaaat
gtctgcagggatgcgtccatgatggcgatgagacggcggatccagggcctaaagccagag
gagattcgtgcactttccaaagaagagctgcagatgcctgtcactatggaggactttgag
cttgcacttaaaaagatctctaagtcagtctcagctgctgacctggagaaatatgaggcc
tggatgaacgaattcggctctgtttaa
DBGET
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