Astyanax mexicanus (Mexican tetra): 103039893
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Entry
103039893 CDS
T05042
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103039893 (sox21a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103039893 (sox21a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
103039893
NCBI-ProteinID:
XP_007244263
Ensembl:
ENSAMXG00000025656
UniProt:
A0A8B9R7N0
LinkDB
All DBs
Position
5
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AA seq
236 aa
AA seq
DB search
MSKPIDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNAARKDRYQLNVAYSLGEPDSLKGALLQGDAEKAAA
VAAATRAFLGGHPLPAGPYQHYVDVGLHPKLHSELPASAFPHGSLDYPGRVAAFPAMGVL
GGAAHPHPAPANPGYMLPCSYPSWTASAPHPPIAYVFLPGMSKALHEAYPAYAAAL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcccattgaccacgtgaagcgtcccatgaacgccttcatggtttggtcgagg
gcgcagaggagaaagatggcactggacaacccaaagatgcacaactcggagatcagcaag
cggctgggcggggagtggaagctcctctcggactcggaaaagaggccgtttatagacgag
gccaagcggctccgggcggtgcacatgaaggagcacccggactacaagtacagaccgcgg
aggaagcccaaaaacgcggccaggaaggaccggtaccagctgaacgttgcgtacagcctg
ggggagccggactcccttaagggggcgctgctgcagggcgacgccgagaaggctgcagcc
gtggccgccgcgacccgagccttcctcggcggccaccctctgcccgccggtccgtaccag
cattatgtggacgtaggcctgcaccccaaactacactccgaactgcccgcctccgctttc
ccgcacggctcgctcgactacccgggccgggtggccgcgttccccgctatgggggtcctt
ggaggcgctgcgcacccgcacccagcccccgccaacccggggtacatgctgccctgcagc
tacccgagctggaccgcctccgccccgcatccccccatagcctacgtgttcctgcccggt
atgagtaaagccctgcacgaagcctacccggcgtacgcggcggccctgtga
DBGET
integrated database retrieval system