KEGG   Astyanax mexicanus (Mexican tetra): 103039893
Entry
103039893         CDS       T05042                                 
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103039893 (sox21a)
Transcription factors [BR:amex03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    103039893 (sox21a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 SOXp
Other DBs
NCBI-GeneID: 103039893
NCBI-ProteinID: XP_007244263
Ensembl: ENSAMXG00000025656
UniProt: A0A8B9R7N0
LinkDB
Position
5
AA seq 236 aa
MSKPIDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNAARKDRYQLNVAYSLGEPDSLKGALLQGDAEKAAA
VAAATRAFLGGHPLPAGPYQHYVDVGLHPKLHSELPASAFPHGSLDYPGRVAAFPAMGVL
GGAAHPHPAPANPGYMLPCSYPSWTASAPHPPIAYVFLPGMSKALHEAYPAYAAAL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcgaagcccattgaccacgtgaagcgtcccatgaacgccttcatggtttggtcgagg
gcgcagaggagaaagatggcactggacaacccaaagatgcacaactcggagatcagcaag
cggctgggcggggagtggaagctcctctcggactcggaaaagaggccgtttatagacgag
gccaagcggctccgggcggtgcacatgaaggagcacccggactacaagtacagaccgcgg
aggaagcccaaaaacgcggccaggaaggaccggtaccagctgaacgttgcgtacagcctg
ggggagccggactcccttaagggggcgctgctgcagggcgacgccgagaaggctgcagcc
gtggccgccgcgacccgagccttcctcggcggccaccctctgcccgccggtccgtaccag
cattatgtggacgtaggcctgcaccccaaactacactccgaactgcccgcctccgctttc
ccgcacggctcgctcgactacccgggccgggtggccgcgttccccgctatgggggtcctt
ggaggcgctgcgcacccgcacccagcccccgccaacccggggtacatgctgccctgcagc
tacccgagctggaccgcctccgccccgcatccccccatagcctacgtgttcctgcccggt
atgagtaaagccctgcacgaagcctacccggcgtacgcggcggccctgtga

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