Astyanax mexicanus (Mexican tetra): 103039957 Help Entry 103039957         CDS       T05042                                  Symbol soga1 Name (RefSeq) protein SOGA1   KO K27704   microtubule cross-linking factor Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:amex03036]     103039957 (soga1) Chromosome and associated proteins [BR:amex03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Microtubule-associated proteins      103039957 (soga1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SOGA SOGA1-2-like_CC TPR_MLP1_2 Motif Other DBs NCBI-GeneID:  103039957 NCBI-ProteinID:  XP_015463108 Ensembl:  ENSAMXG00000016752 LinkDB All DBs Position 13:complement(26707669..26810663) Genome browser AA seq 1770 aa AA seqDB search MTKTKADPGSPTHCASSPQGKRSSTMESGTRSGGGEGGAQPPAGEKKKLHRAPSPARPRD VPGWSLTKIRGGIGAPALSVKPGAIHIGSRVSRRSPGAGREPKGEKGKAAGRGGQPSSVA AARSSAKLNRRKTSDASAASDELSKDSGCAPGKLSATDSSSELSDCASEEHRVSADALSS DTETSSRGGAAGERRLRSDGGERLSSGVEAGEESVSPADERSLASLESRVAASTSLAFSD LTEELTDGVHEEYLREIEELRSENDYLKDEMDELRSEMLEMRDMYMEEDVYQLQELRQQL DQANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHSELETVE KKRSRLEQENEEMQVKLQDLEVAKQVLQAELEKSRENSLKKRGARPNNKPDKKASPQPPE DSSDLKCQLHFAKEESALMCKKLTKMVKDNETMKEELAKYRSLYGDVDASLTVEDVADSP HTREAEVRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQETPGGLAVTGSTGQL LLSASAENVMELQRHLQFVEEEADLLRRSLMEMEEQNKLLMNELNRYKSEFPPDAEIEMS PTTILPPVIIPSEMPSEEVPLNEASQEELLAARLQIGDLSGKVKKLQYENRVLLSNLQRC DLASTNIGGRPAMETDAEAGDSAECVPSPEHREGPVGGEGSHPLEEKGVEKVSGSIHANV SQCLSIKDLLAIRDQAQLVTSAIQLLTSADSDSIYRKIAGGEPADAGLMEKNQVQGSNLP LMEALQTRLQALQTQLQMLSQRLDALEESPDKEASPIPLLAQTADTADTQVNQITAHLKP HIREQLDVKSAGAYLCKAEEESNSHKDSNKEQTTDLTETNPALLLKQVWELQEQLGVMKE KAEKAQEELLLERQAFRDHTHSCSQKLSQLQEEHQKALVRRDFQLQSVSLQTRLQQKFWS QERNLLVQESQQLKQSLLLVSLKLRWLLKQWRLGKKLDTEGKDVLEINSVKDLHLLLEDE GLSPHHGDNKMAAAEEQPTSPTTKEHGLPEKIHFQQSSGLSSTLSDLKVALQDLNAELRE ERQSSQELTQQFARAKASWEVERTELKSLITQLEGKATKVSVAEKDHPDLKGALKREREE HQHLLADSYAAVMDLTKQLQISERNWGREKLELLERFNQERNQWELRLRDVQSKGTQSLN DKEKEVSTEATTNGTNGTALQRTKSISSLSELESLLDATPFLPGHEVNGLAGGKAGKHHF GDHTVLLTGTDLTDLNQKNWKYLNNEWACLETAEPFKTWDCPSTSSSTSFPELELSVEHV QRSYTAPDKTGIRIYYSPPAVRRMERRAKEHNPEDAKSGLTSRGAGVCDPTLMSSAVASS ASSSPSSSSYEQWLSSLSQQHRDLLEGRAGVSAPFHGLEISGNLSDDMKEMTNCVRQAIR SSSLERKCSKDAGSQTVGVTSTGTQTAQFVSVGLQTDGPTSSTTRGAGLHGKVWSPRPSS SLASARSRQISSSLEKVHSRIDRPCCSPKYGSPKLTRRVSTSSSKLETSSTSSRDRSVWN LPNRSGSQNGSAWARSTTTRDSPVLSGLNDGLSSLFSVVEHSSSMESLWKGDTCPGKQAA GKPSCPSVGISIGDTGAQKYGIVQEFLRNVCGRTGPAGPGERNGTIDEPKPECLSGALIG TDSVTKIVNKRFMRQTQRDDIVVSSGKDSSTVNTSTSSLEDSSCDCTSQSLTTCFARSSR STVRHTHSQCRHRLQESAPTSEEKLDASNE NT seq 5313 nt NT seq  +upstreamnt  +downstreamnt atgaccaagacaaaggctgaccccggttctcccacccactgcgcctcctcgccccaggga aagaggagcagcaccatggaaagcgggacccgcagcggaggcggtgaaggcggcgctcag cctcccgccggcgagaagaagaagctgcaccgcgccccgtctcccgccagaccgcgggac gtgcccggctggtcgctgaccaagatccgcgggggcatcggcgctccggcgctcagcgtg aagccgggcgccatccacatcggctcccgcgtgtctcgccgcagccccggcgcgggcagg gagcccaagggggagaaggggaaggcggcgggaagaggcgggcagccctcctcggtagcg gcggcgagaagcagcgccaagctgaaccggaggaagacgtcggacgccagcgccgcatcc gacgagctcagcaaagactccggctgcgcgccgggcaaactgtcggccacggacagcagc tcggagttgtcggactgcgcctccgaggagcaccgggtcagcgcagacgctctgagcagc gacacggagaccagcagccgcggaggagcggccggagagcggcgactcaggagcgacgga ggggagcggctctcctcgggcgtggaagccggagaggagagcgtgtcgcccgcggacgag cgctcactcgcctccctggagagccgcgtggctgccagcacctcgctcgccttctctgac ctgaccgaggagctcacagacggggttcatgaggagtatctgagagaaatcgaggagctg cgctcagaaaacgactatctgaaggatgagatggatgagctgcgctccgagatgctggag atgagggacatgtacatggaggaggacgtgtaccagctgcaggagctccgacagcagctg gaccaggccaacaagacctgccgcatcctgcagtaccgcctccgcaaagcggagagacgc agcctgcgtgtcgcccagacaggtcaagtggacggggagctcatccgcacactggagcag gacgttaaggtggccaaggacgtgtccattcgtctgcacagtgagctggagacggtggag aagaagaggagccgcctggagcaggagaacgaagagatgcaggtgaagcttcaggacctg gaggtggccaagcaggtcctgcaggccgagctggagaagagtagagagaactccctaaag aaacgaggagctcggccaaacaacaaacccgacaagaaggcgtcacctcagcctccagag gacagctcggacctgaagtgtcagctccactttgccaaggaggagtcagcgctgatgtgc aagaagctgaccaagatggtgaaggacaatgagaccatgaaggaggagctggccaagtac cgctcgctctacggtgatgtggacgcctccctgaccgtggaggacgtggccgactcgcct catacccgtgaggccgaagtaagggtccacttgaagctggtggaggaggaggctaacctc ctgagccgcaggattgtggaactggaggtggagaaccgcggtctccgggcagaaatggat gacatgaagatccaggagacgcctggaggcttggcggtgaccgggagcactggacagctg ctactttcggcctcggctgagaacgtgatggagcttcagaggcacctgcagtttgtggag gaggaggcggacttgctaaggaggtcactgatggagatggaggagcagaacaagctcctg atgaacgagcttaaccgctacaagtcggaatttcctcctgacgccgagatcgagatgtcg cccaccaccatccttcctcccgtcatcattccctcagaaatgccttccgaagaagtgccg ctcaacgaggcgtctcaggaggagttgctggcagccaggctgcaaatcggcgatctgagc ggaaaggtaaagaagctccagtacgagaaccgcgtcttgctttccaacctccagcgctgc gatctggcctccactaacatcggtggccggcctgccatggagacagacgcggaggccggc gattcggccgagtgcgtacccagcccggaacaccgcgagggtccggtgggaggtgaggga agccaccctctggaagaaaaaggtgtggaaaaggtgtcaggaagcatccatgccaacgtc tcacagtgcctcagcataaaagacctcctggccatccgtgaccaggcccagcttgttacc tcagccatccagctcctcacgtcagccgactcggactcaatctaccgcaaaatagcgggt ggagaacctgctgatgcgggactcatggagaagaaccaggtgcagggctcaaatctgcca ctgatggaggcccttcagaccagacttcaggccctgcaaacccagctgcagatgctcagt cagcgactcgatgctttagaggaatccccggacaaggaggcgtctcctatacccttactg gctcaaactgcagacaccgcagacactcaggtcaaccagatcacggctcatcttaagccc cacattagggagcaactggacgtcaaaagtgccggagcgtacctgtgcaaagccgaggag gagagcaacagccataaagacagcaacaaggagcagacgacggacctgacagagaccaac cctgcactgctgctgaagcaggtctgggagctgcaggagcagctgggtgtgatgaaggag aaggctgagaaagcacaggaggagcttctgctggagagacaggctttccgtgaccacacc cacagctgctcacagaaactctctcagctgcaggaggagcaccagaaggcactggtgcgg cgggacttccaactgcagagtgtgagtctgcagacgcgactgcagcagaagttctggagc caggagaggaacctgctggtgcaggagtcacaacagctgaagcagagcctgctgctggtc agcctcaagctgcgctggcttctcaaacagtggaggctcggcaagaagctggacacggag ggcaaggacgtcctggagattaacagtgttaaggacctccatctgcttctggaggatgag ggcctctcccctcaccatggagacaacaagatggcagcagctgaggaacaaccgacaagc cctacaaccaaagaacacggccttccagagaagatccacttccagcagtccagtggtttg agcagcactttgtcggacctaaaggtggccctgcaggacctgaacgctgaactacgagaa gagaggcaaagctcccaggagctcacgcagcagtttgcccgagccaaggcctcctgggag gtggagcggactgagctcaaaagcctcatcactcagctggaggggaaggcaaccaaggtc tctgtggctgaaaaagaccatccagacctgaaaggagcgctgaagagggagcgtgaagag catcagcacttgcttgcagattcgtacgctgcggtgatggacctgaccaagcagctgcag attagtgagcgaaactggggccgtgagaagctggagctcctggagcgcttcaaccaggag aggaaccagtgggaactgcggctccgtgatgtccagagcaagggcacacagtctctgaac gacaaagagaaggaagtttccacagaagcaacgacaaatggaacaaacggaacagccttg cagaggaccaaatcaatttcctccttgtcagagcttgagagtctgctagacgccactcct ttccttccgggtcatgaggtcaatggacttgcaggaggaaaagcggggaaacaccatttt ggtgaccacaccgtccttcttaccggcacagaccttaccgatctcaaccagaagaactgg aagtacctgaataatgagtgggcctgtctagaaacagctgaacccttcaagacctgggac tgtcctagcactagctctagcaccagcttcccagagctggagctgagtgtggagcatgtg cagaggagttacactgctccagacaaaacagggatccggatctactacagtccccccgct gtgaggaggatggaaaggagagccaaagaacacaatccagaggacgccaagtcagggctt acgtctcggggagctggtgtctgcgatccgactttgatgtcttcggcagtggcatcttca gcttcctcttcgccctcatcgtcttcatatgagcagtggctgagctcactctcccagcaa cacagagacctgctggagggcagggcaggtgtgtctgcgccattccatggcctggagatt tccggcaacctcagcgatgacatgaaggagatgaccaactgtgtacgacaggccatccgt tccagctctctggagcggaagtgcagcaaggacgctggaagccagacggtgggagtcacc agcacaggaacgcaaacagcccagtttgttagcgtggggctgcagacagacggccctacc tcttcaaccacgagaggagcgggacttcacgggaaggtgtggtctcctcgcccctcctct tctcttgcctcagcgaggtcacggcagatctcttcgtcactggagaaggtgcacagtcgc atcgaccggccgtgctgctctccgaaatacgggtcgcccaagctcacgcgaagggtctcc acatcatcctccaaactagagacctcctctacgtcatccagggaccgaagcgtttggaac ttgcccaaccgtagtgggtcacagaatggttcagcatgggctcgatccaccaccactcgt gacagcccagtactcagcggcctgaacgatggcctgtcgagcctctttagtgtggtggag cactcttcaagtatggaatccttgtggaagggtgacacatgcccaggaaagcaagcggca ggtaagccctcctgccctagtgttggcatcagcatcggtgacactggagcgcagaaatat ggaatcgtccaggagttcctacgcaatgtatgcgggaggacaggaccagcagggcctgga gagaggaatggaaccatagacgagccaaagcctgagtgtctgtcgggtgctctgatcggc actgatagcgtcacgaagattgtaaacaagagatttatgagacagacgcaacgggacgat atagtggtcagcagtggaaaggactccagcactgttaacaccagtaccagtagcctggag gactcatcctgtgactgcacctcacagtccctcactacctgctttgctcgctcctcccgc tccaccgttcgccatacccacagccagtgcaggcaccgcctacaggaatcagccccgaca tctgaggagaaactggatgccagtaatgaatga

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