Astyanax mexicanus (Mexican tetra): 103040062
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Entry
103040062 CDS
T05042
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X2
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103040062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103040062
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103040062
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103040062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
Motif
Other DBs
NCBI-GeneID:
103040062
NCBI-ProteinID:
XP_022521547
Ensembl:
ENSAMXG00000015935
LinkDB
All DBs
Position
1:12704570..12917153
Genome browser
AA seq
843 aa
AA seq
DB search
MRVSGRRLAGLWPWLLAAALQAALGHAGLELAAAVEAERSAPRAVIKVSVLKEPTAKPIV
LEGVFAGSSTGSAQGKLMQSHPLSLCNTSEDERQDSLFISIVKLESPESKVPQCQPLLDK
ARLALQRGAQAVIFDISDDASAANELRDSGSLLRPVVLVKATDAEELMLLVNKNEEAMVE
INIKVETQTWPPYDVGILLTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLET
RTYSSQGCSGGSQRSRGGRGSNSSSNSTPICAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELATRQPQRGRPQSPPEHSQAFLHPHPHLYPTSHPYSQHPLP
FSLRPHYPRGPSGPYPQLGHYSGSPPLHPSSLHCLTSRPLGASCSYHLAPDGHRGRHHRT
SGAHSCRNVGHHCSTHRRSCHHCPSSGNRTPGTRVTNPTNHHHHHHHGAHGVGGSQGRQD
DGSCSGASYRTERSGYFPDGPASDSSSGPCHGSSSDSVLNCTDVSLQGVFGSRSTFRSSL
SSEYDPFLYYGHENLDGPIAAARPRSLDSGVNQMGSGVGGGGFGPDEPQQQAVFSHVHYH
RHRHHYYDEAEPGQGPGRGSDEEQGSAGAAAGGSATASAGKDSPGSQDSGPYPCHCPKPD
TTEKLSPGGAEDRDSGSSSSGPSVLVSSSALPSPSSACCHQGPGRPQHRKTISCSLEATA
RPFPAVHFHQSMDLQDDCSIHIHYGQGSGGYCCPAPPDMGTALLPVPLIMDSGDWPCCSG
AHRVWQKRVHQAHSEPQLLGPSTPLDRPLCRAHHSPGQELPTDTCFYCQTVRNNQGSEEE
SGV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagggtctccgggcggcggctggccgggctgtggccgtggctgctggcggccgccctg
caggcggcgttgggccatgcgggcctggagctggcggcggccgtggaggcggagcgctcg
gcgccccgcgccgtcatcaaggtcagcgtgctgaaggagcccacggccaagcccatcgtc
ctggagggcgtgttcgccggaagcagcactggatccgcacaagggaaactcatgcagtct
cacccattgtctctgtgcaacaccagtgaggatgagcgccaggacagtctcttcatcagc
atcgttaagctggagagtccagagagcaaagtgccgcagtgccagcctctgctggacaag
gctcggctggcgctgcagagaggggctcaggctgtcatttttgatatcagtgatgatgcc
agcgctgctaatgagctgcgtgactcaggctccctcctgcggccggtggtgctggttaag
gcaacggatgccgaggagctgatgctactggtcaataagaacgaggaagccatggtcgag
atcaacatcaaggtggagacgcaaacatggcctccctatgatgtggggatcctgctcact
gtggtgttggttgttctggccatcatcatgatttttgcctttcgctctcgctgcaggtcc
aacagaacctgggactctgtccaccagcagaccatgcgggccatcagcaggctggagaca
cggacatacagctctcagggctgctcggggggctcgcagcgttcccgcgggggccggggc
tccaacagcagctccaactctacccccatctgtgccatctgcctcgaggagttcctggat
ggacaggacctgagaatcatctcatgtgcgcatgagttccataaggagtgtgtggacccc
tggctgctccagcaccgaacctgcccactctgcatgcacaacattatgggtacagagctg
gcaactcgtcaacctcagcgaggccgcccgcagtctcctccagagcacagtcaggcgttc
ctgcatccccaccctcacctctaccccacatcccatccttactcccagcaccctcttccc
ttttccctacgaccccattacccacgcggcccttctgggccttacccccaactaggccat
tatagtggctcacctccccttcacccaagcagtctacactgcctgaccagcaggcctctg
ggagctagctgcagttatcatctagccccagatggacaccgcggccggcatcacaggact
tcaggagcgcacagctgccgcaatgtaggacaccactgctccacccaccgccgctcctgt
catcactgcccttcctcaggcaaccgcacacccggtacgcgggttactaaccccactaac
caccaccaccatcatcaccatggagctcacggagttggaggttcgcagggcaggcaggac
gacggaagctgctcgggagcaagctaccgcacggagcgcagtggctacttccccgacggc
ccggccagtgactccagctcaggcccatgccacggctcatccagcgattcagtgctcaac
tgcactgatgttagcctgcagggagtctttggcagccgctccaccttccgcagctcgctc
agcagcgagtacgaccctttcctctactacggacatgaaaacctggacggcccaatagcg
gctgccaggcctcgttcacttgactctggggtcaatcagatggggagcggcgtaggaggt
ggagggttcggccctgacgagccgcagcagcaggctgtgttcagccatgtgcactaccac
agacacagacaccactattatgatgaggctgagccagggcaagggcctggccggggctct
gacgaggagcaggggagcgcaggggcggcagcaggtggctcagctactgcgtctgcaggt
aaagactcgccgggcagccaggactcgggtccttacccttgccactgcccaaaaccggac
actacagaaaagctgagccctggcggagcagaggatcgggactcgggatcctcctcctca
ggcccttctgtgctggtttccagctctgctctcccctctccttcttcagcctgctgccac
cagggaccgggacggccacaacaccggaagaccatcagctgtagcctggaggctaccgca
agacctttcccggccgtgcacttccatcagagcatggacctccaggacgactgtagcatc
cacatccactacgggcagggctcagggggctactgctgccccgcacccccggacatgggc
accgcgctgctgcccgtgccgctcatcatggactcgggtgactggccttgctgcagcggg
gcgcacagggtgtggcagaagcgagtgcatcaggcccattctgagccccagctgctgggc
cctagcactccgctggacagacccctgtgcagggcccatcacagccccgggcaagagctg
cccacggacacctgtttctactgccaaactgtacgcaataatcagggatcagaggaagag
tctggtgtttaa
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