Astyanax mexicanus (Mexican tetra): 103040065
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Entry
103040065 CDS
T05042
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103040065 (carmil2)
Membrane trafficking [BR:
amex04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
103040065 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
FATC
DUF3915
Motif
Other DBs
NCBI-GeneID:
103040065
NCBI-ProteinID:
XP_022535438
Ensembl:
ENSAMXG00000041743
LinkDB
All DBs
Position
9:25946696..26014148
Genome browser
AA seq
1699 aa
AA seq
DB search
MASQAGVPFCLKDTIIQLLKPQRVQFMTSVQLNQSRDRSETRILVMTQWRAHMFHSKQPV
KVESSFNYLEIHAIFIESLEQVNIETDRQVYSLTLRSVEDLEAMVSHVTASLKKIFPDSS
PGKLLKKVSPEFQDRLLSLASRVEEQLNGFYGPCGGFSDTYAALCDYNEFPCRDEVHWDV
HNIYHVQNCRDFNIVDFSHLESRDLALAVGALSFNQWFTKICSKDFKLTLDVQEQVIYLI
NRSTALQELCLEAGGLKADFAIKLAGALHEQRASALHVINLSANPIEDKGVISLSQSLSQ
LPHSLSRLYLSKISLSSKGLGSVAHMLLQTKSLSNSLTHLDLSLNAGCLATEEASSFLKF
LSSPNAVIHLNLSATDCPLDALFVSLCYGCYTSLSYLNLSRNVFSHRKVREVTRSVREFF
TKSMELKYVGLANTKLPPEALRLLLQGLATNSHLSELELDISSCELRSSGAQVIQEHIFE
TKAIGSLNLSDNGFENDMVTLVLSIGRSKSIRHLAIGRNFPRKSRALTDVLHRIVHMIQE
EDCPLESLSVCDSKLNTGTTILINSLGSSSALSKIDISGNCIGDTGAKMLAKVLTINTKL
RTLVWDRNNVTAVGFMDVANALERNNTLQHMSIPMSDMAQAYRSNPEKTEEAMQKIQECL
RRNSQRTCTSPDEMLSLQQSLKTSHSEQQVQHVCQKLQETMRPLSCYNIQEVQSDILSAE
EALQHARIAIKSLHRIYELGRSPSAGDTVHHILADVAKAISSELTEEIQEQAQAMLQFAQ
ASCPRVVQRMSVSEQLANRVASKTQQATRFIHSTVKEAENSIREKLSELKLSVSVSLVES
IIAEVLQDLSVAQQKLDKHLKEYSQPISSKTNVPQLRVVENEFPTDEYVPIIWRNSFHTR
SIRPAPSVKSLLEEEGEQQARASAHSQQEAEERERDRERAREREGGGGAGGGGTQGSRLT
AEERGRRLSSSSSLATSLSVTAAVGVPRTSGPTRPGRWAEPAGSGCGAASGSSITEPRRP
EPVSTQPPMDLPIEGQTLRHYTRTRPRPNRRNRQPPSKPQEQAAESENEANENMGRVDEG
VEEFFTKKIIPDDPLKHQREQPLNKAQPAEPTCVTTTPPTTTTTTTTTPTPSSAPSKNIK
KKFGDFFAFKKVRAGRGAKGEGAPEGKVKKTSIADLIRPLREAARAEKEREKEREREKER
EREKEKEKEKTEEDIIVKAPTIAPTPTVTDSALAAPAVDEKMAPRAPSPLLMPTPAPAAA
PAPASTPTPPASSPAKTEEVPALSPAAPTSPTKTPSPVAAVSPSEREKSRTLEKSRTPDG
ERRPKPTRRSLREGKSQSLILLTGLEPEQDTAAMQAKKHASESSSSFEQRLHVMLHRMGV
TKTPPSDSKKSQSKDEELRKANSEGAILDSKPEPPPTYMKPRTMSTSSDTRRPVRGSNME
PLRTDRPPLPERPLGPLPPNPALKPTLIPPGEPPAACRTITPAPRQPSPSPEPQPAAVEA
GPPTQAQPIEPPIPSPRKEPPPAPSPRRVFSTDSRERAERAQSVTEETLPKPRPRMKPSP
QRRAVSVHEDSLLQHAALLDPEELKAALPRLQRSPVRKRVNLGELEPCSEDLPESEEAKT
DGRGDHTEQAGETDSTAVSESPAEATGSTTRAGAETGPEEEDSKQERDEMTSDQDQQHTA
QGETSDQRTETPSPETNMD
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaggcaggggttcccttctgtctgaaagataccattattcagctgttgaaa
ccccaaagggtccagtttatgaccagtgtgcaactcaaccagtccagggaccggtcagaa
accagaatcctcgttatgactcagtggagagctcatatgttccacagcaagcagccagtg
aaggtggaaagttccttcaactatctggagattcatgccatcttcatcgagagtcttgag
caggtgaatattgaaacagacagacaggtttattctctcacattgaggtcagtggaagac
ctggaggccatggtcagtcatgtgacagcttccctcaagaaaatctttccagattcgtca
ccagggaagctgttgaagaaggtttctcctgagttccaggacaggctgttgtctcttgcc
tccagagtcgaggagcagctaaatggattttatggaccgtgtgggggtttctcagacacc
tatgcagcgctgtgtgattacaatgagttcccatgtcgtgatgaagtccactgggacgtg
cacaatatttaccatgttcagaactgtcgagatttcaacattgtggacttcagtcattta
gaaagcagagatttggcattggctgttggcgctctttccttcaaccagtggttcaccaaa
atctgcagcaaggacttcaaattgacactagacgtgcaggagcaggtgatctacctcatt
aaccgatccacggctctgcaggagttgtgcctggaggcaggcggactcaaagcggatttt
gctataaagctggccggagctcttcatgaacagcgtgcctctgctctccatgtcatcaat
ctgtctgccaaccctatagaggataaaggtgtaatatctctcagtcagagtttgtcgcaa
ctaccacatagtctcagtcggctttatctctccaagatctctctctcctcaaaaggattg
ggcagtgtagctcatatgctcctccagaccaaatctctctccaactcattgacccacctg
gacctgagtttaaatgcaggatgcttggctacagaggaagcttcgagcttcttaaaattc
ctgtcttctcccaacgctgtgattcacctgaaccttagtgcgactgactgtcctctagat
gctctctttgtctctctctgttatggatgctacactagtttatcctacctcaacctctcc
agaaacgtcttctcccataggaaggtgcgggaggtgacacgcagtgtgagagagttcttt
actaaaagcatggagctgaagtacgtggggctggccaacaccaaactacctcctgaggcc
ctcaggttattgctccagggtctggccactaacagtcacctctccgagctggagctggac
atcagcagttgtgagctgaggtccagtggagctcaggtaattcaagagcacatctttgag
accaaggccatagggagcttgaatctgtctgacaatggttttgagaatgacatggttact
cttgtgctgtccattgggcggagtaaatctatacgacacctggccatcggacgcaacttc
ccgaggaaatctagagctctgacagatgttctgcacagaatcgtgcacatgattcaggaa
gaagattgtcctttggagtctctatctgtgtgtgattccaagctaaatacgggcaccacc
atcctcataaacagcctgggtagcagctctgccctctccaagattgacatcagtgggaac
tgcatcggagacacaggcgccaagatgctagccaaggtcctcacaatcaacaccaagctc
agaactctggtctgggaccgaaataatgtgactgctgtgggttttatggatgtggccaat
gctctggagaggaacaacacactacaacacatgtccatcccgatgagtgatatggcacag
gcctaccgttccaacccagagaaaacggaggaggcaatgcagaagattcaggagtgctta
cggaggaatagtcagaggacatgcacttcacctgatgaaatgctgagtctgcagcagagt
ctgaaaaccagccactccgaacagcaagtacagcacgtctgtcagaagcttcaagagacc
atgaggcctctttcttgctacaacatccaggaagttcagagtgacatcctgtctgcagaa
gaggctcttcagcacgccagaatagccattaaatctttacacagaatttatgagttgggg
aggtcaccctctgctggtgatacagtgcatcacatcctggctgatgtagccaaagccata
agcagtgaactgactgaagaaatccaggaacaggcacaggcgatgctgcagtttgcccag
gcatcctgcccccgagttgtccagagaatgagtgtcagcgagcagctggccaaccgcgtt
gccagtaaaacccaacaagccacacggttcatccacagcacagtgaaggaggcagagaac
agcatcagggaaaagctcagtgaactgaaactgtcagtcagcgtctctctggtggagagt
atcattgcggaagttctgcaggacttgtcagtggctcagcagaaactggataagcattta
aaggagtactcccagcccatcagcagcaagaccaacgtgccccagctaagagtggtggag
aatgagttccctactgatgagtatgtacccatcatctggaggaatagcttccatacccgg
agtattcggccggctccttctgttaaaagtctgttggaagaggaaggcgagcagcaggct
cgggcgagtgcgcattcccagcaggaggcggaggaacgtgagagagacagggagcgagca
agggagagagagggaggaggaggagcaggaggaggagggactcagggctccaggctgaca
gctgaggagagggggcggcgcttgtcgtcctcctcttcgttggcgaccagcctgtccgtc
acggcagccgtaggcgtacccaggacctcaggccccacccggccagggaggtgggcggaa
cctgccggctctggctgtggagcggcgtcgggcagcagcatcacagagccccggcgtccg
gagcccgtgtctactcagccccctatggacctgcccatcgaaggccaaacgctgaggcac
tacacccgcacccggcccagacccaaccgccgcaacaggcagccacccagcaagcctcag
gagcaggcagctgagagtgagaatgaagccaatgagaatatggggagggtggacgagggc
gtagaggagttcttcaccaagaagatcatccctgatgaccccctaaagcaccagagggag
cagcccctcaataaagcacagcctgcagagcccacgtgtgtcacgaccacccctcccacc
accactaccaccactaccacgacccctaccccctcctcagccccctccaaaaacattaag
aagaagtttggcgacttttttgcctttaagaaggtccgtgctggtcgaggagccaagggc
gagggtgccccggagggaaaggtcaaaaagacttcaatagcagacctcatccgacccctc
cgggaggcggcacgggccgagaaagagcgcgagaaggaaagagagagggagaaggagaga
gaacgagagaaagaaaaagagaaggagaaaacagaggaggatatcatcgtcaaagcaccc
accattgctcccactcccaccgtcacagattcggccctcgctgcaccagccgtagacgag
aaaatggcacctagagctccttcacctctcctcatgcccacccctgccccggcagccgct
cctgctcccgcttccacccccacccctcctgcctcctcgcctgccaaaactgaagaggtc
ccagcattgtcccctgctgcacccacctcccccaccaaaactcccagtcccgtagcagca
gtgtcaccctcggagcgggagaagagtcggacgctggagaagagccgaacccccgacggg
gagaggaggcccaagcctacacgtcgttctctcagagagggcaagtcacagtccctcatc
ctgctcacagggctggagccagaacaggacactgcagccatgcaggccaagaagcacgcg
tccgaaagctcctccagttttgaacagcggcttcatgttatgcttcaccgcatgggcgtt
accaagacacctccgtccgactccaaaaagagccagagcaaagacgaggagctgaggaaa
gccaactcagaaggggcaatactggacagtaaaccagaacctccacccacctatatgaag
cctcgcacaatgtccacctcttcagacaccaggcgcccagtgagaggaagcaatatggaa
cccctccgcacagatcgcccaccgcttccagaacgacccctgggccctttgcctcccaat
ccagcccttaaacccaccctgatccctcctggtgagccccctgcagcctgccggaccatc
acacctgcacccaggcagcccagtccatctccggaaccccagccggcagcggtggaggcg
ggaccaccaacccaggctcagccaatagagcctccaataccctcaccccgcaaagaacca
ccacctgccccatcaccccgcagggtatttagcacagactcccgtgagagagcagagaga
gcacagtccgtcactgaagaaaccctccctaaaccacggccccgcatgaagccctcgcct
cagcgtcgcgcagtctctgttcatgaagactccctactccagcacgctgccctacttgac
cctgaggagctgaaagctgcattaccacggctgcagaggtcaccggtgcggaagcgggtg
aacctgggggagctggagccctgctcagaggatttacccgagagtgaagaagctaagact
gatggaaggggagatcacactgaacaggccggtgaaacagacagcaccgcggtcagcgag
agcccagcagaagccactgggagcacgaccagggcaggggctgaaactggacctgaagaa
gaggacagcaagcaggagcgggacgagatgacatcagatcaagatcagcagcacacagcg
cagggagaaacatcagaccaaagaactgaaaccccctcacctgagacaaacatggactga
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integrated database retrieval system
