Astyanax mexicanus (Mexican tetra): 103040082
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Entry
103040082 CDS
T05042
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103040082 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103040082 (asap1b)
Membrane trafficking [BR:
amex04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
103040082 (asap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
SH3_9
BAR
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
OEP
DUF4404
Motif
Other DBs
NCBI-GeneID:
103040082
NCBI-ProteinID:
XP_022522739
Ensembl:
ENSAMXG00000002685
LinkDB
All DBs
Position
1:complement(103993754..104093896)
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AA seq
1136 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVSVLEEALDQDRTSLQKVKKSVKA
IYNSGQDHVQNEETYALALDKFGSNFISRDNPDLGTAFVKFSTLTKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDLKKPFDKAWKDYETKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLEKEDSQSKQGGYSMHQLQGNK
EFGSEKKGYLMKKSDGLRKVWQRRKCSVKGGILTISHATSNRQPVKLNLLTCQVKPSAED
RKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNMAFRGEQTAGEDGLEDLTKAI
IDDVLRIPGNEVCCDCGAADPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKLGT
SELLLAKNVGNSNFNEIMEGNLPCPSPKPTPSSDMTVRKEFIHAKYVDHKFARKMCMSAA
VKMSELYEAVRSRDLLALIQVYAEGVELMEPLPDAGQEAGETALHFAVRTADHTSLHQVD
FLVQNSGNLDKQTERGNTALHYCCIYEKHECLKLLLRGKPATDITNHNGETALDVARRMR
IDQCAEALMQATEGKFNPKVHVEYEWNLRQEEMDESDDDLDDKPSPIKKDRRPQSFCHSS
SLSPHDKLSLPIFSGPRDKQRLSYSSFTTQMYSVSTDCPSSPVTDAPPLPPRNAGKAPPL
AFLGSHSHYATLASTRLYITPPSSSSPLSPGSQIPSNSNSTLSKKRPPPPPPGHKRTLSD
PPTPLSYTPHCKGSDSTPPPINKMSPVANRFEGILQQQSTTSSTTKSTLGPRVLPKLPQK
VALRKIETIHHPSVDRPSQPHEPVLLFQKSLQCSDTPQKVPVPDKPHSGDLPPKPQPSEL
PPKPGELPPKPHLSDLPPKPQLGDLPPKPQLKDLPPKPQLADLPILKPVAPEPVHKPPPG
EVTPKSESPETPTSIQPAEPSPQPTPPSEDTNGSPACAPDTPVPLPRKINTGKSKTRRVK
TIYDCQADNDDELTFVEGEVIVVTGEEDQEWWIGHIEGQPERKGAFPMSFVHILSD
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcaaatatcggtgtccgagtttctctcggagacgacggaggattacaactct
cccaccacgtccagcttcactacccgcctccagagctgcaggaacaccgtcagcgtgctg
gaggaggctttggatcaggacagaacttcacttcaaaaagtcaagaagtcagtcaaagcc
atctacaactctggccaagatcatgtccagaacgaggagacgtacgccctggcgctggat
aaatttggaagtaacttcatcagccgggataaccctgacctgggaacagccttcgtcaag
ttttccaccctgaccaaggagctgtctgcactgcttaagaacctgctccagagtctgagt
cataatgtgatcttcacgctggactctctgctgaaaggagacctgaaaggcgtgaagggg
gatttgaaaaaaccctttgacaaggcttggaaggactatgaaacgaagtttacaaagata
gagaaggaaaaacgagagcacgccaagcagcacggcatgatccgcacggagatcacgggc
gctgagatcgctgaggagatggagaaggagcgacgcctctttcagctccagatgtgcgag
tacctgatcaaagtgaatgagattaagaccaaaaagggggtggaccttctgcagaacctg
atcaagtattaccacgcacagtgcaatttcttccaagatggcttgaagactgctgataaa
ctcaagcagtacattgagaagctagctgctgatctttacaatataaagcaaactcaggat
gaggagaagaagcagctcacagccctgagggatcttatcaagtcttccctgcaactggaa
aaggaggactctcagagcaagcagggtggctatagcatgcaccagctccagggtaacaaa
gagtttggcagtgagaagaaaggatatctgatgaagaagagtgatgggctgagaaaggtg
tggcaaaggaggaagtgttcagtaaaaggaggaattctcaccatctctcatgccacttca
aacagacagccagtcaaactcaacctgctcacctgccaggtcaagccgagcgctgaagac
cggaagtgttttgacctcatctctcataatcgcacatatcacttccaggctgaagatgag
caggagtttgtaatctggatctcagtgttgactaacagtaaggaggaggcgttgaacatg
gcattcagaggagagcagacagcaggagaggacggcctggaggatctgactaaagccatc
atcgacgacgtcctgcgcattcctggcaatgaagtttgctgtgactgtggggctgcagat
cctaaatggctgtcaactaatcttgggatcctgacgtgtatcgagtgctcgggcattcac
agggagatgggagttcacatctctcgcattcaatccatggaactggacaaactggggaca
tctgaactcttgctggccaagaatgtcgggaacagtaattttaatgagataatggaaggg
aatcttccttgtccctctccaaagcccactccatccagtgatatgacagttcgtaaagag
tttatacatgccaaatacgtggatcataagtttgcgaggaagatgtgcatgtctgcagcg
gtgaagatgagcgagctctatgaggcagtcaggtcacgtgacctgctggccctcatccag
gtgtatgccgagggggtggagcttatggagcctcttcctgatgctggtcaggaggctggg
gagactgcactgcactttgctgtgaggactgctgaccacacctcactacatcaggtcgac
ttcctggttcagaacagtggaaacctggataaacagacagagagaggcaacacagccctg
cattactgctgcatctacgaaaaacatgaatgcctcaaactgctcctgagaggcaaacct
gctactgacatcaccaatcataatggagagacggcattagatgtggccaggcgaatgagg
atcgaccagtgcgctgaggcattgatgcaagctacagaaggcaagtttaaccctaaagtt
catgtggagtacgagtggaaccttagacaggaggagatggacgagagcgatgatgatctt
gatgacaagccgagtcccataaagaaggaccgcaggccgcagagtttctgtcactcctcc
agcctgtctcctcacgataagctctctctacccatattctccggtcctcgcgataagcag
cgtctctcctacagctccttcaccactcagatgtacagcgtctccaccgactgtccgtcc
tcccctgtgactgacgccccgcctcttccacccaggaacgcaggcaaagctcctcctctg
gcattccttggttctcattcgcactatgctactctggctagcactcgactatacatcacc
ccgccctcgtcatcctcccctctctcccctggctcccagatccccagtaacagcaactcc
accctgtccaagaagagacccccgccccctccccccggacacaaacgcacgctgtctgac
ccccctaccccgctctcatacacccctcactgtaaaggaagcgactccactccacctccc
atcaacaagatgtctccagtagcaaaccgctttgaagggatattacagcaacaaagcact
acatccagtaccactaaatctacacttggcccaagggttcttcccaaactacctcagaag
gttgctctgcgcaagattgagaccattcaccacccgtccgtggacagacccagccagcct
cacgagcctgtactgctgttccagaaatctctgcagtgttctgacactccacagaaagtt
cctgtacctgataaacctcattcaggagacctaccccctaaaccccagccctcagaatta
ccccccaaaccaggagaactgccccctaaaccacatctctctgacctgcctcctaaaccc
cagcttggagatctgccccccaaaccccaactgaaagaccttcccccgaaaccccaactg
gctgacctccccatcctcaaacctgtagcccctgagcctgttcataagccccctccagga
gaagtgacccccaaatctgaatcaccagagactccaacgtccattcagccagcagaaccc
tcacctcagcccacacctcccagtgaagacaccaacggaagtccagcatgcgccccggat
accccagtaccactgcccaggaagatcaatacagggaaaagtaaaacacgacgagtgaag
accatatatgactgtcaggcagacaatgatgacgagctgacgtttgtagagggtgaagtc
attgtggtaaccggagaggaggaccaggagtggtggattggacacatcgaagggcagccg
gagaggaaaggtgccttccccatgtccttcgtccacatcctgtctgactga
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