Astyanax mexicanus (Mexican tetra): 103040108
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Entry
103040108 CDS
T05042
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103040108 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Collectrin
Motif
Other DBs
NCBI-GeneID:
103040108
NCBI-ProteinID:
XP_007245065
Ensembl:
ENSAMXG00000016131
UniProt:
A0A8B9JTA9
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Position
2:complement(35815629..35836396)
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AA seq
791 aa
AA seq
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MIWRVTALTLLYSAVLSEALTFYRPLFHQQSRNTRRRRDSWAVTSNFVECKSPVSPKEHK
VLDTNTYETGFHGDDGFTFSLTWVGDGTGVILVLSTVSSSLESFYEGGYSRLYRSEDYGK
AFHDISHAVNHTFIKKDFGICAGPGNSQQVILIAELPTTHNPGGVIFTSVDAGVTFKSVQ
LPFHPAQPISFHDKNKECLLVIGTDGGLWLSQDFGKKWSKIHDGVYSFTWGPGNTLFFSY
SPKNTVDADKQGKLLLRRTQDLGRTFTTISQNIFTFGYIGGFLFTSVLEKQGSPRVIYVS
SDQGENFNKALLPTATSEQFYSLLDGDEDMIFIHVDSPGENSHFGTIYTSDDRGILYSKS
LERHLFGMERKSDFTNVTSLRGVYLTNVLKKDGRITTVITFNKGGEWIPLRKPQNVDCGR
NVKKCNLHIHGEHCHYSGISPMVPLTDPSAVGLIIAHGSVGDSISASKPDVYVSSDGGYN
WIGTLRGPHFYSILDSGGLLVAVEAHKDRPVHVIKFSTDEGQCWKTYNFTTHPFFIAGLA
SEPGSKTMNISVFGYRPDDDDQPMWVAVTIDFEKLLTRECGDEDYTEWLAHSDSSETAGC
VLGYKETFRRLKMMSVCRNGRDYVVSKQQMPCPCTREDYMCDYGYYHNENSSECVLQEGF
IDKTPKNCVESDKHQITGYRKIPSDKCEGGFSPPHQKIHCGNSSNTSNSTQPYEGTKEVW
LQIVMGVSVGIVLLAIVVAVAVTAHRRKYSQRSTAYRFSALQLREDGPNMESAPNSNRAS
YQEDSDDDLIE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatctggagagttacagcactgactctgctctattcagcggtcctcagtgaagcgctc
accttctacagacctctgtttcaccaacagtccagaaacaccaggagaagacgagacagc
tgggcggtcacttccaacttcgtggagtgtaagagtccggtcagccctaaagagcacaag
gtcctggacacgaacacctacgagacagggtttcatggagatgatggctttacttttagt
ctcacctgggtaggggatgggactggggttattctagtgctgtccacagtcagttcttca
ctggagtcattttatgaaggaggctactctcgattatacaggagtgaagactatggaaaa
gccttccatgatatttcccatgcagttaaccataccttcataaagaaggactttggcatc
tgtgcaggacctggaaactctcagcaggtaattttaatagccgaactgccaactactcac
aacccaggaggtgtcatatttacatcagtggatgcgggagtgacttttaaatcagtccag
ctgcccttccatccagcgcagccaatatcatttcatgacaagaacaaggaatgtctgctg
gtcattggcacagatggtggtttgtggctctctcaggactttggcaaaaaatggtctaaa
attcatgatggagtgtactcttttacatggggaccaggcaacaccctgtttttcagctac
agccctaaaaacacagtggacgcagataaacaaggaaaacttttgctgagacgtacacaa
gacctgggcagaacttttactaccatttctcagaacatcttcacattcggctacattgga
ggcttcttatttacctctgtcttggagaagcagggttctccacgggttatctacgtgtct
tcagaccagggagaaaatttcaacaaagctctgctgccaaccgccacctcagagcagttc
tactctcttttggacggtgatgaggacatgatctttatacatgtggacagccctggagaa
aactcgcatttcgggacgatctatacctcagatgaccgtggcatcctgtactccaagtca
ctggagcgacacctttttggtatggaaaggaagagtgactttaccaatgtgacatcactg
agaggagtctaccttaccaatgtcctgaagaaagatggaagaattaccacggtcatcaca
tttaataaaggtggagagtggataccactaagaaagccacagaatgttgactgtggaaga
aatgttaaaaagtgtaacctacacatccatggagagcactgtcactacagcggtatttcc
cccatggtgcctctgaccgatccttctgctgttggcctcatcattgctcatggtagtgtt
ggggattcaatctcagcatctaagccagatgtgtatgtatcctcggatgggggttacaac
tggatcggcacactgagggggcctcacttctacagcatactggattcagggggcctgtta
gtggctgtggaggctcacaaagaccggccagttcatgtcataaagttctccacagatgag
ggtcagtgttggaagacttataattttactacgcatcctttctttattgccggcctagca
tccgagcctggaagtaagaccatgaacataagtgtgtttggataccgacctgatgacgac
gatcagcccatgtgggttgcagttaccatagactttgagaagctgctgaccagagagtgt
ggagatgaggactatacggagtggctggcccattccgactcatcagagactgctgggtgt
gtcttaggctacaaggagacgtttaggagattaaaaatgatgtccgtctgcaggaatggt
cgagactatgtggtcagcaagcaacagatgccatgtccctgtaccagagaagattacatg
tgtgattatggatactatcacaatgaaaacagctctgaatgtgtgctacaggagggcttc
atagacaagacaccgaagaactgcgtagaatcggacaagcatcagataacggggtatcga
aagatccccagtgataagtgtgaaggaggtttcagccccccacatcaaaagattcattgt
gggaactccagtaatacttccaactcaacccaaccttacgaaggaacaaaggaagtgtgg
ttgcagattgtaatgggcgtcagtgttgggatcgtactgctggccatcgttgttgcagtt
gctgttacagcccacagaaggaaatacagtcaaaggtcgacagcataccgcttctctgca
ctccagctgcgtgaagacgggcccaacatggaaagtgcaccaaacagtaaccgagccagc
taccaagaagattcagatgatgatcttattgaatga
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