Astyanax mexicanus (Mexican tetra): 103040188
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Entry
103040188 CDS
T05042
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
103040188
NCBI-ProteinID:
XP_049341971
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Position
12:36970658..37085405
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AA seq
987 aa
AA seq
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MRSEALLLYFTLLQIAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNSTQRHKLDIQL
IVITNRTLYVAARDHVYTVDIDTANSEEIFFSKKMTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNNDTLFVCGTNAFNPSCRTYKTDTLDTLGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFYREIA
MEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMADIATAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGTPSVEKYKVSNEFPDDTLNFIKMHPLMEEAVPSIANRPWFLKTMVRYRL
TRIAVDNAAGPYRNHTVVFLGSERGIILKFLAKMNSGFLNDSLFLEELSIYNPEKCSIDG
VDDKRIINMQIDSKSHALFVAFTSCVVKVPLSRCERHGRCKKSCIASRDPYCGWLSEGAC
REVVTSTKWSFEQDVEQGNTDGLGDCQNSFVALNGRSTSTFLSTVQPAASGPLGQDRMVE
SKDPPLPTDKRDPYIAVPSLTQQESTGVIRESFQKGRDQMVPITLLAVAVILAFVMGAVF
SGIIVYCVCDHHRRRDFEIPGRKDKDSVNSRRGSMNSVTKLTGLFETQAKDGRPEAILAP
LMHNGRLTNGKMLIKAEQHHLDLAALPTPESTPMQPRRKPSRGSREWERNQNLINACAKD
LASMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQQAYQHEYVEQPHLPDDQAATLEYKTM
KSPCHSLSMSDSDGIPPRVPQREASLAAVVPPAVPQMGKRLDMYSRGYPASSSKQKKQHN
TNSSNSSHLSRNHSFARAETPPPAPQRVDSMHLGSPPPMGLTRHSSLSSYGSLPRCSSSS
RHLKPDVPPKPSQVSLSSKVKSSDLCT
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggaggccttgttgctgtatttcaccctgctgcagatagctggggccggcttc
ccagaggattcagagccaatcagtatttcacatggcaactatacaaaacaatacccagtg
ttcgtcggccacaaaccaggaaggaacagcacacagcggcacaagttggacatccagctg
atcgtcataaccaaccggactctatacgttgctgcgagggatcacgtatatacagtggac
atcgacacagccaacagcgaagagatctttttcagcaagaaaatgacgtggaagtccagg
caagcggatgtggacacttgtagaatgaaagggaagcataaggatgagtgccacaatttc
atcaaggtccttctccagcaaaacaatgacaccctgtttgtgtgcggaacgaacgctttc
aacccttcctgtcgaacgtacaagacagacaccctggacacccttggagaggagattagc
ggaatggcccgatgcccatatgatgccaagcatgccaatgttgccttgtttgctgatgga
aagctgtactctgccacggtcaccgactttctggctatcgacgctgtcatttatcgcagt
ctaggagacagtccgactctacgaacagtaaagcacgattcaaagtggctaaaagagccc
tattttgtccaggcggtggattacggagacttcatttactttttctatcgggaaatcgcc
atggagtacaacagcatgggaaaggtggttttcccccgagtggctcgggtgtgtaagaac
gatcgcggcggttcacagcgtgtcctggagaaacagtggacgtctttcttaaaggcccgt
ctgaactgctccatccccggagactcgcacttctacttcaacatcctgcaggctgtcact
gacgtcatccatattaatgggcgtgatgttgtcatggcaaccttctccacgccgtacaac
agcattccaggctcagccgtctgtgcctatgacatggccgacatcgctacagccttcacg
ggccgtttcaaagagcagaagtcccctgattccacctggaccccggtgcccgaggagaaa
gttcccaagcccaggccaggctgctgtgctgggacaccatcagtggaaaagtacaaagtg
tccaacgaattcccagacgacacgttgaacttcatcaagatgcatcctctgatggaagag
gcagtgccctctatcgccaaccgcccttggtttctcaagactatggttcgataccggctc
acgcgcatagcagtggataatgccgccgggccctatcgcaaccacaccgtcgttttcctg
ggctcagaaagaggcatcatcctcaagttcctggctaaaatgaacagcggcttcctgaac
gacagcctcttcctggaggagctgagcatctacaaccccgagaagtgcagcattgacggc
gtagacgataaacgcataatcaacatgcagatcgacagcaaaagtcacgctctgtttgta
gccttcacgtcctgtgtagtcaaggttccactatcgcggtgtgagagacatgggagatgc
aaaaagtcctgcatcgcctccagagacccctactgtggctggctgtcggagggagcctgc
agagaagtcgtcaccagcacaaaatggtcattcgagcaggacgtggagcagggcaacaca
gatggactgggagactgccaaaactcctttgtggctctaaatggccgttccacctccacc
tttctcagcactgtccagcccgccgccagcgggccgctgggacaggaccgcatggtcgag
tccaaggacccgcccctgcccaccgataagagggacccttatatcgcggtgccctctcta
acccagcaggagtccactggagtgattcgtgagagcttccagaaaggacgggatcagatg
gtccccatcactctgcttgccgtcgctgtgatcctggcctttgtcatgggtgccgtcttc
tcaggaatcatagtctactgcgtgtgtgaccaccaccgccgacgcgacttcgagatcccc
ggacgcaaggataaggactctgtcaactccagacgaggctccatgaacagtgtcaccaag
ctgacaggcctattcgagactcaagcaaaagatggccgccctgaggccatcctagcaccc
ttgatgcacaatggacgcctgaccaatggcaagatgctcatcaaggccgaacagcaccac
ctggacctggccgctctgccgactccagagtccaccccgatgcagccacgccgcaaacca
agccggggcagccgcgaatgggagcgaaaccagaacttgatcaacgcctgtgccaaagac
ctagcctcaatgggctcaccagtcatcccaactgacctgccactgagggcgtcgccaggc
cacatccctagtgtggtggtgctgcctttacctcagcaccagcaggcctatcagcacgag
tacgtcgagcagccacatttgcctgatgaccaagccgccactctggagtacaaaaccatg
aagagtccctgccacagtcttagcatgtcggacagtgatgggataccgcctcgagtccca
cagcgggaggcctctttggccgctgtggtgccaccagccgtcccacaaatgggcaagagg
ctggacatgtacagtcgtgggtatcctgcaagctccagcaagcagaagaagcagcacaac
accaattcctccaactcatcccatttgtcgagaaaccacagcttcgccagggctgaaact
ccgccaccggccccacaaagggtggactccatgcatctcggctcccctccacccatgggc
cttacgcggcactccagcctgagctcctacggctcactgccccgctgcagcagctccagc
aggcacctcaagcccgatgttccacctaaaccctcgcaagtctccctctcctcaaaagtc
aagtccagtgacttatgcacataa
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