KEGG   Astyanax mexicanus (Mexican tetra): 103040188
Entry
103040188         CDS       T05042                                 
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
  KO
K06842  semaphorin 6
Organism
amex  Astyanax mexicanus (Mexican tetra)
SSDB
Motif
Pfam: Sema PSI DUF3481
Other DBs
NCBI-GeneID: 103040188
NCBI-ProteinID: XP_049341971
LinkDB
Position
12:36970658..37085405
AA seq 987 aa
MRSEALLLYFTLLQIAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNSTQRHKLDIQL
IVITNRTLYVAARDHVYTVDIDTANSEEIFFSKKMTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNNDTLFVCGTNAFNPSCRTYKTDTLDTLGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFYREIA
MEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMADIATAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGTPSVEKYKVSNEFPDDTLNFIKMHPLMEEAVPSIANRPWFLKTMVRYRL
TRIAVDNAAGPYRNHTVVFLGSERGIILKFLAKMNSGFLNDSLFLEELSIYNPEKCSIDG
VDDKRIINMQIDSKSHALFVAFTSCVVKVPLSRCERHGRCKKSCIASRDPYCGWLSEGAC
REVVTSTKWSFEQDVEQGNTDGLGDCQNSFVALNGRSTSTFLSTVQPAASGPLGQDRMVE
SKDPPLPTDKRDPYIAVPSLTQQESTGVIRESFQKGRDQMVPITLLAVAVILAFVMGAVF
SGIIVYCVCDHHRRRDFEIPGRKDKDSVNSRRGSMNSVTKLTGLFETQAKDGRPEAILAP
LMHNGRLTNGKMLIKAEQHHLDLAALPTPESTPMQPRRKPSRGSREWERNQNLINACAKD
LASMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQQAYQHEYVEQPHLPDDQAATLEYKTM
KSPCHSLSMSDSDGIPPRVPQREASLAAVVPPAVPQMGKRLDMYSRGYPASSSKQKKQHN
TNSSNSSHLSRNHSFARAETPPPAPQRVDSMHLGSPPPMGLTRHSSLSSYGSLPRCSSSS
RHLKPDVPPKPSQVSLSSKVKSSDLCT
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgaggtcggaggccttgttgctgtatttcaccctgctgcagatagctggggccggcttc
ccagaggattcagagccaatcagtatttcacatggcaactatacaaaacaatacccagtg
ttcgtcggccacaaaccaggaaggaacagcacacagcggcacaagttggacatccagctg
atcgtcataaccaaccggactctatacgttgctgcgagggatcacgtatatacagtggac
atcgacacagccaacagcgaagagatctttttcagcaagaaaatgacgtggaagtccagg
caagcggatgtggacacttgtagaatgaaagggaagcataaggatgagtgccacaatttc
atcaaggtccttctccagcaaaacaatgacaccctgtttgtgtgcggaacgaacgctttc
aacccttcctgtcgaacgtacaagacagacaccctggacacccttggagaggagattagc
ggaatggcccgatgcccatatgatgccaagcatgccaatgttgccttgtttgctgatgga
aagctgtactctgccacggtcaccgactttctggctatcgacgctgtcatttatcgcagt
ctaggagacagtccgactctacgaacagtaaagcacgattcaaagtggctaaaagagccc
tattttgtccaggcggtggattacggagacttcatttactttttctatcgggaaatcgcc
atggagtacaacagcatgggaaaggtggttttcccccgagtggctcgggtgtgtaagaac
gatcgcggcggttcacagcgtgtcctggagaaacagtggacgtctttcttaaaggcccgt
ctgaactgctccatccccggagactcgcacttctacttcaacatcctgcaggctgtcact
gacgtcatccatattaatgggcgtgatgttgtcatggcaaccttctccacgccgtacaac
agcattccaggctcagccgtctgtgcctatgacatggccgacatcgctacagccttcacg
ggccgtttcaaagagcagaagtcccctgattccacctggaccccggtgcccgaggagaaa
gttcccaagcccaggccaggctgctgtgctgggacaccatcagtggaaaagtacaaagtg
tccaacgaattcccagacgacacgttgaacttcatcaagatgcatcctctgatggaagag
gcagtgccctctatcgccaaccgcccttggtttctcaagactatggttcgataccggctc
acgcgcatagcagtggataatgccgccgggccctatcgcaaccacaccgtcgttttcctg
ggctcagaaagaggcatcatcctcaagttcctggctaaaatgaacagcggcttcctgaac
gacagcctcttcctggaggagctgagcatctacaaccccgagaagtgcagcattgacggc
gtagacgataaacgcataatcaacatgcagatcgacagcaaaagtcacgctctgtttgta
gccttcacgtcctgtgtagtcaaggttccactatcgcggtgtgagagacatgggagatgc
aaaaagtcctgcatcgcctccagagacccctactgtggctggctgtcggagggagcctgc
agagaagtcgtcaccagcacaaaatggtcattcgagcaggacgtggagcagggcaacaca
gatggactgggagactgccaaaactcctttgtggctctaaatggccgttccacctccacc
tttctcagcactgtccagcccgccgccagcgggccgctgggacaggaccgcatggtcgag
tccaaggacccgcccctgcccaccgataagagggacccttatatcgcggtgccctctcta
acccagcaggagtccactggagtgattcgtgagagcttccagaaaggacgggatcagatg
gtccccatcactctgcttgccgtcgctgtgatcctggcctttgtcatgggtgccgtcttc
tcaggaatcatagtctactgcgtgtgtgaccaccaccgccgacgcgacttcgagatcccc
ggacgcaaggataaggactctgtcaactccagacgaggctccatgaacagtgtcaccaag
ctgacaggcctattcgagactcaagcaaaagatggccgccctgaggccatcctagcaccc
ttgatgcacaatggacgcctgaccaatggcaagatgctcatcaaggccgaacagcaccac
ctggacctggccgctctgccgactccagagtccaccccgatgcagccacgccgcaaacca
agccggggcagccgcgaatgggagcgaaaccagaacttgatcaacgcctgtgccaaagac
ctagcctcaatgggctcaccagtcatcccaactgacctgccactgagggcgtcgccaggc
cacatccctagtgtggtggtgctgcctttacctcagcaccagcaggcctatcagcacgag
tacgtcgagcagccacatttgcctgatgaccaagccgccactctggagtacaaaaccatg
aagagtccctgccacagtcttagcatgtcggacagtgatgggataccgcctcgagtccca
cagcgggaggcctctttggccgctgtggtgccaccagccgtcccacaaatgggcaagagg
ctggacatgtacagtcgtgggtatcctgcaagctccagcaagcagaagaagcagcacaac
accaattcctccaactcatcccatttgtcgagaaaccacagcttcgccagggctgaaact
ccgccaccggccccacaaagggtggactccatgcatctcggctcccctccacccatgggc
cttacgcggcactccagcctgagctcctacggctcactgccccgctgcagcagctccagc
aggcacctcaagcccgatgttccacctaaaccctcgcaagtctccctctcctcaaaagtc
aagtccagtgacttatgcacataa

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