Astyanax mexicanus (Mexican tetra): 103040260
Help
Entry
103040260 CDS
T05042
Symbol
sort1a
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103040260 (sort1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
103040260
NCBI-ProteinID:
XP_022538114
Ensembl:
ENSAMXG00000029078
LinkDB
All DBs
Position
24:28529085..28565993
Genome browser
AA seq
817 aa
AA seq
DB search
MRAVCRCVTVLLFSAVLCVDFEGGVRLGRGSRATFVKSRTRSSTPGVRPGSDPLPVGPGR
VKRSEGSAADSCGSLRGYGSRLKDNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPL
FMIRFGQSKLYRSEDYGKSFQDVTDLINNTFIQSEFGIAIGPENSGKVILTGDVSDGKAS
RIFRSMDFGKSFYPSDLPFQPIMQIAYNPENSSILTAISITYDLWLSTDFGQSWKKIHDT
VCLVKWGTADTLFFTTNPNGSCSDKGMLELRKTSDNGQSFKTIGSRIYSFGLGGRFIFAS
VMSATSLTRMIHVSVDKGEVWNMAQLPTVGHEQFYSILAANNDMVFMHVDEPGDSGMGTI
YVSDDRGTVFSKSLERHLYTSTGGDTDFTIVSSLRGVYMTSVLAQDGSVQTVVTFDQGGK
WRPLRKPWNGKCDATAGDPGLCSLHIHASYSTSMMLNVPMLPLTEPNAVGLILAHGSVGD
AVSVLSPDVFVSDDGGYTWSQALKGPHHYAILDSGGLLVAVEHNPNQPIFQIKFSTDEGQ
CWHVYNFTDEPIYFTGLASEPGARSMNLSLWGYRESMMSQYWVSVTIDFKQLFSRDCGEG
DYVQWLAHSDNTSDQTDGCLLGFKEKYLRLRKDSVCWNGRDYVISKQPTQCPCTLDDFQC
DFGYYRAENSSECVEQPDLKGHTLEFCLHGRKEQLQTSGYRKIPGDRCEGGKVPERRVID
LSKKCVSNLLRPELLSEAHSGSSAAVIAVVIIVLMISAVAGVLLVKKYVCGGRFLVHRYS
EMQRHVEANGIEGVDDLDTTEAGKTHYNDDSDEDLLA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgtgtgccgctgtgtgacggtgttgttgttctccgcggttctgtgtgtggat
tttgagggcggagtgcggctcggtcgggggtcccgggctactttcgtgaagagccggaca
cggagctccactcccggcgttagaccggggtctgacccgctgcccgtcggccccgggagg
gtgaagaggagcgagggttccgccgcggactcgtgcggctccctgcggggctatgggtcc
agactaaaggacaacacgcacacttacgcctttaatgatctgagcggctctgtgtccctc
gcctgggtcggagatggaacaggggtgcttttggtcctcaccacatttcaggtgcctctg
ttcatgatccgctttggccagtccaaactgtacaggagcgaagactatggaaagtccttt
caggatgtcaccgatctcatcaacaacaccttcatccagtcagagtttggcattgccatt
ggcccagagaactcaggaaaggtgatcctcacaggtgatgtgtctgatggtaaggcctcc
cggatcttccgctcgatggactttgggaagagtttttatccctcggatttaccgttccag
cccataatgcagattgcctacaacccagaaaacagcagcattcttactgccatcagcatc
acgtatgacctgtggctctctacagattttggacaaagctggaaaaagattcatgacaca
gtgtgtctggtgaaatggggtactgctgatactctcttctttaccacaaatcccaatgga
tcctgcagtgacaagggaatgctggaactgaggaagacgtcagacaatggtcaaagcttt
aagactattgggagcaggatctactcctttgggctgggaggtcgctttattttcgcttca
gtcatgtctgccacgagtttgacgcgcatgatccacgtgtctgtggataagggtgaggtg
tggaacatggcccagctgcccacagtgggacacgagcagttttactccatactggctgcc
aacaacgacatggtgttcatgcacgtggacgaacctggagactctgggatgggcaccatc
tacgtgtcggatgaccgaggcaccgtgttctccaagtcccttgagcgccatctctacaca
tccacagggggcgacactgacttcaccattgtctcctctctcaggggggtctacatgacc
agtgtgctggctcaggatggttccgttcagaccgtggtgacattcgatcaagggggtaaa
tggagacccctccggaaaccctggaatgggaaatgtgacgccaccgcaggggaccctggc
ttgtgcagtctacacatccacgcctcctacagcacatccatgatgctcaatgtgccgatg
ctgcctctgaccgagcccaatgctgtcggactcatcctcgctcatggcagtgtaggtgac
gccgtgtccgttttgtctcctgatgtcttcgtttctgatgacggcggatacacatggtca
caggcactcaagggaccccaccactatgccatcctagactcaggaggactgctggtggct
gtggaacacaaccctaatcagcccatcttccagattaaattttccacagacgagggccag
tgttggcatgtgtacaacttcacagatgagccgatatacttcacggggttggcgtctgag
cctggagctcggtccatgaacctcagtctgtggggttatagggagtccatgatgagtcag
tactgggtgtctgtcactatagacttcaagcagcttttctccagagattgtggggagggg
gattacgtgcagtggctggcccactccgacaacacaagtgatcagactgatggctgcttg
ctgggatttaaggaaaagtatctaaggttacggaaagactccgtatgctggaacggaaga
gactacgtcatctccaagcagccgacacaatgcccgtgcacactggatgatttccagtgt
gactttggatactaccgggcagagaacagctcagagtgtgtggagcagccggatctgaag
ggccacacgcttgagttctgtctacacggccgtaaagagcagctgcagactagtggttac
aggaagatccccggggaccgatgtgaggggggcaaagtacccgagaggcgagtgattgac
ctgagcaagaagtgtgtcagtaacctgctgaggccagagctactgtcggaggctcactct
ggcagctcggctgcagtaatcgctgtagtgatcatagttctgatgatcagtgctgtggct
ggggttcttctggtcaagaagtacgtctgtggaggaaggttcctggttcatcgctactca
gagatgcagaggcatgtggaagctaatggcattgagggagtggacgacctggacactaca
gaggcagggaagactcattacaatgacgactctgatgaggacctgctggcctga
DBGET
integrated database retrieval system