KEGG   Astyanax mexicanus (Mexican tetra): 103040260
Entry
103040260         CDS       T05042                                 
Symbol
sort1a
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04142  Lysosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    103040260 (sort1a)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 103040260
NCBI-ProteinID: XP_022538114
Ensembl: ENSAMXG00000029078
LinkDB
Position
24:28529085..28565993
AA seq 817 aa
MRAVCRCVTVLLFSAVLCVDFEGGVRLGRGSRATFVKSRTRSSTPGVRPGSDPLPVGPGR
VKRSEGSAADSCGSLRGYGSRLKDNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPL
FMIRFGQSKLYRSEDYGKSFQDVTDLINNTFIQSEFGIAIGPENSGKVILTGDVSDGKAS
RIFRSMDFGKSFYPSDLPFQPIMQIAYNPENSSILTAISITYDLWLSTDFGQSWKKIHDT
VCLVKWGTADTLFFTTNPNGSCSDKGMLELRKTSDNGQSFKTIGSRIYSFGLGGRFIFAS
VMSATSLTRMIHVSVDKGEVWNMAQLPTVGHEQFYSILAANNDMVFMHVDEPGDSGMGTI
YVSDDRGTVFSKSLERHLYTSTGGDTDFTIVSSLRGVYMTSVLAQDGSVQTVVTFDQGGK
WRPLRKPWNGKCDATAGDPGLCSLHIHASYSTSMMLNVPMLPLTEPNAVGLILAHGSVGD
AVSVLSPDVFVSDDGGYTWSQALKGPHHYAILDSGGLLVAVEHNPNQPIFQIKFSTDEGQ
CWHVYNFTDEPIYFTGLASEPGARSMNLSLWGYRESMMSQYWVSVTIDFKQLFSRDCGEG
DYVQWLAHSDNTSDQTDGCLLGFKEKYLRLRKDSVCWNGRDYVISKQPTQCPCTLDDFQC
DFGYYRAENSSECVEQPDLKGHTLEFCLHGRKEQLQTSGYRKIPGDRCEGGKVPERRVID
LSKKCVSNLLRPELLSEAHSGSSAAVIAVVIIVLMISAVAGVLLVKKYVCGGRFLVHRYS
EMQRHVEANGIEGVDDLDTTEAGKTHYNDDSDEDLLA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgagagccgtgtgccgctgtgtgacggtgttgttgttctccgcggttctgtgtgtggat
tttgagggcggagtgcggctcggtcgggggtcccgggctactttcgtgaagagccggaca
cggagctccactcccggcgttagaccggggtctgacccgctgcccgtcggccccgggagg
gtgaagaggagcgagggttccgccgcggactcgtgcggctccctgcggggctatgggtcc
agactaaaggacaacacgcacacttacgcctttaatgatctgagcggctctgtgtccctc
gcctgggtcggagatggaacaggggtgcttttggtcctcaccacatttcaggtgcctctg
ttcatgatccgctttggccagtccaaactgtacaggagcgaagactatggaaagtccttt
caggatgtcaccgatctcatcaacaacaccttcatccagtcagagtttggcattgccatt
ggcccagagaactcaggaaaggtgatcctcacaggtgatgtgtctgatggtaaggcctcc
cggatcttccgctcgatggactttgggaagagtttttatccctcggatttaccgttccag
cccataatgcagattgcctacaacccagaaaacagcagcattcttactgccatcagcatc
acgtatgacctgtggctctctacagattttggacaaagctggaaaaagattcatgacaca
gtgtgtctggtgaaatggggtactgctgatactctcttctttaccacaaatcccaatgga
tcctgcagtgacaagggaatgctggaactgaggaagacgtcagacaatggtcaaagcttt
aagactattgggagcaggatctactcctttgggctgggaggtcgctttattttcgcttca
gtcatgtctgccacgagtttgacgcgcatgatccacgtgtctgtggataagggtgaggtg
tggaacatggcccagctgcccacagtgggacacgagcagttttactccatactggctgcc
aacaacgacatggtgttcatgcacgtggacgaacctggagactctgggatgggcaccatc
tacgtgtcggatgaccgaggcaccgtgttctccaagtcccttgagcgccatctctacaca
tccacagggggcgacactgacttcaccattgtctcctctctcaggggggtctacatgacc
agtgtgctggctcaggatggttccgttcagaccgtggtgacattcgatcaagggggtaaa
tggagacccctccggaaaccctggaatgggaaatgtgacgccaccgcaggggaccctggc
ttgtgcagtctacacatccacgcctcctacagcacatccatgatgctcaatgtgccgatg
ctgcctctgaccgagcccaatgctgtcggactcatcctcgctcatggcagtgtaggtgac
gccgtgtccgttttgtctcctgatgtcttcgtttctgatgacggcggatacacatggtca
caggcactcaagggaccccaccactatgccatcctagactcaggaggactgctggtggct
gtggaacacaaccctaatcagcccatcttccagattaaattttccacagacgagggccag
tgttggcatgtgtacaacttcacagatgagccgatatacttcacggggttggcgtctgag
cctggagctcggtccatgaacctcagtctgtggggttatagggagtccatgatgagtcag
tactgggtgtctgtcactatagacttcaagcagcttttctccagagattgtggggagggg
gattacgtgcagtggctggcccactccgacaacacaagtgatcagactgatggctgcttg
ctgggatttaaggaaaagtatctaaggttacggaaagactccgtatgctggaacggaaga
gactacgtcatctccaagcagccgacacaatgcccgtgcacactggatgatttccagtgt
gactttggatactaccgggcagagaacagctcagagtgtgtggagcagccggatctgaag
ggccacacgcttgagttctgtctacacggccgtaaagagcagctgcagactagtggttac
aggaagatccccggggaccgatgtgaggggggcaaagtacccgagaggcgagtgattgac
ctgagcaagaagtgtgtcagtaacctgctgaggccagagctactgtcggaggctcactct
ggcagctcggctgcagtaatcgctgtagtgatcatagttctgatgatcagtgctgtggct
ggggttcttctggtcaagaagtacgtctgtggaggaaggttcctggttcatcgctactca
gagatgcagaggcatgtggaagctaatggcattgagggagtggacgacctggacactaca
gaggcagggaagactcattacaatgacgactctgatgaggacctgctggcctga

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