Astyanax mexicanus (Mexican tetra): 103040265
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Entry
103040265 CDS
T05042
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103040265 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
amex04031
]
103040265 (trim23)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103040265 (trim23)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103040265 (trim23)
GTP-binding proteins [BR:
amex04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
103040265 (trim23)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
FemAB
Motif
Other DBs
NCBI-GeneID:
103040265
NCBI-ProteinID:
XP_007255072
Ensembl:
ENSAMXG00000038969
UniProt:
A0A8B9J7Y0
A0A3B1IYA1
LinkDB
All DBs
Position
20:complement(22838756..22851524)
Genome browser
AA seq
577 aa
AA seq
DB search
MAAAVNKQGAAAPMEPCVRHVRATTGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCH
DCLTRLPLHGRAVRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGASNQSGMSEDAL
REMGECIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEKTL
CPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAHCI
RTFTEEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAENARSCVRAYFADLHE
TLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAK
QEINRLLETLQKQQQQFTEMADHVQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGK
TTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVF
VIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKLCC
GRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgtaaataagcaaggagccgcagcaccgatggagccttgtgtccggcac
gtaagggccacaacaggcaatacggtgaaggttttggagtgtggagtctgtgaagacgta
ttttcactgcaaggagacaaggtgcctcggctactgctgtgcggtcacactgtttgccat
gactgcctgacccgcctgcctctccatggcagggctgtgcggtgtccatttgacaggcag
gccactgagctgggggactcgggtgtctggggcctgaagaagaactttgcactgctagaa
cttcttgaacggcttcagaacggtgcctcaaaccagtcagggatgtcggaggacgcactg
cgagagatgggagagtgcatcatacgctgtgatgaggacgaaagccacactgcctcaatg
tactgcacggtgtgcgccacccatttatgcgccgagtgctcccagctcacacactccacc
cgcacactggccaagcaccgccgcgttcctctggcagataagcctcacgagaagaccctg
tgccctcagcaccaggtgcacgccatcgagtttgtctgcttggaggacggctgccagcca
ggcccgcttatgtgctgcgtctgcaaggagtatggcaagcatcaaggacataagcacgca
gttctggaggcagaggcgaaccagatccgtgcctccattttggacatggctcactgtatc
cgtaccttcactgaggaagtatctgaatactccaggaagctcgtgggcatcgtgcagcag
attgaaggcggtgaacagattgtggaagatggtgtaggcatggcccacacagaacatgtg
ccgggcactgcagagaatgctcgatcgtgtgtgcgggcgtatttcgccgacctgcacgag
acgctgtgccgtcaggaggagatggcgctcagcgtggtagatgctcatgtgagggagagg
ctgatctggcttcggcagcagcaggaggacatgactatcctgctgtctcaggtgtccacg
gcctgcctgcactgtgaaaagactctgcagcaggatgactgcagggttgtcttggcaaag
caggagataaacaggctgctggagactctgcagaagcagcagcagcagttcacagagatg
gctgaccatgttcagttggatgcaggcatcccagtcacattcacaaaggacaaccgtgtg
cacattggccccaagatggagatccgggtagtgacactgggtttggatggcgctggaaaa
acaaccattcttttcaaattgaaacaggatgagttcatgcagcccataccaactataggt
tttaatgtagaaactgttgagtacaaaaatctgaaattcaccatctgggatgtgggtgga
aagcataaactccgacccctgtggaagcactattatctgaacacacaagccgtggtgttt
gtgatcgacagctgccacagggacaggctgatggaggcccacagtgagctggccaagctc
ctgactgagaaagagctgagagacgctcttctgcttatctttgccaacaaacaggatgtt
cccggggctgtctcggtggaggagatgacggagctgctgagcctacacaagctctgctgt
ggccggagctggcacattcagggctgtgatgcacggagtggcatgggcctccacgagggc
ctggactggctctcacgccagctggtggctgctggggtcctggatgtggcctga
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