Astyanax mexicanus (Mexican tetra): 103040314
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Entry
103040314 CDS
T05042
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103040314 (msx2b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
103040314 (msx2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
103040314
NCBI-ProteinID:
XP_007247071
Ensembl:
ENSAMXG00000041559
UniProt:
A0A8B9JMS7
A0A3B1IFQ0
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All DBs
Position
17:complement(21887055..21892497)
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AA seq
227 aa
AA seq
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MEERKLPVSSHPFSVESLMAREGRRSPADGSWASLAKAQLSAYRNEEPCSPEESRRLFLQ
SSPVKSESPEPEDCTAWAVNPSFPQTRQVSPPCALRKHKTNRKPRTPFTTSQLLALERKF
RQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKRLQEAELEKLKLAAKPALHPGFP
LPLPLGTQFHSAVSLYGQSYHYQRPLLSVPPVGLYGTPLAYGMYHLA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcggaaactcccagtctccagccacccgttcagcgtggagtcgctcatggcc
cgggaggggcgccgcagccccgcggacgggtcctgggcctcgctcgccaaggctcagctc
tccgcgtaccgaaacgaggagccgtgcagcccggaggagagccggagactcttcctccag
agctccccggtgaagtccgagtccccggagccggaggactgcacggcctgggctgtcaac
ccctcattcccccagacccgccaggtgagtccaccctgcgccctccgcaagcacaagacc
aatcgtaagccccgcactcccttcaccacctcgcagctcctggccttggagcgcaagttc
aggcagaagcagtacctgtccatcgcagagcgagccgagttctccagctccctcacgctc
acagagacgcaggtaaagatctggttccagaaccggcgggccaaggccaagcggctgcag
gaggccgagctggagaaactgaagctggccgccaaaccggcactgcacccgggctttccc
ctacccctccccctcgggacacagttccattcggcagtgtcgctctacggacagtcgtat
cactaccagaggccactgctgtctgttccccctgtaggactgtacggaacgccgctggct
tacggcatgtatcacctggcgtga
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