Astyanax mexicanus (Mexican tetra): 103040321
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Entry
103040321 CDS
T05042
Symbol
boc
Name
(RefSeq) brother of CDO
KO
K20020
brother of CDO
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103040321 (boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103040321 (boc)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
Other
103040321 (boc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
Fn3_ROS1
C2-set_2
Ig_5
Ig_SEMA-3_4_7A
BiPBP_C
Ig_4
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
103040321
NCBI-ProteinID:
XP_007249081
Ensembl:
ENSAMXG00000014704
UniProt:
A0A8B9KIE7
LinkDB
All DBs
Position
1:complement(96012674..96052333)
Genome browser
AA seq
1043 aa
AA seq
DB search
MSGIPWKRRFQVLFAVSSALLCLQSTTAAAAASTAALSDADVPVFMEEPLSVVQKLGGSV
TLRCSARPAQAQISWRLNGRELGGGGEEAELGLLLQPGALIIPSLSNSTVGRYQCIASTS
AGARASVPANVTAAKLRDFEPDDQQEIEVDEGNTAVIECHLPESQPKAQVRYSVKQEWLE
TSKGNYLIMPSGNLQIANATQEDEGPYKCAAYNPVTQEVKTSSSTDRLRIRRSTSEAARI
IYPPASRSMTVRKGHRLVLECVASGTPTPQVTWAKNGHNLQPQNNTRFLLSNLLIDAVGE
SDSGTYACHAHNGMGSPGTATVLYDVQVIEAPKVRVELQQQDPVWGDTVKFTCQVQGNPT
PTVMWLHNAQPLSPSSHHRVSSQTLRVLNVGPQDDGVYQCMAENWVGGAQAAARLLTGPS
APSRPGRLPLIRPMSPDKVLRELIPARPVVPSADVLVDCSEILGKISPAEAPVILSQPRT
GTADYYELIWEPRHDGGAPVLEYIIKYRKAGDSLGEWTIKNISGFENKLTLARLQPASLY
EVEMAAKNCAGLGQPAMMTFRTGKGRKSPGGTVERPRQVAPPRLSPPEAPDRPTVTTASE
TSAYVTWIPRGNRGFPIQCFRVEYKKLRKEGGGGGSEWEVAEDNIAPSRLSVQIKGLDKG
TSYKFRVLAVNVLGASPPSAPSKAYTVMGSSQTNLRPVDGPYITYAEAINETTIILKWTY
SPVNNTPIYGFYIYYRPTDSDNDSDYKRDVVDGDRYWHAITGLQPETAYDIKMQCYNEGG
VSEYGNVVILETKARPNQKHTTPETSSHPPETGGPVPRPSDLPYLIVGVVVLGALVFIIV
AFIPFCLWRAWAKQKQTSDMCFPPVATPLPSCQYTMVPLQGMALVGHCPLDSRLTPGHAV
YAPKGEYTANGKHHCLPGLHQENADCEMECGTLLPQRLSNGHPHSYHYSNGIPAHVEEEG
SCEPDDSSLELLSPQSEHPEHTQENHTLSETLHSEEEEIPADLPLLTTSVNTGTSVALQD
TTSQEVSTIQRENQLEELGPWNG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggataccttggaaaagaaggttccaggtgctatttgctgtaagttcagcactg
ctgtgcctgcagagtactactgctgctgctgctgcctccactgctgctctcagtgatgct
gacgtccctgtgtttatggaggagccgctgtcggtggtgcagaagttgggtggcagcgtt
accctgcgctgcagcgcccgtcccgctcaggctcagatcagctggcgtctaaacgggcgt
gagctaggtggcggtggtgaggaggcggagctcggcctgctgctgcagcccggagctctg
attattccctccctctccaactccactgtgggccgatatcagtgcattgccagcaccagc
gctggagcccgcgctagtgttcccgctaacgtcactgcagccaaactgcgagactttgag
cctgacgaccagcaggagattgaagtggatgaggggaacacagcggtgatcgagtgccac
ctaccagagagtcagccaaaagcccaggtccgctacagcgtcaagcaggaatggcttgag
acatctaaagggaattacctcatcatgccatcagggaacctgcagatagccaatgccacc
caggaggatgaggggccttacaagtgtgctgcctacaacccagttacccaggaggtcaaa
acttccagctctactgatcgacttcgtatacgacgttctacatcagaagcagcacggatc
atctacccgcctgcatcgcgctctatgacagtgcgaaaaggccaccgattggtgctggag
tgtgtggccagtgggacccccactccacaggtcacctgggcaaaaaacgggcataacctg
cagccgcaaaacaacactcgcttcctgctcagtaacctgctgatcgacgctgtgggtgag
agcgactcgggcacctacgcctgccatgctcacaatggcatgggctcgccaggaacagcc
actgtgctctacgatgtacaagtgatcgaggctcctaaggtgcgagtggagctgcagcag
caggaccctgtgtggggtgacacggtgaagtttacctgtcaggttcaagggaaccccacc
cccactgtgatgtggcttcacaatgcacagcccctcagcccatcctctcatcatcgtgtc
tcttcccagacgctgcgtgttctgaatgtggggccacaggatgacggggtgtatcagtgc
atggctgagaactgggtgggcggagctcaagctgcagcacgactccttactgggccttca
gcaccttctcggccaggccggctacctctcattcgccccatgagccctgataaggtttta
cgggagctgattccagcccgacctgtggttcccagtgcagatgtgcttgtggactgctca
gaaattctggggaaaatttctccagccgaggctccggtcattcttagccagccgcgcaca
ggaacagctgactactacgagctcatctgggaaccaaggcacgatggtggagctccagtg
ctggagtacatcataaaatacagaaaggctggagactctttaggtgaatggaccatcaag
aacatctctggtttcgagaataagctgactcttgccagattacagccagccagtctgtat
gaagtggagatggccgctaagaactgtgctggactcggtcagcctgccatgatgaccttt
agaactggcaaaggtcgcaaaagtccaggtggaacagtagagcgtcccagacaagtggca
ccgccacgtttgtctccccctgaagctccagatagacccacagtaaccacagcatcagaa
acctctgcatacgtaacctggattccccgcggaaaccgaggcttccctattcagtgcttc
cgtgtggagtataagaagctgcgtaaggagggaggagggggaggtagcgagtgggaggtg
gcggaggataacatcgctccatctcgcctttcggtgcagatcaaaggcctggataaaggg
acgtcatacaagtttcgtgttttggccgtaaacgttttgggggcgagtcctccgagtgcc
ccctctaaagcctacacagtgatgggcagcagccagactaatctccgccctgtcgacggc
ccttacatcacctatgctgaagccatcaatgagaccaccatcatcctcaagtggacatac
tcaccagtaaataacacccccatctacggcttctacatatactaccgacccactgacagt
gacaatgacagcgactacaagagggatgtagtggatggtgaccgatattggcacgccatc
actggtctgcagccagaaacagcgtatgatattaagatgcagtgttacaatgagggagga
gtgagcgagtatggaaatgtcgtcatcttggaaactaaagctcgacccaaccagaaacac
actacaccagagacctcctctcaccctccggaaactggaggccctgtaccgcgacccagt
gatctgccctacctgatcgtgggtgtggtagttctgggagctcttgttttcatcattgtg
gctttcattccattctgtctgtggagagcctgggccaagcagaaacaaacttcagatatg
tgttttcctcctgtggcgactcctctgccctcctgtcagtacaccatggtgccgttgcag
ggcatggcgctggtaggccactgccctctggactcgcgcctgacccccggacacgctgtc
tatgcacctaaaggagaatacactgccaacgggaaacatcactgcctccctggacttcat
caggagaatgcagattgtgaaatggagtgtgggacactgctgccgcaaagactttctaat
ggtcatccacattcctatcactactctaacggcatccctgcccatgtggaagaggagggc
agctgtgagcctgatgattcctcattagagctcctcagtccacagtctgaacaccctgaa
cacacgcaggagaaccacactctgtctgagacactgcactcagaggaagaagagatacct
gcagacctgccactgttaacaacatcagtcaacactggcacctcagtggcactgcaagat
acaacgtcacaggaagtcagcacgatccagcgtgaaaatcagctagaagagttggggccg
tggaatggatga
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integrated database retrieval system
