Astyanax mexicanus (Mexican tetra): 103040388
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Entry
103040388 CDS
T05042
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103040388 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103040388 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
103040388 (myom1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
C2-set_3
C2-set_2
sCache_4
Motif
Other DBs
NCBI-GeneID:
103040388
NCBI-ProteinID:
XP_049338419
Ensembl:
ENSAMXG00000018158
LinkDB
All DBs
Position
8:40305341..40384035
Genome browser
AA seq
1483 aa
AA seq
DB search
MSASSQVQKEERNLETRYESSYHQSSLSSVSHQSYAAHTSFEGVKTSKTKKQEKKLTALS
KKDKRRHLALDTEDEVIGYVVPVFRSSHLATQELMETQEEVKEEGVGYVVMRNLFARDSA
YQVKVEKKSHTKCMRESADRLTLGKKMQEKQEFHKKMNPDSLTHPPEFTVKPRGQTVWEG
KNVTLHCTVAGWPKPRVAWYKNNVLIDAKAHPEKYTAESSYNMHSLEIKKCNFSDTAEYR
ISALNVKGESSAFASVIIKRFKDEEICERPHGYSPEYGVTFRTSIIDKFGVAFGREGETM
SLGCTVVIYPTVKRYQPEVLWYRNDVLLAPSKWVHMHWSGDRATLTLVHLNKEDEGLYTL
RINTKSGFDTHSAYVFVRDTDVEVEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSSPIL
GYFIDRCEVGTQQWIQCNDTPVKYARFPVTGIIEGRSYIFRVSALNKCGVSRPSRVSDPV
VAMDPSDRARLRAGPSAPWTGVIRFTEEDPTVGVIPGSPTDLEVTEATKSYVVLSWKPPL
QRGHEGVMYYIEKCLVGTDTWQRVNTGMPVKSPRFALFDLAEGKSYNFRVRSCNSAGVGE
PSEETGATTVGDRLDLPSAPGPVVAIRNTASSVVVTWGASKEDKSLVRYYIEVSVVGSNV
WVPCNNKPVKGTRFVCHGLNTDDNCLFRVKAVNAAGYSTHSSESEACIVKQSIEVPSPPS
AVTLLERVRDYMVVGWQAPAKTGGADIRGYYLDYRTVKGNVKSKWHEVNLKAVTTTTYKV
ENLKENLFYQFQVRAVNQTGISEGSVPSTPFECKEWTVAVPGPSHGLRVLEVRKDSMVLL
WEPPTFNGRSSVTGYYVDIKEEKGKWRGVQERSTKETYMKISGLKEGTSYQLCVFAKNVV
GVGGPSKSLGPVVAETRPGTNEIVVDVDDDGVISMIFECSEMSEGSQFVWSKNYKALTDT
SRLNIETVGGKSRAIFKDPSLEDLGTYSCVVTNTDGVSSSYTLTEEGLKRLLELSNEHQF
PIIPFKSDMAIELQEKGRVRFWAEVGKFTANCQVEYVFNDNIVTQGKKYTMNFDKNTGII
EMFMDSLEVTDEGTFTFNLVDGKATGRTSLVLIGQEFAELQKKSEFERAEWVRKQGPHFV
EYLSFEVTPECDVYLKCKVGNIKADTEIAWFKDKIEIEEGDEDAQKIGITEGVLSFNIGK
LVIKMEKEEKKKPSKAAAEEAPRKPKLSKKDAGVYEVKLKDERGKDSTLLDLTDAGYQAV
LNEMFRVIANSSTELQIQSTEQGIILYSNVVYHTEELRVGWLLKESKISHSDRVQCGVTG
EQLWLKIKEPTDKDKGKYAIDIFDGSAGVKRVLDLSGKVWDEAFAEFQRLKAAAIAERNR
ARVVGGLPDVVTIQEGKSLNLTGNVWGDPVPEVSWTKNDKVLQPDEHYTLKFEHGKFASM
TIAAVTSVDSGKYALVVKNKYGTEAGEFTVSVYIPEDEAEKKD
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatcctcgcaagtgcagaaggaggagcggaacctggagacgcgctatgaaagc
agctaccaccaaagctcgctgtcctccgtcagccaccagtcctatgcagctcatacgagc
tttgagggggtgaaaacctcaaaaacaaagaagcaggagaagaagctgactgccctctcc
aagaaagacaagcgccgccacctggcactggacaccgaggacgaggtcatcggatacgtg
gtgccggtttttagaagcagtcatttagccactcaggagctgatggagactcaggaggag
gtgaaggaggagggcgtgggctacgtggtcatgaggaacctcttcgccagagactctgct
taccaggtcaaagtggagaagaaaagtcacaccaagtgcatgagggaatccgctgaccgt
ctgaccctgggaaagaagatgcaagagaagcaggagttccacaagaagatgaacccggac
agcctgacccatcctcctgagttcacagtgaagccccgtggtcagacagtgtgggagggc
aagaatgtgacattgcactgcaccgtggccggctggcccaaacctcgtgttgcctggtac
aaaaacaacgtgctcattgatgccaaggcccacccggagaaatacaccgctgagagcagc
tacaacatgcactctctggagatcaagaagtgtaattttagcgacactgcagaatatcgc
atctcagctctgaatgtgaagggggagagctctgcttttgcctcagttattattaaacga
ttcaaagatgaagaaatatgtgaaagaccacatggttatagtcctgaatatggtgtcacc
ttcaggacctccattattgataagtttggagttgcttttggacgagagggagagaccatg
agtttgggctgcacagtcgtcatctacccgactgtcaaacgctaccagcctgaggtgctc
tggtacaggaatgatgttctcctggcaccatctaagtgggtgcacatgcactggagtggg
gatcgggccacgctgaccctggtccacctcaacaaagaagatgaggggctttacaccctg
cgcatcaacaccaagtctggatttgacactcactctgcctatgtgtttgtcagagatact
gatgtggaggtggagggggttcctgttgctcctcttgatgtccgttgtcatgatgctaat
aaagattatgtggtggtaacctggaagcagcctgcggtcgagggaagtagccccattctg
ggctactttatagacaggtgtgaggttggtacccaacaatggatccagtgtaacgacacc
cctgtgaagtatgcccgctttcccgtcactgggatcattgagggccgctcctacatcttc
cgggtgagcgctctcaacaagtgtggagtgagccgtccctcgagggtttctgaccctgtg
gtggccatggacccctctgaccgggcccgtctgagagctggcccctctgctccctggact
ggtgtgattagattcactgaggaagaccccacagttggtgtgatccctggatctcctact
gacctggaagtgactgaggccacaaagagctatgtggtgctcagctggaagcctcctctg
cagagagggcatgagggggtcatgtactacattgagaagtgtctggttggcacagatacc
tggcagagggtgaacactggcatgcctgtgaagtctcctcgtttcgccctgtttgatctg
gctgaggggaaatcctacaacttccgtgtgcgatcctgcaactctgcgggagttggagag
ccatctgaagaaactggggccactactgtgggagacagactggacctgccctcagcccca
gggcctgttgtggccatcaggaacacggcctcctctgtcgtggtcacctggggcgcctcc
aaggaggacaagtctctggtgcgctactacatcgaggtcagtgtggtgggaagcaacgtg
tgggtgccctgcaacaacaagccagttaaaggcaccaggtttgtgtgccacgggctgaac
actgatgataactgcttgttcagagtgaaggcggtgaatgctgccggctacagcacgcac
tcctccgagtctgaagcctgcattgtgaaacaaagcattgaggtcccctcacctccctct
gctgtgaccctgctggagcgggtgcgtgactacatggtggtgggctggcaggctcctgca
aagacagggggagccgacatcaggggctactacctggactacaggaccgtgaaaggaaat
gttaagagcaagtggcatgaggtcaacctgaaggcagtcactaccactacctataaggtg
gagaacttgaaggagaacctcttctaccagttccaggtgcgcgcagtcaaccagactggc
atcagcgagggttctgtccccagtactccatttgaatgtaaggagtggaccgtcgcagtg
ccaggaccttctcatggcctgcgtgtgctggaggtgcgtaaggactccatggtgctgctg
tgggagccgcccacattcaacggccgcagttccgtcactgggtactacgtggacatcaag
gaggagaagggcaaatggagaggtgttcaggaaagatccaccaaggaaacatatatgaag
atatctggactgaaggaaggcacctcctaccagctgtgtgtgttcgctaagaacgtggtt
ggcgttggtggaccatcgaaatccttgggccctgttgtcgcagagacccgacctggcacc
aatgagattgtggtggacgtggacgacgacggtgtgatctccatgatcttcgagtgctca
gagatgtccgaaggttctcagtttgtgtggtccaagaactacaaggccctcaccgatacc
tctcgcctcaacatcgaaacagtcgggggcaaatccagagccatcttcaaggacccctcc
ctggaggacctgggcacctactcctgtgtggtcaccaacactgatggagtttcttccagc
tacactctgacagaggaaggtctgaagcgcttgttggaactcagcaatgaacaccagttc
cccattattcccttcaagtctgatatggccattgagcttcaggagaagggacgcgtgcgt
ttctgggctgaagtgggcaagtttactgctaactgccaagtggaatatgtcttcaatgac
aacattgttactcaaggaaagaaatacacaatgaactttgacaagaacaccggcattatt
gagatgtttatggactccctggaagttactgatgaaggaaccttcacatttaacctcgtt
gatggcaaagctactggacggaccagcttggtgcttattggacaagaatttgctgagctt
cagaagaagtctgagtttgagagagctgagtgggtcaggaaacaaggtcctcactttgtg
gagtacctcagtttcgaggtcacaccagaatgtgacgtgtatctgaaatgcaaggtaggg
aatatcaaagctgacactgagatagcctggtttaaggataaaattgagatcgaggagggc
gatgaagatgcgcagaagattggcatcactgaaggagtgctatccttcaacatcggcaag
cttgttattaagatggaaaaagaagaaaaaaagaaaccctctaaagctgctgcagaagaa
gccccaaggaaaccaaaactctccaagaaggatgcaggtgtctatgaggtcaaactgaag
gatgagagaggaaaggacagtactctgctggatctgacagatgcaggctatcaggccgtg
ctgaatgagatgttcagagttatagccaactcctccaccgagctccagattcagagcaca
gaacaaggcatcatcctttactccaacgtagtgtaccacactgaggaacttcgtgttggc
tggcttctcaaggaatcaaagatctcccattcagacagagtgcagtgcggagtaacagga
gagcagctgtggctgaaaatcaaggagcccacagacaaggacaagggcaaatatgccatc
gacatcttcgatggctctgcgggcgtcaagagggttcttgaccttagcggaaaagtttgg
gacgaagcctttgcagagttccagaggttgaaggcggcagccatcgcagagagaaaccgg
gcccgtgtggtgggaggcctgccagatgtggtcactatccaggagggcaagtccctgaac
ctcactggcaatgtatggggcgaccctgtacctgaagtgagctggacaaagaacgacaag
gtcctgcagccagacgaacactacacgctgaagttcgagcacggcaagttcgccagcatg
accatcgcggcagtcacctcggtcgactcaggcaaatacgccctggtggtgaagaacaag
tacggcacggaagccggcgagttcaccgtcagcgtctacatcccagaggatgaggcggag
aagaaagactag
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integrated database retrieval system
