Astyanax mexicanus (Mexican tetra): 103040396
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Entry
103040396 CDS
T05042
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X9
KO
K24495
myomesin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103040396 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103040396 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
103040396 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
C2-set_3
Ig_J_second
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
103040396
NCBI-ProteinID:
XP_007240100
Ensembl:
ENSAMXG00000011331
LinkDB
All DBs
Position
8:complement(35125970..35184936)
Genome browser
AA seq
1468 aa
AA seq
DB search
MSGSMPFYQKHHRHYDRNYRSRETESAVSQYQQTSSRYSARSSSSTQGIRAATFTSLDEG
RLSPMPKRSEPTYLAMDKENQIIGYVVPIFRGSKEFASGLSDTEDMRAKETAGYLARRDL
FTSGVEMERMEQKSRRTVMRESAERISLTKRIHENEEYHKRLNEDSLMHPPEFVIKPRSH
TVWEKQSVRLHCTVSGWPEPRVVWYKNNVSIDPMSNPGKYKVESSYSVHSLEINRCDFDD
TAQYRVSAMNSKGELSAIASVVVKRFKGEVEESLPAPRPHPCLEYGITFETHIVEKFGVS
FGNEGETLSLGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWVQVHWSGDRATLTLTHLNK
EDEGLYTLRVITKSGYETHSAYVFVRDSDAEVAGAPGAPLDVYCQEANKDYVIVTWKQPA
VDGGNSILGYFVDRCEVGTTHWSQCNDTPVKFARFPVTGLVEGRSYVFRVRAVNKCGMSH
PSRVSEPAVAMDPADRARKGASAPWTGQIIVTEEEPVEGVVPGKPRDLMVTESTKTYVVL
SWKPPGEKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYCFRVRCCN
SAGVGEPSDPTEATVVGDKLDIPSAPGRVIPTRNTDTSVVVAWEASRDAKDLVGYYIENS
VAGSNVWEPCNNKPVKATRFICHGLTTGEKYVFRVRAVNAAGISEFSQESEAIEVKAAIG
GGIPHASPAPPFGITVLESVRDSMVLGWKQPTFIGGADIVGYFVDYREVIDGVPGKWHEA
NIKAVSDRAYRVSELKENRLYQFQVRAANMAGVGIPSLPSATFKCEEWTIAVPGPPHDLQ
VLEVRKDSLVLLWKAPVYQGRDAVNGYYVDIKEADADFETWRGVNEKATSKKYMKIRDLK
DGVSYVFRVRAQNKAGVGKASEPTEPVLAETKPGTKELVVEVDDDGVISLNFECENLNAE
SKFVWSKNYEEITDSARLTMETKGNKSKATFNAPSEDDLGIYSCIITHTDGASASYNLTE
EGLKELLKVSHDHKFPIIPLKSELAVELLEKGRVRFWLQAEKISASGKVEYVFNDNIINQ
GEKYKMNFDKNTGIIEMFMDSLQKEDEGTFTFQLQDGKATNQSSLVLIGDVFKQLQKESE
FQRKEWHRKQGPHFVEYLNYEVTSECIVRLKCKVGNIRKETVALWYKDGREIKANEKLDF
SEGVLSLEIAQISKKDAGVYEVIVKDDRGTDKSTLNLTDQGFKDLMNQVFSVIANSSTPL
KIQSSEQGIRLYTFVNYYNDELHVTWHHKEAAIAFTDRITSGVVGEQLWLQISEPTEKDK
GKYAIEFFDGKGGLKRTVELSGQAYDDAFAEFQRLKAAAIAERNRARVAGGLPDVVTIQE
GKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFESGKFASFTITTVNTNDSGKYSI
LVKNKYGTESGDFTVSVFIPDEEHGKRK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcaatgccgttctaccagaagcaccaccgtcactatgaccgtaactatcgt
agccgggagacagagtctgcggtcagccagtaccagcagacgtccagcagatactccgcc
cgcagcagcagctccacccagggcatcagagccgccaccttcacttctttggatgagggg
aggctgagtcctatgccaaagaggtccgagcccacctacctggccatggataaagaaaac
cagattataggctatgtggtgcccatcttcaggggcagtaaggagtttgcgagtggcctg
tcagacaccgaagacatgcgggctaaagagaccgccggctatctggcccgcagagacctc
tttactagcggggtggagatggagcgcatggagcaaaaatctcgcagaaccgtcatgagg
gagtcagcagaacgcatttcccttaccaagaggatccatgaaaacgaagagtaccacaag
cgtctgaacgaagatagcctgatgcatcccccggagtttgtgatcaagccccgctcacac
actgtgtgggagaaacagagtgtgaggctgcactgcaccgtctcaggatggcccgagcct
cgagtggtgtggtacaagaacaatgttagcattgaccccatgtcaaacccagggaagtac
aaggttgagagcagctacagcgtccactctctggagatcaacagatgtgactttgatgac
acggcccagtatcgtgtgtcagcaatgaacagcaaaggggaactttctgctattgcttct
gtcgttgtcaaaagattcaaaggtgaagtggaagagtctctgccagctcccagaccccac
ccctgccttgagtatggcattactttcgagacacacattgtggagaagtttggagtgtca
tttgggaatgagggagagactctgagcctgggctgctctgttatcatctacccttcactg
cagcgcttccagcctgagattgagtggtacagagatgacaagttgctggtgccatctaag
tgggttcaggtgcactggagtggagacagagccacgctcacactcacacacctcaacaaa
gaggacgagggtctttacacacttcgcgtcatcaccaagtctggctatgagacacactct
gcctatgtcttcgtcagagattctgatgcggaggttgcaggagctcctggtgcacctctt
gatgtgtactgtcaggaagccaataaagactatgtcatcgttacttggaaacagcctgct
gtggatggagggaactccattctcggctactttgtggacaggtgtgaagttggtaccact
cactggtctcagtgcaatgacactccagtgaagttcgcccggttccctgtcactggtctg
gtagagggccgcagctatgttttccgtgtgcgcgctgtaaataaatgtggcatgagtcat
ccttctcgtgtgtccgaacccgcggttgccatggaccctgctgaccgtgctcgtaaagga
gcctctgccccatggactggtcagatcattgtgaccgaagaggagcctgtcgagggtgtg
gttcctggcaaaccacgtgacttgatggttactgagtcaaccaagacctatgtggtgctg
agctggaagcctccaggcgagaagggacatgagggggtcatgtactatgttgagaagtgt
gtgtctggcacagacagctggcagcgtgtgaacaccgagattccggtgaagtctccacgc
tttgcactctttgacttggctgaggggaagtcctactgtttccgtgtccgatgctgcaac
tctgctggtgtgggtgaaccctcagatcccactgaggccactgtagtgggagacaaactg
gacatcccgtcagctccaggtcgtgtgatacccacccgtaacacagacacttctgtagtg
gtggcgtgggaggcgtcacgtgatgctaaggatctggtgggctactacattgagaacagt
gttgccggtagcaatgtttgggagccctgcaacaacaaacctgtcaaggccaccaggttt
atatgtcatggcttgacgacaggtgagaagtatgttttccgtgtaagagcagttaacgct
gctggaatcagtgagttctcacaggagtctgaagccattgaagttaaagctgcaattggg
ggcggtattcctcatgcctctcctgctccaccttttggcatcactgtgctggaaagcgtg
cgggactccatggtgcttggctggaagcagcctactttcattggtggtgccgacatcgtt
gggtactttgtggattaccgggaggttatcgatggagtgcctggaaaatggcatgaggct
aacatcaaggcagtcagtgaccgagcatacagggtgtcagagctaaaagagaataggctg
tatcagttccaggtccgtgctgcaaacatggctggggtgggcatcccgtctttgcccagt
gctacatttaaatgtgaagagtggaccattgctgtgccaggacccccacatgacctccag
gtgctggaggtgcgtaaggactctctagtgttgctctggaaagcaccagtgtaccagggg
cgtgatgcggtcaatggctattatgttgacatcaaagaggctgatgcagacttcgagact
tggagaggggtcaatgagaaagccacaagcaagaaatacatgaagattagggatctgaaa
gatggcgtttcgtatgttttccgtgtccgtgctcagaacaaagccggggtgggcaaagct
tctgaaccaacagagcctgtgctggctgagaccaaaccaggcaccaaggagctggttgta
gaagttgatgatgatggcgtgatttcactgaactttgaatgtgaaaacctcaacgctgag
tctaagtttgtctggtccaaaaactatgaggaaattacagactctgcacgccttaccatg
gagaccaagggcaacaagtccaaagccacgtttaatgctccttctgaggatgacctgggc
atctactcctgcatcatcacacatactgatggtgcctctgctagctacaacctgactgag
gagggcctgaaagagctgttgaaggtcagccatgaccacaaattccctattattccactt
aagtctgagctggctgttgagctgctggagaagggtagggttcgtttttggctgcaagct
gagaagatatctgccagtgggaaagtcgaatatgtctttaatgacaacattatcaaccaa
ggagagaaatataagatgaacttcgataagaataccggcatcattgagatgttcatggac
tcgctgcagaaagaggatgaaggaacgtttactttccagctccaggatggcaaagccacc
aaccagtccagcctggtgctaataggagatgttttcaagcagctgcagaaggaatctgag
ttccagaggaaggaatggcacaggaaacaaggtcctcactttgtggagtatctcaattat
gaagtcacttctgagtgcattgtgagactgaagtgcaaggttggcaacataaggaaggaa
acagtggcactgtggtataaggatggaagagagattaaagccaatgagaaactggacttc
tctgagggagtgctgtccctggagatcgcccagatctctaagaaggatgcaggtgtgtat
gaggtgatcgtgaaggatgacagaggaacagataaatccactctcaacctgactgaccaa
ggatttaaggatctgatgaaccaagtcttcagtgttattgctaactcctccactcctctg
aagatccagagctcagaacagggcatccgcctctacaccttcgtcaactattacaatgat
gaactgcacgtcacctggcatcacaaggaggctgctattgcgtttactgatcgcattacc
agtggtgtggtgggagagcagctgtggttgcagatttctgaacccactgagaaagacaag
ggcaaatacgccattgagttcttcgacgggaaaggaggactgaagagaacagtggagctg
tctggacaagcatatgatgatgcgtttgcagaattccaaagactcaaagctgcagccatt
gcagaaagaaaccgtgctcgtgtggcaggaggtctgcctgatgtggttaccatccaggag
ggcaaggctctgaatctcacatgtaatatctcgggtgacccggtgccagaagtgacctgg
ctgaagaacgagagagagatggtgtcggacgatcattacatcctaaagtttgagtctgga
aagtttgccagcttcaccatcaccaccgtcaacaccaacgactcaggcaaatacagcatc
ctggtcaaaaacaagtacggcacggagagcggagacttcaccgtaagtgtcttcatccct
gacgaggagcacggcaagagaaagtag
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integrated database retrieval system
