Astyanax mexicanus (Mexican tetra): 103040400
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Entry
103040400 CDS
T05042
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103040400 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103040400 (lrrc4bb)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
NGL family
103040400 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
V-set
LRR_14
LRRNT
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
103040400
NCBI-ProteinID:
XP_049336521
LinkDB
All DBs
Position
6:complement(57808065..57828130)
Genome browser
AA seq
732 aa
AA seq
DB search
MWAAMVTGLSSPSPLLWLVQLLLWPHLSGPRLAEASPPCPAPCSCSNQASRVICTRKGLD
EVPQSISVNTRYLNLQENSIQLIKSDTFKHLSHLEILQLSKNHIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLVNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISLIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQEVHDSARQFVNETFISFPGPT
AASASPGPSGSALSSLAPHATRAPDRPFTVSVITDMANLSGLEDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEMGPAGGASGIAGGSTVHCSGAGT
GGTGQSLRIHDPEIVTLPNIGRADHVNHYYKPHHFNNNVLGLSVGPGQSGGILNNKTSPT
SKKQGVSMNTTTAGSCDSNNHGSTGSPPLPIPIPMAMAFHGTLKSLSHTPSTQTEPLLLS
NGSKESVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatggtgacaggcctctccagcccctcccccctcctttggttggtccag
ctgctgttatggccacatctcagtggacccagattagctgaggccagtcccccttgcccc
gccccctgtagctgctccaatcaggcgagtcgagtgatttgcaccaggaagggcttggat
gaagttccacagagtatctcagtcaacacgcgatacctcaacctgcaggagaactccata
cagctgatcaagtcagacacctttaagcacctgagtcacctggagattttgcagttgtcc
aagaatcacatccgccagatcgaagtcggagcgtttaatgggctgcccaacctcatcacg
ctcgagctgtttgacaaccggctgccactggtgccatcgcaagccttcgagtacctcagc
aaacttcgagaactctggttgcgaaacaatcccattgagaccctcccggcctacgccttc
caccgcgtcccgtccctgcgacggttggacctgggcgaactgcgtaagctcagcttcatc
tcggaggctgcattcgagggtttggtgaatttacgtttcctcaacttgggaatgtgtggg
ctaaaggacgtgcccaacctgacaccactggtgcgactggaagagctggagttatctggg
aaccagcttggagtggtgcgtcctggatctttccagggtctcgtgtcacttcgcaagctg
tggctcatgcactcccgtatatccttaatcgagcgcaatgcttttgatgacctgaaaaac
ctggaggagctcaatctgtcccacaattctcttcactccctgcctcatgacctgttcacg
cccttgcagcagctggagcgggtacacctgaaccacaacccctgggtgtgtaactgtgat
gttctgtggcttagctggtggctgaaggagaccgtgccggataactccacttgctgtgcc
cgctgccatgctcctcccggaacgaagggccgctacatcggcgacctggaccagagagac
tttacctgctatgcacctgtcattgtcgagccaccaactgatctaaacgtgacagaagga
atggcagcagagcttaagtgccgcactgggacctcaatgacttctgtcaactggctgacc
cctaacggaaccctaatgacacacggcgcctacaaggtacgcatctctgttctgcacgat
ggaaccctgaattttaccaatgtgaccatgcaggacacaggtccctacacctgcatggta
accaactctgctggaaacactacggcgaccgcggtccttaacgtctctgcgtctgatccc
ggcaacggatacagttacttcaccactgttactgtggaaacagttgaaacgggtcaggaa
gtgcatgactcagcacggcaattcgtcaacgagacctttataagttttcccggtccgacg
gccgcgtctgcttcgccgggtccttcgggatctgcgctttcctccctcgcacctcacgct
acccgtgctcccgaccgcccattcaccgtctccgtcatcactgatatggccaatctgtcg
ggcctagaggacgtgatgaagacgacaaagatcatcatcggctgcttcgtggccatcacc
ttcatggcggctgtcatgctggtggtcttctacaagctgcggaagcagcaccagctgcac
aaacatcacggtcctgcccgtgcgattgagatcatcaacgtggaggacgagatgggcccg
gcgggaggtgccagtggcatagccggtgggtccacggtgcactgcagcggagctggaacg
ggaggaaccggacaaagcctgcggatacacgacccggaaatcgtcactctgcccaacatc
ggccgagccgatcacgtcaaccactactacaagcctcaccacttcaacaacaacgttctc
ggactcagcgtgggaccgggacagtccggcggcatcctgaacaacaagaccagccccacc
tccaagaaacagggcgtctccatgaacacgacgacggccggatcctgcgactccaacaac
cacggatccaccggatctccgcctttacccatccccatcccaatggccatggcgttccac
ggtacgctgaagagcctaagccacacccccagcactcagaccgagcctctactgctgtcc
aacgggtccaaggagagtgtgcaggagacacagatctaa
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