Astyanax mexicanus (Mexican tetra): 103040430
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Entry
103040430 CDS
T05042
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex03015
mRNA surveillance pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103040430
09122 Translation
03013 Nucleocytoplasmic transport
103040430
03015 mRNA surveillance pathway
103040430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103040430
03041 Spliceosome [BR:
amex03041
]
103040430
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103040430
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
Cap binding complex
103040430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AAA_11
AAA_13
Vfa1
FapA
DUF7197
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
103040430
NCBI-ProteinID:
XP_007228090
Ensembl:
ENSAMXG00000016364
LinkDB
All DBs
Position
2
Genome browser
AA seq
797 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNFKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSNL
YTEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVFAVLSCLPWV
GKELYEKKDVEMDRLLNQIDGYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQVQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPRVIFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTSCIDRFISWFSHH
LSNFQFRWSWEDWADCLTVDLDKPKPKFVKEVLEKSMRLSYHQRIVDIVPASFSALIPAE
PLFQYKYDDESKSSLPGYPMAITVSNAIKNRASNEELLTILKEVPNPNQEDDDDEGDGFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEVLKALTETDEGKLHILKVVYEAWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSPDMAHDFTRFYMWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKKQKDSGDEEDMEKNNSEDEDGQLEEQIEKLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETASMDINTCWYKNCIERLQQIFLMHHVTIQQYVGTLENLLFTAE
LDHHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggagaaggcacagcgacgagaacgacggaggtcagcctcacaaaaggaggagg
acatctgagccaattgaaatcgaggaccgactagaatcactgatatgcagagttggagaa
aagagtacctcctccttggagagcaatttggaaggccttgcaggtgtcctggaagcagat
ctgcccaatttcaaaaacaaaatcctgcgcatcttgtgtgccgtagcaagacttttgcca
gagaaactgactgtgtacactacactggtgggccttttaaatgcacggaactataacttt
ggtggggagtttgttgaggccatgatcaggcagcttaaggagacactgaagtccaacctc
tacactgaagcggtttacttggtgcgttttcttagcgacctggtgaactgccatgtcatt
gctgctccttctatggttgccatgtttgaaaactttgttagtgtcacccaggaggaagac
ataccacaggtgcgatcggactggtacgtgtttgctgtgctgtcctgtttaccctgggtt
ggaaaggagctctatgagaagaaggatgtggagatggatcgcctgcttaaccagattgat
ggctatctaaagaggcgacagaagacccatgtgccaatgctgcaggtttggacagcagag
aagccacaccctcaagaagagtatctggactgtctgtgggctcaagtgcagaagctgaag
aaggatcgctggcaagagagacacatcctgaggccgtacattgcctttgacagcgtgctc
tgcgaggctctgcagcacaacctgcctcccttcaccccgccagcccattctgacgatgct
gtctaccctatgcctcgcgtcatctttcgcatgtttgactacaccgatgctcctgagggc
cctgtcatgcctggcagtcactctgtggagaggtttgtgattgaagagaacctacactgc
atcatcaaatctcactggagagagaggaagacctgtgctgctcagttgctgagttatcct
ggcaaaaacaagattcctctaaactatcatattgttgaggtgatctttggtgagctattc
cagctgccttctcctcctcatattgatgtcatgtacacggctttactgattgagctctgt
aagctgcagcctggatcattaccccaagttcttgctcaagctacagaaatgatgtacatg
agactggacacaatgaacacatcatgcatagaccggtttatcagttggttctctcatcat
ctgagcaactttcagttcagatggagctgggaagactgggctgattgtttaacggtggac
cttgacaaacccaagcccaaatttgtcaaagaagtgttggagaaatccatgagactctct
tatcaccaacggatcgtagacatcgtgcctgctagtttttctgctctaatcccagctgaa
ccactgttccagtataaatacgatgatgagagcaagagttccttgcctggttatccgatg
gcaataactgtatccaatgctatcaaaaaccgggcttcaaatgaggagcttctcaccatt
ttgaaagaagttcccaatcccaaccaggaggacgatgatgatgaaggagatggcttcaac
cctctgaaaatagatgtgttcctgcagactctgctacatctggctgccaagtctttcagt
cactcgttcagtgcccttgccaagttccatgaagtgctaaaagctctgactgaaactgat
gagggaaagctgcacattcttaaagtggtttatgaggcctggaggaatcacccacagatg
atcgcagtgctggtggacaagatgattcgcactcagatagttgactgtgctgctgtggca
aactggatcttctcccctgacatggctcatgattttaccaggttttacatgtgggagatt
cttcattccactatccggaagatgaacaaacatgtccagaagatccaaaaggagcttgag
gaggccaaggacaaactggagaaacagcagcacaaaaagcagaaggacagtggtgatgaa
gaggacatggagaagaacaacagtgaggacgaggatggacagctggaggagcagattgag
aagctacaggagaaagtggagtcagctcagagtgaacagaagaacctcttccttgtcatc
tttcagcgttttatcatgctgctgacggagcacttagttcgctgtgagacggcaagcatg
gacataaacacctgctggtataagaattgcattgagcggctgcagcagatctttcttatg
catcatgtgaccattcagcagtatgtgggaaccctggagaacctgcttttcacagctgaa
ttggaccaccatatcctggctgtgtaccagcagttctgtgctctgcagctttga
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integrated database retrieval system
