Astyanax mexicanus (Mexican tetra): 103040758
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Entry
103040758 CDS
T05042
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103040758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103040758
Membrane trafficking [BR:
amex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
103040758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
103040758
NCBI-ProteinID:
XP_022537609
Ensembl:
ENSAMXG00000039087
LinkDB
All DBs
Position
25:complement(16238599..17087072)
Genome browser
AA seq
1686 aa
AA seq
DB search
MTKESSLSQWPLWSLVLAGCFLSAWTLEFGGATGQWARYARWEAGSIGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGHLQLRFAIHCAEPASIQMETRVNDDRWHMVLLTRNFRE
TMLMVDGETKVAEVRSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFMGLISNLK
VGEMPPTLLNSQGIQSDLEYLCTKQNPCLNGGFCVVQFGEVHCDCSHTRFRGKYCKEEEE
YSVEGLAHLTLNNQGDSSQVAGKEESVATFKGNEFFCYDLSMTPIQSSTDEITLSFRTLQ
RNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNL
RQHSGIGHAMVNKLHYMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSP
VSNNFMGCLKDVVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFETPES
YIALPRWDTKKTSSISFDFRTTEPSGLLLFSHGKPQGTKEQRHGRELKTDYFAMELLDGF
LFLLMDMGSGSIKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRTMPFNSNEGSEILDL
DSDMYLGGLPETRQGLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSAPGVS
SFCTRELQKRCSSAPCGNAGVCKEGWNRYICDCTGTGFLGSNCEIEATVLSYDGSMYLKI
IMPGTMHTEAEDLALRFMSQRAYGLLVATTSKESADTLRLELDGGRVKLTVNLDCIRIDC
NLSKGPETLYAGQKLNDNEWHAVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETG
IMTERRFISVVPSNFVGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFR
SKGSYLALATLQAYASMHLFFQFKTTSSDGLILYNSGDGSDFIVVELVKGYVHYVFDLGN
GPSLMKGNSDKPLNDNQWHNVVVSRDTNNMHTLKIDSHTVTQHSNGARNLDLKGELYIGG
VGKTMYNSLPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVDRGCDGPSTTCTED
SCLNQGVCLQQWEGFSCDCTMTSYGGSYCSDPGTTYIFGRGGALITYTWPPNDRPSTRAD
RLAVGFSTQLKEAVLVRVESAKGLGDYLELHIERGKIGVIFNVGTDDIAIEESGVVVSDG
KYHVVRFTRSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDDWLLDKG
RQLTIFNSQAFIKIGGGEKGRNFQGQISGLYYNGLQVLKLAAEGDPNVQVQGNLRLVGDV
PSVLTTDTTSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNTDDLLVASAECP
SDDEDLEECEPGGGELVLPIITVDSLDPPSVATRYPVIPPPPTYRPFLTLLDTTKESLSL
PNGRAPCPLDQEDCEEAMEVSAYGSGEMTESDDEDYYKNSPLVTDRTVIPPPPAAENTRG
DRHFSRHPDSHRPPLPSTPTAHPEQLVPRVKPGINSGNNIPAGKMNNRDQVLLPPAQPSG
DPEHGGRHRHIPGITYPPNFPHIPTTDPSSPDRGPPGAVEVIRESSSTTGMVVGIVAAAA
LCILILLYAMYKYRNRDEGSYQVDQTRNYISNSATQSNGALVKEKQSGTTKTGTKSKKNK
DKEYYV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaagctcattatcacagtggcccttgtggtccttagttttagccgggtgc
tttctctcagcatggaccctggagtttggaggagctacaggtcagtgggcccgctatgcc
cgctgggaagcaggctcaattggcgagctcagtttcagcctaaagaccaacataagcaaa
gctctggtgctgtacctcgacgatggagggaactgcgacttcctggagcttctaattgca
ggagggcacctgcagcttcgcttcgccatccactgcgctgagcctgctagcattcagatg
gaaacccgtgtcaatgacgaccgctggcacatggtcctcctcacccgcaactttcgggag
actatgctcatggtggacggtgagaccaaggtggccgaagttcgctccaagcgcaaggaa
atggccgtcgtcagtgatctctttgttggggggattccgcctgatgttcgcctgtctgcc
ctgacgtccagcacagtgaagtatgagcctcctttcatgggcctcatctccaacctgaag
gtgggtgagatgccccctaccctgcttaacagccaaggcattcagagcgacttggagtac
ctgtgtaccaaacagaacccttgtctgaatggaggattctgcgttgtccagttcggggaa
gtgcactgcgactgctcccacactcgtttcagagggaaatactgcaaggaagaagaagaa
tactctgtggaaggtctggcgcacctgacgttaaacaaccaaggtgactcatcccaagtg
gctggtaaagaagaatcagtagccacgttcaaaggcaacgagtttttctgctacgacctg
tcgatgactcccatccagagcagtacagacgagattacgctgtccttccgcacgctgcag
agaaacggcctaatgctccatactggaaaatcggcggattacgtgaacctgtctctgaag
agcggcgccgtgtggctggtcattaacctcggctccggagccttcgaggcgctcgtcgaa
cccgtcaacggcaagtttaacgacaacgcctggcacgatgtgaaggtcacgcgaaacctg
cggcagcactcaggcattggacacgctatggtaaacaaactgcattatatggtgaccata
tcagtggatggtattttgaccaccactggttacacacaggaggattacactatgttaggc
tcggacgatttcttctacatcggtggaagtcccaacactgctgacctccccggatcacca
gtcagcaacaacttcatgggctgtctcaaagatgtcgtttacaagaacaatgacttcaag
ctggagctttctcggctggccatcgaacgcgaccctaaaatcagtctgaatggtgacctg
gtgttccgctgcgaggacgtagccgctctcgaccctgtgaccttcgagacgcccgagtcg
tacatcgcactaccgcgctgggacaccaagaagaccagctccatctccttcgactttcgc
accacggagcccagcggcctgctgctcttcagccacgggaagcctcagggcaccaaggag
cagcggcacgggcgcgagctgaagactgattacttcgccatggagctgctggacggattc
ctcttcctgctgatggacatgggctccggtagcatcaagctcaaggccagcaacaagaag
gtcaatgatggggaatggtgccacgtggactttcagagggaaggaaggaaaggctctatc
tcagtaaacagccgcaccatgcccttcaactccaacgagggcagtgagatattggatctg
gacagtgatatgtaccttggtgggctccctgagactcggcagggcctggtcctgcccccg
gaggtttggacggccctgctgaactacgggtatgtgggctgcgtgcgggacctcttcatc
gatgggaagagccgtgacgtccggaggctggcggagatccagagtgcccccggagtcagc
agcttctgcacccgtgagctccagaagaggtgcagcagcgccccctgtggcaacgcagga
gtctgcaaagaaggctggaaccgctacatctgtgactgcacggggaccggcttcctgggc
agcaactgtgagatagaggccacagtgctgagttatgacggcagcatgtacctgaagatc
atcatgccgggcaccatgcacacggaggccgaggacctagcccttcgcttcatgtcccag
cgagcgtacggcctgctggtggccaccacctccaaagagtccgccgacacactccgtctg
gagctggacggtggacgagtgaagctcaccgttaatttggattgtatcaggatagactgt
aacctcagtaagggtcctgaaactctgtacgccggtcagaagctcaatgataacgagtgg
catgcagtgaaagtggtgcgcagaggcaagaacctgcagctgtctgtggacaacgtcact
gtggaaggtcagatgactggtgcccacacccgtctggagttccataacatcgagacgggc
atcatgacggaaagacgcttcatctccgtcgtcccctccaacttcgtcgggcacctgcaa
gggctgacggtcaacggcgtgccctacctggaccagtgcaaaaatggcgacatctcctac
tgcgaactcaacgcccgcttcggaatgcggcacatcatcgctgacccagtgacttttcga
agtaaaggaagctatctagcgttagcgacgctgcaagcgtacgcctccatgcacttgttc
tttcagttcaagaccaccagctctgatggcctgatcctgtacaacagtggagacggaagt
gacttcattgtggtggagctggtgaaaggatatgtccactatgtgtttgacctggggaat
ggaccctctttgatgaagggcaactcggacaagccgctgaacgacaaccagtggcacaac
gtggtggtttcccgcgacaccaacaacatgcacacactcaagatcgactcccacaccgtc
acccagcactccaatggcgcccgcaacctggacctcaaaggagagctgtatataggtggt
gtggggaagactatgtataacagtctgcccaagctgatcgcgtcccgagacggttaccag
ggctgcctggcgtccgtggacctgaacggcagactgccagacctgatcgcagacgccctc
cacagggtgggccaggtggatcgaggatgcgacggaccgagtaccacctgcacggaggac
tcctgcctgaatcagggagtgtgtctgcagcagtgggagggcttctcatgcgactgcacc
atgacgtcctacggaggctcgtactgcagcgatcccgggactacgtacatcttcggccgc
ggaggagccctcatcacctacacctggccacccaacgaccggccgagtacgcgggcagac
cggttggcggtgggtttcagcacgcagcttaaagaggccgtgctggttcgggtggagagc
gccaagggactcggcgactacctggagctgcacatagagcgggggaagatcggggttatc
ttcaacgtggggacagacgacatagcgatcgaggagagtggtgtggtggtgagcgatggc
aaataccacgtggtgcgcttcaccagaagcggcggaaacgcaacattgcaggtggacaac
cagccggtcattgagcgtttcccttcagggaactttgataatgagcgcctggctattgcc
agacaaagaatcccgtacagacttggtcgggtagtagacgattggctactcgacaaaggt
cggcagttgacgatctttaacagtcaggcgtttataaagatcggtggtggagagaaaggg
aggaattttcagggtcagatttcgggtctgtactataacgggctgcaggtgctgaagttg
gcggccgagggcgacccgaacgtgcaggtgcagggtaacctgcggctagtgggggacgtc
ccctccgtcctgaccacagacaccacctccaccaccccgctggcagacatgtccaccacc
atcatggagaccaccaccaccatggccaccaccaccacccgcaaacagcgctcacccacc
atgagagacagtgtcacacagaacacggatgatctgttagtagcatcagcagaatgtcct
agtgatgatgaggatctagaagagtgcgagcctggtggaggtgaattagtgttgcctatt
ataaccgtggattctctagaccccccttcagttgcaacacgctaccctgttatccctcca
ccccccacctaccgccccttcctcacactgctcgataccaccaaagagtctctgtcactg
cccaatggccgggctccatgcccgctggaccaagaggactgtgaagaggctatggaggtt
tcggcctacggttcgggcgagatgaccgagtcggacgacgaggactattacaaaaactcg
cccctcgtcaccgaccggaccgttatcccccctccccctgccgctgaaaacacccgcggg
gaccgccacttctctcggcaccccgattcccaccgccccccactcccctctacccccact
gcacacccagagcaactcgtcccacgggtcaaacccggcatcaacagtggcaacaatatc
ccggcaggcaaaatgaacaaccgtgatcaggtgcttctacccccggcccagccttccggg
gatcccgagcatggcgggagacacaggcacatccccggtataacctaccccccaaatttc
cctcatatccccaccacagatccctcatctccagaccgaggacccccaggagcagtggag
gtgatccgcgagtccagcagcaccacagggatggtggtgggaatcgtggcagcagccgct
ctctgcatcctcatcctcctctacgccatgtacaaataccgcaaccgcgacgagggctcc
taccaggtggaccagactcgcaactacatcagcaactcagccacacagagcaacggagca
ctggtcaaagagaagcagtccggcacgaccaaaacgggcacaaagagcaagaagaacaaa
gacaaggaatactacgtctga
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