Astyanax mexicanus (Mexican tetra): 103040939
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Entry
103040939 CDS
T05042
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103040939 (brf1a)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103040939 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
103040939
NCBI-ProteinID:
XP_022540812
Ensembl:
ENSAMXG00000020862
LinkDB
All DBs
Position
7:complement(7548132..7646819)
Genome browser
AA seq
675 aa
AA seq
DB search
MRKCKNCGGTNIDVDQTRGDAVCMGCGSVLEDNIIVSEVTFVENSGGGSSAVGQFVASDA
SGNAPSLGGNFTGMGKESRAQTLQNAKRNINHLGHQLQMNQHCLNTAFNFYKMALCKRLT
RGRKSAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLALAKELCINAPAIDP
CLYVPRFAQMLEFGEKSHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMHEFH
RTIKDVIGVVKVCEATLRKRLSEFEDTPTSELTIEEFMRVDLDQECDPPSFKDGLRRVRL
QKIEEELAKKIDEVQGEICGYQDEIEMELESNRPKASGIYAAYSKNDDAVSLMSSICTDI
DEECDDEELRAVASHLNNSSCSNGKPTGEEDEERQDGRDTPLKRPSLEVLLGPLPTAASL
GLSESINKCVGEEKENEHDDASVNGELDLSGIDDEEIDRYILNDKEVQIKTELWLLENAD
YLKEQKEKEERIAKEKELGIYKEKKSRKPPQKRQPINASTADEAIEKMLEQKRISSKINY
DVLKDLNKSAPKSPSTEPKESPAQGNTRRPPARPRKPADPLAGLPLPASTIGKRIRPLIS
AQPSKKQALDQSVLGTPVSVPAAPAQNAVLVESGPVAYEDVGDEDEEEEEEPCVSAMQMM
GGNDYGYDFDDDDGF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtgtaagaactgcggagggacgaatattgatgtggatcagacacgtggagat
gccgtgtgtatgggctgcggctccgtgttggaggacaacatcatagtttctgaggtaacc
ttcgtggagaacagcggcgggggatcgtctgctgtcggacagttcgtggcatcagacgct
agtggaaatgccccttctttgggaggcaactttactgggatgggaaaggagtccagagcc
cagacgctacagaatgccaagcggaacataaaccacctgggtcaccagctgcagatgaac
cagcactgcttaaacacggccttcaacttctacaagatggcgctgtgcaagcggctgacc
cgaggacgcaaatctgcccacgtcatcgcagcctgcctgtacctggtgtgcaggacggag
gggacacctcacatgctgttggacctgagtgatctactgcaggtgaatgtgtatgtcctg
ggaagaaccttcttggcactggcaaaagagctgtgcatcaatgctccagccatagatccc
tgtctgtacgtcccgcgctttgcgcaaatgttggagttcggagagaagagtcacgaggtg
tccatgactgcgctgaggctcgtgcagaggatgaagagggactggatgcacacgggacga
agaccctcgggcctctgcggtgcagccctgctggtcgctgctcgcatgcatgagtttcat
cgaactatcaaagatgtgatcggagtggtgaaagtgtgtgaggccacactgaggaagagg
ctaagtgagtttgaggacacgcccaccagtgaactgaccattgaagagtttatgagggtg
gatctagaccaggagtgtgacccaccctcctttaaagatggactgaggagggtcagactg
caaaagatcgaggaggagctggcaaagaaaatagacgaggttcaaggtgaaatctgtggc
tatcaggatgaaattgagatggagctggagagcaacaggcccaaagccagtgggatttac
gcagcttattcgaaaaatgatgatgcagtgtccttgatgtcgtccatctgcaccgacatt
gatgaggagtgtgatgatgaagagttgcgggctgttgcgtctcacctgaacaacagctcc
tgcagcaacgggaagccaacgggcgaagaagacgaggaacgacaggatgggcgagacaca
ccgctcaagcgcccctctctagaggtcctgttggggccgctgcccactgcggccagcctg
ggcctctctgaatccatcaacaagtgtgttggagaggagaaggagaatgaacatgatgat
gcatcagtaaatggtgaactggatctgagcgggatcgatgatgaggaaattgatcggtac
atcctgaacgacaaggaggtgcagattaaaaccgagctgtggttgctggagaatgcagac
tacctcaaagaacagaaagaaaaggaggaaaggatagctaaggagaaggagcttggtatc
tacaaggaaaagaagtcgcggaaaccaccgcagaaacggcagccgatcaacgccagcacg
gcggacgaggcgattgagaagatgctggagcagaagcgcatctcctctaaaatcaactat
gacgtcctgaaggacctgaacaagtctgccccgaagagcccctccaccgagcccaaagag
tctccggcacagggaaacacccggagaccccccgctcgcccacgcaaacccgccgacccc
ttagccggcctgcccttgcctgcaagcaccatcggaaagaggatacgaccactcatttct
gcacaaccctctaagaaacaggccctggatcagtcagtgttggggaccccagtgtcagtg
cctgcagcccctgcccagaatgccgtgctggtggagagtgggccggtggcgtatgaggat
gtaggggatgaagacgaggaggaagaggaggagccttgtgttagtgctatgcagatgatg
ggtggcaacgactacggctacgactttgatgacgatgacgggttctag
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