Astyanax mexicanus (Mexican tetra): 103041049
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Entry
103041049 CDS
T05042
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
amex04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103041049
04082 Neuroactive ligand signaling
103041049
04519 Cadherin signaling
103041049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103041049
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103041049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
103041049
NCBI-ProteinID:
XP_022540348
Ensembl:
ENSAMXG00000041339
UniProt:
A0A3B1K4P0
LinkDB
All DBs
Position
7
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AA seq
464 aa
AA seq
DB search
MMTLIPSWFTLFVFILFNRIFENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNVNDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLHHPDCNNALMYGGHHMDCEDDMNGIVTTI
ASNSSRSKRRKDTPTPAPATTPTGEPPTGAVPCSPPTPEDKPAETLTEPLNRCIKTLSLI
RRILRSVNCCHIKNPHYIDNYSRVTFPLSFVLVNLLYWTYYLYF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgactctaatcccctcctggttcacgctgtttgttttcatccttttcaacaggatc
tttgagaactcgctactgagcgctgaggtgaaggaaggagagattctgcctcccaccatc
cagaagctgatgaaaggatacaacaagtacctcaggcctttctttgacaatgggccggtc
actgtggggatgagtttggatattgccagcattgacactatatcagagatcaacatggac
tacacagccaccatatttctccggcagcgctggacagacgagaggctcgtgtttgaaggc
aataagagcttgagtctggatgggcgtctggtggagctgttgtgggttccagataccttc
attgtggactctaagaagtccttccttcatgacatcactgtggagaaccgactgattaga
atcttccccaatggaactgtgctttacgctttacggatcaccacaacagtggcctgcaac
atggatttgactaaataccccatggataagcagacatgcaccctacaactggaaagctgg
ggatataacgtcaatgatgtgatgttttactggaccagaggaaatgaatctgtcagtggg
ttggatactctgcgtctggctcagtacactgtagaggatcattacacttcggtttcagag
gcagtgtatgagacaggtaactacccgaaactcgtcttccacttcgagctgaagagaagc
atcctgtacttcatcctggaaacctatgtgccctccagtctgcttgtggtcctgtcttgg
gtgtccttctggatcagccagtcatcagtgccagctcgcatatgtataggagtgaccaca
gtcttaacaatgaccacgctgatgatgggagcaaggacatctctacccaatgccaactgc
ttcatcaaggccatcgatgtgtatctgggaatttgtttcagtttcatcttcggggcattg
atagagtacgctgtggctcacttctgcacactccaccacccagactgcaacaatgcactt
atgtatggtggacaccacatggactgcgaagatgatatgaatgggattgtaacgacaatt
gccagcaattccagccgatctaagcggcgcaaggatactccaaccccggctcctgccacg
acccctactggagagccccctactggagccgtaccctgcagccctcccaccccggaggat
aagcctgcagagaccctgacggagcccctgaaccgctgtatcaaaactctgtccctcata
agacgaatactgcgctctgtgaactgctgtcatataaagaatccacattatatagacaat
tattctcgcgttacgtttccactctccttcgtcttagtgaacctgctctactggacttac
tacttgtacttctaa
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