Astyanax mexicanus (Mexican tetra): 103041078
Help
Entry
103041078 CDS
T05042
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4 isoform X1
KO
K04865
voltage-dependent calcium channel beta-4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04260
Cardiac muscle contraction
amex04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103041078
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
103041078
04261 Adrenergic signaling in cardiomyocytes
103041078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103041078
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103041078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
103041078
NCBI-ProteinID:
XP_007234621
Ensembl:
ENSAMXG00000001858
UniProt:
A0A8B9HIJ4
LinkDB
All DBs
Position
13:complement(18232082..18282278)
Genome browser
AA seq
520 aa
AA seq
DB search
MSRHIYIRNKIGEGIQAPIFQVNRGTYSRRSRLKRSDGSTTSTSFILRQGSADSYTSRPS
DSDVSLEEERQEGGSQGRQEREQQAAVQLERAKAKAVAFAVKTNVSYCGALDEDVPVPGT
AISFDAKDFLHIKEKFNNDWWIGRLVKEGCEIGFIPSPLKLENIRAQLEQKKSRVQGKSS
GSSSSSLGDVMSSGKQKQKVTEHVTPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFL
KHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELARSL
QLVVLDADTINHPAQLMKTSLAPIIVHVKVSSPKVLQRLIKSRGKSQSKHLNVQLVAADK
LAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHTSSSTPLNPLLGRNLGPAALAPY
PSTISALQNQQGQRTRHANHTGDHSTPNERRNLMASDENYHNERAHKGRNRGSSGSQHGG
GGGRDHHYMDEQQDPYQDSYKPHRNRSSPGSYSQDSRHRL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacacatttacatcagaaacaagatcggagaggggatccaggcgcccatattc
caggtaaacagagggacatactcaagacggagccgactgaagcgctcagatggcagcacc
acttccaccagctttatcctcagacagggttcagctgattcctacactagcaggccatca
gactcggatgtgtcgttggaggaggagaggcaggagggtgggagccagggccggcaggag
cgagagcagcaggccgctgtgcagctggaaagggccaaggccaaagcggtggcctttgct
gtgaagacgaatgtaagttactgtggagcgctggatgaggatgtgcctgtgccaggaaca
gccatctcatttgatgctaaggactttctgcatatcaaagagaagttcaataatgactgg
tggattgggcgactggtgaaagagggctgtgagattggattcatccccagccctctgaag
ctggagaacatcagagcccagctagagcagaagaaaagccgtgttcaaggtaagtccagc
ggaagctcctcctccagcttgggggatgtaatgtcatcaggcaagcagaaacaaaaagtg
acggaacacgttacaccctatgatgtcgtgccctccatgaggcctgtggtcctggttggc
ccatctctaaaaggatatgaggtaaccgatatgatgcaaaaggctctttttgacttcctg
aaacacagatttgatggcaggatatccatcacacgtgtgactgcagatatctccctggcc
aagagatctgtgctgaacaaccccagcaaaagagccatcatagaacgctctaacacaaga
tccagtcttgctgaagtgcagagtgagattgagcgtatctttgaactggcccgctcactg
caactggtagtgctggatgcagacaccattaaccaccctgctcagctgatgaaaacatca
ctagctcccatcattgtccatgtcaaagtgtcctcgccaaaggtcctccagaggctgata
aaatccagaggaaaatctcagagtaaacatctcaatgtgcagcttgtagcagccgataaa
ctggcacagtgcccgccggagatgtttgacatcattctggacgagaatcagttggaggac
gcgtgtgaacacctggcggagtacctggaggcatactggaaagccactcacacctccagc
agcaccccgctaaacccactgctgggccggaacctcggccctgccgctcttgccccctac
ccatccactatctccgctctgcagaatcagcagggccagagaacacgacacgccaaccac
acaggtgaccactctacgcccaacgagcgacgcaacctgatggcctcagatgagaactac
cacaacgaacgggcacacaagggccgcaaccgcggttcatccggctcacaacacggaggc
ggtggtggtcgagatcatcactacatggacgagcaacaggacccctatcaggacagctac
aagcctcaccgcaaccgtagctccccgggcagctacagccaggactcccgccaccggctc
tga
DBGET
integrated database retrieval system
