Astyanax mexicanus (Mexican tetra): 103041190
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Entry
103041190 CDS
T05042
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103041190 (ddx4)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103041190 (ddx4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103041190 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
103041190
NCBI-ProteinID:
XP_022536980
Ensembl:
ENSAMXG00000010288
UniProt:
A0A8B9LNF2
W5KSP0
LinkDB
All DBs
Position
20:complement(27277225..27285155)
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AA seq
676 aa
AA seq
DB search
MDDWEEEEKGPVVNNSSFGNSGSSWKSGGQQNGFKSNDTEGSSWKKGSGEFGLRGGTRGR
GSRGRGGGFGSFSSETDENGNNEDDGGKSWNSGGGESGGFRGRGGRGRGSRGRGGFRNFN
SSEADENGNDEGFKSSFGGRGGRGGREGRGGFGRGGGGQGGGGYRGGDEEVFSKGSVTGE
EGGAEVSAGPKVVYVPPPPPEEESSIFAHYETGINFDKYDDILVDVSGSNPPKAIMTFEE
AGLCETLSRNVAKSGYVKPTPVQKYGIPIISAKRDLMACAQTGSGKTAAFLLPILQQLMA
DGVAASKFSEVQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREV
LKGCNVLCGTPGRLLDIIGRGKVGLSKLRYLVLDEADRMLDMGFEPDMRKLVSSPGMPAK
EERQTLMFSATYPEDIQRLAADFLKVDYLFLAVGVVGGACSDVEQHIIQVDQYSKREQLL
ELLKTTGTERTMVFVETKRSADFIATFLCQEKVPTTSIHGDREQREREKALSDFRTGQCP
VLVATSVAARGLDIEHVQHVVNFDLPNNIEEYVHRIGRTGRCGNTGRAVSFFYPESDTPL
ARSLVKVLTGAQQEVPPWLEEIAFSAHGTTGFNPRGKVFASTDTRKGGSFQKNQAAAPPP
AAQSTGAAADDDEEWE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgactgggaggaagaagaaaaggggcctgttgtgaacaactcaagttttggaaat
tcagggagctcatggaagagtggaggtcagcagaacggcttcaaaagcaatgacacagag
ggaagctcttggaaaaagggcagtggtgaatttgggctccgaggtggtacaagaggtcgt
ggctctagaggccgtggtggagggttcggtagcttcagttcagaaacggatgaaaatggc
aacaatgaagacgatggaggcaaatcctggaacagtggtggtggggagagtggtggattc
aggggaagaggtggcagagggcgaggatcgagaggcaggggaggattcaggaattttaac
agctctgaggctgatgaaaatggcaatgatgaaggtttcaaaagtagttttggaggcaga
ggaggtcgcgggggcagagagggtcgtggaggttttggacgaggtggtggaggacaagga
ggtggaggttacaggggaggtgatgaggaggtgttttccaagggctcagtgactggggaa
gaaggtggtgctgaagtcagtgcaggacctaaagtggtttatgtacctcctcctccacca
gaggaggagagctctatatttgcccactatgagactggcataaattttgacaagtatgat
gacattcttgtggatgtgagtgggagcaatcctccgaaggccatcatgacatttgaggaa
gcaggcctttgtgagacactaagcagaaatgttgcgaagtcaggatatgtaaagcccact
cctgttcaaaaatatggcattcccataatatcggccaaacgagatctcatggcttgtgct
cagactggatcagggaagacggctgccttcttgcttcccattcttcagcagctgatggct
gatggtgtggctgccagcaagttcagtgaggtgcaggaacctgaggcaatcattgtggcc
cccaccagagaactcatcaatcagatatatttggaggcccgcaagtttgcatatgggacc
tgtgtgcgtcctgtcgtggtttatggaggtataaacactggatacacaatacgagaggtg
ttgaagggttgcaatgtgttgtgtgggacccctggaagattgctggacattattggtcgt
ggaaaggttggactaagtaaacttcgttatttggtgctggatgaggctgaccgcatgctt
gatatgggctttgagccagacatgcgaaaactggtgagctctccaggcatgcctgctaag
gaagaaaggcaaaccctcatgttcagtgccacctatccagaggatattcagaggctggca
gcagacttcctaaaggtggattatttgtttcttgctgtgggtgtggtgggaggagcgtgc
agtgatgtggaacagcatatcattcaggtggatcagtactccaagagggaacagctactg
gaattgctaaagaccacaggaactgagcgaacaatggtttttgtcgaaaccaaaagaagt
gcagatttcattgcaacatttctttgccaagagaaggttccaactacaagcattcatgga
gaccgggaacagcgagagcgtgagaaagctctcagtgacttccgcacaggccagtgccct
gtgcttgttgctacatctgttgctgctagaggcctggacattgagcatgtccagcatgta
gtaaactttgacctgcctaataacattgaggagtatgttcaccgcattggaagaacaggc
cgctgtggaaacactgggagagcggtttccttcttttacccagagtctgatactccactg
gcacggtctctggtgaaagttctcacaggggcccagcaggaagtcccaccatggctggag
gaaattgcgtttagtgcccatggcacaacaggatttaacccacgtggtaaagtgtttgct
tctacagacactcgcaagggtggctccttccagaaaaaccaggcagcagcaccaccacca
gctgctcagagcaccggtgcagcagcagatgatgatgaagaatgggagtag
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