Astyanax mexicanus (Mexican tetra): 103041236
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Entry
103041236 CDS
T05042
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103041236 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103041236 (slc6a5)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103041236 (slc6a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103041236
NCBI-ProteinID:
XP_049329193
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MNGEQDQLLAEGSEQREMQQQDGETGGNSFCLAEGKNFCPTEDKNFCPAEDKNSCLAEQG
RARAEEAEGGYGTFTSARGDEEDDGGDENKARGNWSNKMDFILSMVGYAVGLGNVWRFPY
LAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIAMLII
SVLIAIYYNIIMCWTLYYLFASFTSLKDFLPWTFCNNVWNTVECKDQHMLRLDSCIIRDR
NVSSVKNTTFCLSANAAGNLSRLLNITTENRTYVSPSEEYFKYNVLHISKGIEYPGDIRW
PLAACLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFI
TPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVTCTNSATSI
FAGFVIFSVIGFMAHELKVPIESVADEGPGIAFVVYPEALTRLPVSPFWAIIFFLMLLTL
GLDTMFATIETIVTSVSDEFPKYLRKHKPIFTLVCCLSFYVLGFPMITESGMYMLQLVDT
YAASYSLVIIAIFELIGVSYIYGLQRFCEDIEMMIGFQPNKFWRICWAFVTPTILTFILA
LSLYQWQVMTYEDYTYPTWSMVMGWLMVICSVIWIPIMFVIKMYLAPGTLIERLKLVCSP
QPDWGPFLMKHRGERYKNMMDPLGTNSLGLKLPPKEFHLSAQYQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagagcaggatcagctgttagcggagggaagtgagcaaagggagatgcagcag
caagacggagagacgggcggtaacagcttctgcctcgcagagggtaaaaacttttgtcct
actgaggataaaaatttctgccccgcggaggacaagaattcatgtctcgcggagcagggc
agagcgcgcgctgaggaggcggaggggggctacggcactttcaccagcgcacggggggat
gaggaagatgatgggggtgatgagaataaagcgcgcgggaactggtccaataagatggat
ttcattctgtccatggtgggctacgcggtgggcttggggaacgtgtggaggttcccctac
ctggcatttcagaacggaggaggtgcgtttttaatcccgtacctgattatgttgggtctg
gctggaatccccatcttcctgctggaagtgtctttgggacagtttgccagtcagggtcct
gtctccgtctggaaagccattcctgccctgcaaggttgcgggattgccatgttgattata
tctgtgttgatagccatatactataatataatcatgtgctggacactgtactacctgttc
gcttcgttcacttcgttgaaggattttctgccctggaccttttgcaacaatgtctggaac
acagttgaatgcaaagaccagcacatgctgagactggattcttgtataattcgagataga
aacgtcagctcagttaaaaacaccacgttttgtttgtccgcaaacgccgctgggaatttg
agcaggttattaaacatcacaacagagaacaggacctacgtcagccccagtgaggagtac
ttcaaatataatgtattacacatctctaaagggattgaataccctggggatatccgctgg
cccctggctgcatgcctctttttggcctggctgatagtctacgcgtctttggcgaaaggg
atcaaatcttcaggcaaggtagtgtattttacagccactttcccatatgtggtgttggtc
atcctgttaatccgcggggtcactctgcctggggccggctctgggatcctgtacttcatt
acaccgaagtgggagaaactcaacgatgctaaagtgtggaaagatgctgcaactcagatt
ttcttctcactgtctgcagcgtggggcggtctgataacgctttcctcatataataaattc
cataataactgttacagggacaccatcattgtgacgtgtaccaacagtgccaccagcatt
tttgctgggtttgttattttttcagtcattggcttcatggcccacgaactgaaggtgcca
attgagagtgtagcagatgaagggcctggtatagcatttgttgtttaccctgaagccctc
acgagattgccagtctctccattttgggccatcatctttttcctcatgctcctcacactg
gggctggatactatgtttgccaccattgaaaccatagtgacctctgtgtcagatgaattc
cctaaatacctgcgcaaacacaagcctatcttcaccctggtgtgctgtttatccttctac
gtgttgggattccctatgatcaccgagagtgggatgtatatgcttcagctggtggacact
tatgcagcgtcctattctctggtcatcattgcaatatttgaactaattggagtctcgtat
atctacggtctgcagcggttttgtgaggacattgaaatgatgattggttttcagccaaac
aagttctggaggatatgctgggcctttgtcactcctaccatcctcacatttatcctggca
ctgagtctgtaccagtggcaggttatgacctatgaggattacacctatcccacctggtcg
atggtaatgggttggttaatggtcatctgctccgtcatctggatccccatcatgtttgtt
atcaaaatgtacctggcgccaggaactctgattgagcgcctgaagctggtttgctcacca
cagcctgactggggcccattcctgatgaagcatcgcggagaacgctacaagaacatgatg
gacccgctgggcacaaactcactgggactcaaactaccacccaaagagttccatctttcc
gcccagtaccagtaa
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