Astyanax mexicanus (Mexican tetra): 103041254 Help Entry 103041254         CDS       T05042                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03440   Homologous recombination amex03450   Non-homologous end-joining amex04218   Cellular senescence Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     103041254 (rad50)    03450 Non-homologous end-joining     103041254 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     103041254 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:amex03032]     103041254 (rad50)    03400 DNA repair and recombination proteins [BR:amex03400]     103041254 (rad50) DNA replication proteins [BR:amex03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     103041254 (rad50) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      103041254 (rad50)     BRCA1-C complex      103041254 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      103041254 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ATG17_like ABC_tran AAA_29 AAA_13 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  103041254 NCBI-ProteinID:  XP_022531935 Ensembl:  ENSAMXG00000019920 LinkDB All DBs Position 14:13822510..13869740 Genome browser AA seq 1313 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYVTSGDFPPG SKGNTFVHDPKDAHETDVRAQIRLQFRDVNGQAVAVQRSMQSTQKGKKAPEFKTLEGVIT RMKHGEKVSLSSKCAEIDREMISALGVSKAVLNHVIFCHQEESNWPLSEGKALKQKFDEI FSATRYIKVLETLRQLRLKQSNTVKSCQMELKYLKQNKEKAQEIKDLLSTKEGQLAASKE SVQRIESQIDPLENRLNDIDDNLGKVMKLDNDIKALDSRKKQMEDDNRELEEKMEQVFQG SDEQLQEMYQNHQRTVKEKERRLTECQRELERAGRECQRMNRIKADLLVEQGRLQMEADR HALHIKNRDAQVKSLAAYLEMEGYERTPFSERQLQSFHRQTKERQDQETEALNKIMTDMQ EKETQKQQSIDEIRDKKTGLERTIELKGDIQAKKQQELKNIKSDLQRLEGSSTRLQELET ELSKAERELDNAVQSSTVDSLKAEVQELQREKAELDQAQRRLDQEMEALNMHTTARTQMD MLKKDKTDKEDQVRKIKSRHNDDLVSVMGHFPNKRELEDWIYSKSREINSLREKLGKLNK ELASREQNKSHFTAEIRRKEQQLASYEEKLFNVCGSQDFESDLSKLQDDLDKCSKQRAML AGATAVYTQFISQLTEEGEPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKNTEQDL KRKERKRDDMMALKPVRQSLAELQEKELPELRNKLQTVNREIEKLKGDIEEQESVLSMLM SEEDTAKACLQDISLMDRYQLDLKDVERKIAQHAAKLQGVDLNRTMQNVSQEKQESQHRL DTTCSKMELKRKLIQDQQEQIQTLKSSVNEIRSEKLQISSNMQKQQQLEEQCVELSTEIQ ALHREIREAKEQVSPLATTFEKLQQEKQELIERRRQKQVEGQEKITAIKDRIKSLSSLER EITRYIEEGKNDYKEQKEAELQETNTQLIEAEKQREKINKDIGDIRQDIDTQKVQERWLQ DNLTLRKRVEELKEVSKKREVLLKEMGNMKVIELRSERRELERKVEDLKKNRSVALGRQK GFEEEILRFRKELREDQYCQAEDRFRDRMIVMRTTELANKDLDIYYKALDQTIMKFHSMK MEEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRTYNYRVVMVKGDTALDMRG RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQ RNFQLLIITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEITKCNISSLNTYLH NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtcaaaaatagagaaaatgagcatcctcggagtgaggagcttcggcgtagaggacaag gacaaacaagtgatctcatttttcagtcctctgacagtgctggtcggtccgaacggagct ggcaaaacgactatcatcgagtgcctgaagtatgtcacttctggagatttcccccctgga agcaaagggaatacatttgttcatgatccaaaggatgcccatgagacagatgtgcgtgcc cagattcgtctgcagttcagagatgtaaacggccaggctgtagctgttcagcgatccatg cagagcacacagaagggcaaaaaggcacccgagtttaaaacccttgaaggagtcatcacc agaatgaagcatggcgagaaggtcagtctgagttctaaatgtgcagagatcgaccgtgag atgatctcagctctgggtgtttccaaagctgtcctcaaccatgtcatcttctgccaccaa gaggagtccaactggcctctcagtgaaggaaaagcactcaaacagaaatttgatgagatt ttctctgccacaaggtacatcaaggtgctagaaaccctgcggcagttgaggctgaagcag tccaacactgtcaagtcctgtcagatggaactgaagtatctgaagcagaacaaggagaaa gctcaggagataaaggatctactgtctactaaagaaggccagctagcagcttctaaagag agcgtgcagcgcatcgaaagccagatcgacccactggagaatcgactgaatgacattgat gataaccttggcaaagttatgaaactggataatgacatcaaggctctggacagcaggaag aaacagatggaagatgataatcgtgagttagaagagaagatggaacaggtgttccagggt tcagatgagcagctgcaggagatgtaccagaaccaccagcgtacagtgaaggagaaagag aggaggcttacagaatgtcagcgtgaactggagagagcaggtcgcgagtgccagaggatg aaccgcatcaaggcagacctgcttgttgaacaaggtcgtctccagatggaagcagacagg cacgcattacacataaagaacagggatgctcaggtcaagtctctggctgcgtatctggaa atggagggctatgagaggacccccttcagtgagagacaactccagagcttccatagacag accaaggagagacaggaccaggaaaccgaggccctcaataagattatgactgacatgcaa gaaaaagagacccagaaacaacagagcatcgatgaaatccgtgataagaagactggcctg gagagaaccatcgagctgaagggagatatacaggccaagaagcagcaggagctcaagaac attaaatctgacctgcagagactggagggctcttccaccagactccaggagctggaaact gaactttcaaaagcggagcgagagctggataacgctgtgcagagctctacagtggacagt ctgaaggcagaggtgcaggagctacagagagagaaagcagagctggaccaggcccaacgc agactggaccaggagatggaggctctgaacatgcacaccacagcacgcacacagatggac atgctgaagaaggataaaacggataaagaagatcaagtgaggaagattaagtccaggcac aacgatgacctggtgtctgtgatgggtcatttccctaacaagagggagctggaggactgg atctacagcaaatccagagagatcaattctctccgagagaaactaggaaagctcaacaaa gagctggcatccagagagcagaacaagagtcacttcactgctgagatccgacgcaaagag cagcagctggccagctatgaggagaagctcttcaatgtgtgtggcagtcaggactttgaa tcagacctgagcaagctgcaggatgacctggacaagtgctctaagcagagagctatgctg gcgggtgctacagctgtgtacacccagttcatcagtcagctgactgaggagggtgagccc tgctgcccggtgtgccagcgcatctttccctctgaggcggagctccaggacgtcattaac gacatgcagtccaaactgcgcctggttccggacaaactgaagaacacagagcaggacctg aagaggaaagagcgcaaacgggatgacatgatggctctcaaacctgtcaggcagtcttta gcggagctgcaggagaaggagctgcctgagctgaggaataagctgcagactgtgaatcgt gagatagagaaattgaagggggacatcgaggaacaggagagtgtactgtccatgctgatg tctgaggaggacacggccaaggcctgcctgcaggacatttctctcatggaccgctaccag ctagacctaaaagacgtggagagaaagatagcccagcacgctgccaagcttcagggagtg gatctaaaccggacaatgcagaacgtcagccaagagaagcaggagtcccagcatcgttta gacaccacctgcagtaagatggagcttaagcgcaaacttatccaggaccagcaggagcag atccagactctgaagagcagtgtgaacgaaatccgttcagagaagctccaaatctccagt aacatgcagaagcagcagcagctggaagagcagtgtgtggagttaagcactgagattcag gctctgcacagagaaatacgggaagcgaaagagcaggtgtctccactggcgaccactttt gaaaagcttcagcaggagaagcaggagctgattgagaggagacgacagaagcaagtggaa ggtcaggaaaagatcactgccatcaaggacaggattaagagtttgtcgagtcttgaaaga gaaattaccaggtatattgaagagggaaaaaatgactacaaagagcaaaaagaagctgaa ctgcaagagacaaatacccagctgattgaagcagagaaacagcgagagaagatcaacaaa gacattggcgatatcagacaagatatagacactcaaaaggtccaagagcgttggctacag gataacctgaccctgagaaagcgtgtggaggagctgaaggaagtgtccaagaaaagggag gtcctactcaaggagatgggcaacatgaaggtcatagagttacgcagtgagcgccgggag ttggagcggaaggtggaggatttgaagaagaaccgcagtgtggctttaggccgtcagaag ggcttcgaagaagagatcctccgtttccgaaaggagctgcgtgaggaccagtactgtcag gctgaggacagattccgggacagaatgatcgtcatgagaaccactgagctggccaacaaa gacttggacatctactacaaggcactggaccaaacaatcatgaagtttcacagtatgaag atggaagagattaacaaaatcatccgggacctgtggaggagcacataccgtggacaagat attgagtatgtggagatcaggtctgacgtggatgagaatgcctccgctggcgtaaagaga agaacctacaattacagagtcgtgatggtcaaaggagacacagctttagacatgagagga cgctgcagtgccgggcaaaaggtgttagcctccctcatcatccgattggctttggctgag acattctgtctgaattgcggcattttagcactggacgagcccaccaccaatctggacaga gaaaacattgagtccctagcccacgccttggtggaaatcataaagagtcgctctcggcag cgcaacttccagctgctcatcatcacccacgatgaggactttgtggagctcctgggccgc tccaactatgtggagcacttctacaggatcaggaagaaccaggaccagtgttctgagatt accaagtgcaacatttcaagtttaaacacttacctgcactga

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