Astyanax mexicanus (Mexican tetra): 103041318
Help
Entry
103041318 CDS
T05042
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X2
KO
K16175
protein scribble
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103041318 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
103041318
NCBI-ProteinID:
XP_022533770
Ensembl:
ENSAMXG00000018369
LinkDB
All DBs
Position
8:complement(39548658..39685803)
Genome browser
AA seq
2053 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHSVPDEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPAEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNQLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLTELPSEIS
GLIALTDLLLSQNHLDVVPDSIGSLKQLSIFKVDQNRLVHLTDSIGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRVSSVPAELGGCASLNVLSLRDNRVGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
TPSLENLLQSSVDESWPTDTNLNRVSVIQFQEEAKPEEEDEESAERRQGLQRRATPHPSE
LKVMKNVIEARRNEAYTSKPDDDLDSPDREEKRLSNLSNQSHDSQASNSTASANSHEEKR
AVNFIGVELNDKHEQEEEELDEMEVEYIEPTVHFAEEPIIRGGDDEDEEDDDEDEDGANR
SDEDSRPPQFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSADGLSPSAHTPE
DQRDEDEDEEEDEDVVTVNTPLLQRLEAAELEDSRLNQVNSSPQPVKGVSFDQVNNLLIE
PARIEEEEHVLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGD
KLLEVNGVDLHGAEHHAAVEALRSSGTAVTMSVLRERMVEPENPITTTPLRPEDDYFPRE
RRSSGLPFLLETGSTSVSAGPCQRLATCLVRNDKGLGFSIAGGKGSTPYRTGDTGIFISR
IAEGGAAHRDNILHVGDRVITINGVDMTEARHDQAVALLTGTSPTITLLVERDQASVGGS
SPRTRPHSPPPPEPSDSPEQEEAGDEPLGNHLSCPMEDEYPIEEVTLVKTGGPLGLSIVG
GSDHASHPFGVSEPGVFISKVIPNGLACQSGLRVGDRILEVNSTDLRHATHQEAVKALLS
NKQEIRMLVRRDPSPPGMQEIVIYKQPGEKLGISIRGGARGHAGNPFDPTDEGIFISKVS
SSGAAARDGRLNVGMRILEVGNHSLLGMTHTEAVRVLRATGDTLFMLVCDGFDPRNAPGV
EASPGVIANPFAAGIVRKNSMESISSIDRDLSPEEIDIMQKEVEMVRETSQWEREEMEKV
ERMRLEREEATRLLEEETENLSTAPLKLDYKTLAALPTTSLQKVARLCLSSVESCPMETA
LQARQPGSIEHHGFDKAHATLYHVDAPVLPSPCLVTSTAAPTHPPAMQDTAPAPATAQEM
QEEECLVDSQPISFSENPFLIANRKGKGRPAVECLLSGPPTGYGRKGQLQTSLYNKGPSV
EAQRIDSPVREQLYSPSSPLPSLHPPSSSAPLALGRETRFASINFTSNVAVKDNSSTKPG
AIQPISRIRPAMSPASQDGHSSPNPFQHGPSPINSQTTPRAPSPDSFDEFPINIKQAYKA
FAAVPHSLAVLEPPQDIYAQRNNIHPMQPSPEPDLSNEVFVEESEDHGSLTPRPSQSADW
REYRSLAAVPRLSRPSLELKTPPPCGRGSPEQRSFRDRQKYFEIDVKQQTPEKPKPRVSL
VGEDDLKKMKEEEAKRFEQRTQDYLMDEDEEDEEEDLAKQMAAMKAQGKVILDGVEYKVE
PVGSHTSNSPRQCATPPNYSATPPSYCGSSGPSSVDGRVDSQRNSMEDSFRLEQRPNSMT
GLIPVYPGESVAPIRTAKAERRHQERLRMQSPELAVATDKELSPAEKRALEAEKRAMWRA
ARPYGLEEDVRQYEQDLAKRLYQSRVKASLGSSANPPASCSSSSQPRMKSLEQDALKAQM
VIAKSKEGRKRGTLDQLAESPSPAPTPSPTPMDDVSPRVVTSPGRLSLSEKKFDYRQFAA
IPSSKPVYDIQSPGATDDSRFIDDAPTNPASYADAEMPVAPVAATTALEEMALYSNKRKL
RQGRRSLETPVPT
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcggtgcaaccgccacgtcgagtcggtggacaaacgg
cactgctcgctgcactcagtgcccgatgagatctaccgctacagccgtagtctggaggag
ttactgctcgacgccaaccagctgagagaacttcccaagcctttcttcaggctgctaaac
ctgcggaagctgggcctgagtgacaatgagatccagagactgcccgctgaagtggccaac
ttcatgcagctggtggagttggacatctccagaaatgacattcctgaaatcccagagagc
attaagttctgtaaggcgctggagattgcagacttcagtggaaaccccctctccagattg
cctgatggctttacgcagcttagagcactagcccaccttgcactcaatgatgtgtcacta
cagtcactaccaaacgacataggaaacttggctaacctggtaactctggagctgagggag
aatctgctgaagtctttacccacctctctatccttcctggttaaactggaacagctagat
ttgggcagcaatcaactggaagtattgccggacacattgggggccttgcctaaccttcgg
gagctatggctggacaggaaccaactctcttcgctacctccagagctgggaaatcttcga
cggcttgtttgcctggacgtgtcagaaaaccggctcacagagttgccctctgagatcagt
ggcctcattgccctcactgacctgcttctctcacagaaccacctggatgttgtgcctgac
agtatcggctctttgaagcagttgtccattttcaaagtggaccaaaatcgcctggtgcat
ctcactgactcgattggcgagtgtgagaacctcacagaacttatgctgacagagaatctt
ctacagtctctccctcgctccctggggaagctgaagaagttgaccaatctgaatgtggac
cgtaaccgtgtgagcagcgttccagcagagctgggcggctgtgccagtctgaacgtgctc
tcgctcagagataaccgcgtgggcaagctacctgctgagctcgccaatgccactgagctg
catgtactagatgtggcaggaaacaggctacaaaacctgcccttcgcactggctaatcta
aacctaaaggccatgtggctggcggagaaccagtctcagcccatgctgaagttccagacg
gaggacgacgagcgcacaggagagaaggtcctcacctgttatctgctgccccaacaacca
acacccagcttagagaacctgctacagagcagtgtggatgaaagctggcccacagacact
aatctaaacagagtgtcagtcatccagttccaggaggaggccaagccggaggaggaggat
gaggagtctgcagagagaaggcagggtctccagagacgagccacccctcaccccagcgag
ctgaaggtgatgaagaatgtgatcgaggccagacgaaacgaggcctacacgtccaagcca
gatgatgacctggactctccagacagagaggagaagcgattaagtaatctttccaaccag
agccacgactcccaagcctccaacagcactgcctcagccaactctcatgaagagaaacga
gcagtgaactttattggggtggagcttaatgacaaacatgagcaagaggaggaggagctt
gatgagatggaggtggaatatattgagcctactgtgcactttgctgaggaaccgatcatc
cgtggtggtgatgatgaagacgaggaggatgatgacgaagatgaggacggcgcaaaccgg
agcgacgaggattcacggcctcctcagttcccagccgagaaacagcggctcatccgcaaa
gacacaccgcactacaaaaagcacttcaagatcaccaagctgcccaagccagagacagtg
gccgccctgctgcagggcttcagcgcagacggcctgtctccctctgcccacacgcccgag
gaccagagagatgaagatgaggacgaggaagaggacgaggatgtagtaacggtcaacacc
cctctgcttcagagactggaagctgctgagctggaggacagcaggctgaatcaggtgaac
tcttcgcctcagccggtgaagggggtgtcatttgatcaagtcaataatctgctgattgag
cctgctcgaattgaggaggaagagcatgtcctcaccatcctgagacagaccggtggatta
ggcatcagcatagctggagggaaaggatccactccttacaagggtgatgatgagggtatc
ttcatctccagggtgtcggaagaaggcccagcagcacgagctggggtcaaagtgggagac
aaattacttgaggtaaatggggtagatctgcatggagcagagcaccacgcagcagtagag
gcgttgcggagctctggaacggcagtgaccatgagtgtgcttcgtgagcggatggtagaa
cctgagaacccaatcactactacacctctgagaccagaggacgattacttccctcgggaa
agaagatccagcggccttccctttctgctggagactggatccacttctgtcagtgcaggc
ccctgccagcgtctggccacctgcttggtgcgcaatgacaagggcttaggcttcagcatc
gctgggggcaaaggatccacgccatatcggacaggagacacggggatcttcatctctcgt
attgctgagggaggtgctgctcacagagataacatccttcatgttggagaccgggtcata
actatcaatggtgtagacatgacagaagccagacatgaccaggcagtagctctgcttacc
ggcacctcccccaccatcaccctgctggtcgagcgggaccaggcaagtgtaggtggctct
tcgccccgaacgcggccccactcacctcctcctccagagccctctgactcccctgagcaa
gaggaggctggagatgagccgctggggaaccatctcagttgcccgatggaggatgagtac
cccatagaggaagtgacactggtcaaaactggtggccctctagggctaagcattgtgggt
ggcagtgatcatgccagccatccatttggcgtcagtgaaccgggcgtgttcatttcgaag
gtcattcccaatggtttggcctgtcagagtgggctgcgggtgggcgatcggatcctagag
gtcaactccactgacctgcggcacgccacacaccaggaggcggtgaaagctctgctctcc
aacaagcaggaaatccgcatgttagtccgcagagacccttcacccccaggcatgcaggaa
attgttatttacaagcaaccaggagagaagttgggcatcagcatcagaggaggagccaga
gggcatgcaggcaaccccttcgaccccacagatgaaggcatcttcatctccaaggtaagc
tccagtggagctgctgcgcgagacggccgccttaacgtgggcatgagaatcctggaggtg
ggcaaccacagtctcctgggcatgacccatacagaagctgtcagggtcttacgtgctact
ggagatacgttattcatgctggtgtgtgacggcttcgacccaagaaacgcaccaggcgtg
gaggcgtctccaggtgtcatcgctaacccgtttgcagctggtattgtccgaaagaatagc
atggagagcatctcctcaatagacagagacctgagcccagaggagatagacatcatgcag
aaggaagttgagatggtgagggagacgtctcagtgggagcgtgaggagatggagaaagtg
gagcgaatgcgcttggagcgtgaggaggctactcgcctgctggaggaggaaactgagaac
ttgagcactgcacctctgaaactggactacaagacactggcagcccttcccacaaccagt
ctacagaaagttgcacggctctgcctttcctctgttgaatcctgtcccatggagactgct
cttcaggccaggcagcctggctctatagaacaccacggctttgataaagctcatgctacc
ctgtaccatgtagacgctcccgtcctgccctccccctgcctggttacgagcacagcagca
cccacacatcccccagctatgcaggacactgctccagctcctgcaactgcacaggagatg
caagaagaggagtgtctggtggactctcagccaatcagtttcagtgaaaatcccttcctg
atagcgaatcgcaaaggcaaaggccgccctgctgtggagtgcctgctttcagggccaccc
acaggctatggcagaaaggggcagcttcagacctcgttgtataacaagggtccatctgtc
gaggcccaaaggatagacagtcctgtccgagagcaactttactcccccagttctccactg
ccatcccttcatccgccctcatcctcagcccctctggccctgggcagggagacgagattc
gcaagcattaatttcacctccaatgtggctgtcaaggacaattcatcaaccaagcctggt
gccatccagcccatctcccggatacggcctgccatgtctccagccagtcaggatggccac
agtagtcccaaccctttccagcatggcccctcccccatcaactcccagaccactcctcgc
gccccttcccctgattctttcgacgaattccccatcaatatcaagcaggcatataaggcc
ttcgcagctgtgcctcactccctggctgtgctggagcctccgcaggatatatatgctcag
aggaacaatatccacccaatgcaaccatcaccagagcctgatctgagtaatgaggtgttt
gtagaggagagtgaagatcacgggtccctgacccctcgtccctcccagtcggctgactgg
cgtgagtacaggagtctggccgctgtgccacgcctgtctcgcccctctctggagttgaag
actcccccgccatgtggaagaggcagcccagagcagcgttccttcagagaccggcagaag
tactttgagatcgatgtgaagcagcagacccccgaaaagcctaaacctcgcgtttcactc
gttggagaggatgacctgaagaaaatgaaggaggaggaggcaaagcgatttgagcagaga
acacaggactatttaatggatgaggatgaggaggacgaagaggaagatttggctaagcag
atggcagcgatgaaggcccaaggcaaggttatcctggatggagtggaatacaaggtggag
cctgttggcagccacacttctaattcgcccaggcagtgtgccacaccccccaactacagt
gccacgcctcctagctactgtggcagctcaggaccctcctctgtagatggtagagttgat
tcccagcgtaattccatggaggacagctttagactggagcagagacccaactcaatgacc
ggtctgattcctgtctatcccggcgagtctgtggctcccattcgcacagccaaagccgag
cgcaggcaccaggagagactgcgtatgcagagcccggagcttgcggtggctactgacaag
gagctctcacctgcggagaaacgagccctggaggctgagaagagagcaatgtggagagcg
gccaggccttatggtctagaggaggacgttagacagtatgagcaggacctggccaagagg
ctgtaccagtcgcgtgtgaaggcgtcgttaggcagctctgcaaaccctcccgcttcctgc
tcctcttcctctcagcccagaatgaagtctctggagcaggatgctctgaaggctcagatg
gtcattgcaaaatccaaggagggcagaaagcgggggaccctggaccagttagccgaatca
ccctctcctgctcccacgccctcgcccacccctatggatgatgtcagtccgcgggtcgtg
acgtctccgggtcgactgtccctgtcagaaaagaagtttgactaccgacagttcgctgcc
attccttcttccaaacccgtatacgacattcagtctcctggtgccacagacgactctcgc
tttatagatgacgcccccactaacccagcttcctatgcagacgctgagatgccggtagct
ccggtggcggccaccacagctctggaggagatggctctgtacagcaacaagcgcaaactc
cgacaaggtcgacgcagcctggagacgcctgttcccacataa
DBGET
integrated database retrieval system
