Astyanax mexicanus (Mexican tetra): 103041548
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Entry
103041548 CDS
T05042
Symbol
rin1a
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103041548 (rin1a)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103041548 (rin1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
SH2_1
Motif
Other DBs
NCBI-GeneID:
103041548
NCBI-ProteinID:
XP_007244539
Ensembl:
ENSAMXG00000007243
UniProt:
A0A8T2L7A2
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Position
17:complement(16359622..16377587)
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AA seq
824 aa
AA seq
DB search
MQEDPVYDYPDPQSLGERRACPQRGSLKSISVLDRLLLTYPVWLQLSINSATALHILQRE
PPGTFLVRKSSTSQKKMLCVRLADDSVPSFVKQFVIREKDSTFSLESSAISFPDLCRLIA
FYCVSRDVLPFTLELPEAIAKASSHKQLESISHMGVEFWSSQLNYRGPRNGPPPVPDAPL
NPDPTHPHPTPKDNASSASSSTSSTLFQEFCPIHTRSPSELDFGAGQGALCFINPLFLQE
HPVRGAMHKRHHFKRSIKVRVSTENSSSLSPPVSPPPPPPLLAKAKNKGKSAQQTEVVHT
SEEATEKTEAAETDSDYLQPCPALPKKASAKVMPTLSPTAEEDDYQLPKALVQGCKKMER
EEEDEDEEVGLVLERRSAPSLSELDSSSSLSSLDEAEESPERPPLTRGTSNPNIPSPRLP
RQSVSALRKMSAAFVSFFVPGKRVARLVEDLSCDRRMAFGSLVQDFLRDQREALKPQSLT
SAVELLQGLRLFISQAKDFLLECGELEPPIETLVPEDEKDQTLEKALFRCILKPLKAQIS
AALHTLHERDGSSKRMSESMRRARENSPRDLFGVQVSVPDTQGIEKIKQKLSLMKSAYSP
IDKVHLLLQICKLIYKAMKSNTAQEFGADDFLPALSYVIVQCNMPELLLEVEYMMELLET
PWLTGEGGYYLTSVYASLSHIQSEPVAVPTSGLTQQVRESLKEWSRRRNSEARSQKDINL
QQRFVKVLFQEEDCSLVKTLQWKAGVSGEALTQLCAVKFGVDQPEDYGLYWRSDGELMPL
PSDAQFQDLGASSAPLVYQHCSQDMKSRKSLTRVGALDLSAEAS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagaccccgtgtacgactatccagacccccagtcgttgggggagaggagggcg
tgtcctcaaagaggctccttgaagagcatcagtgtgctcgaccgcctgctgctaacgtac
cccgtatggctacagctgtccatcaactcagccacagcccttcacatcctacagcgtgaa
ccgccagggaccttcctggtgcgaaagtccagcacatcccaaaagaaaatgctgtgtgtc
aggctggcagatgacagcgtgccgtcttttgttaagcagtttgttatccgagaaaaggac
tcaaccttctccttggagagctcagctatcagttttccggatctctgcagactcattgcc
ttctactgcgtgagccgggatgttcttcccttcactctggaactaccagaggccatagcc
aaggcttcctctcacaaacagctagaatccatctctcatatgggtgttgagttctggagt
tcgcagttgaactaccgtggtcctcggaatggtcctccaccagtaccagatgcccccctg
aacccagatcctacacatccacatcctactccaaaagacaatgcctcatctgctagttca
agcacaagctcaaccttgttccaggagttctgcccaattcacactcgaagcccctctgag
ctagatttcggggcagggcagggggcgctgtgctttatcaaccccctctttctacaagag
caccctgtccgtggggccatgcacaagcggcatcacttcaaacgcagcattaaggtccgt
gtctccactgaaaactccagctcactctcgccccctgtctctccaccaccacctcctcca
ctgctggcaaaagctaagaataaaggaaagtctgcacagcagactgaagtggttcacacc
agcgaggaagctacagagaagacagaagctgcagagacagattctgactacctacaacct
tgtcctgctctgccaaagaaggcgtctgcaaaggtcatgcccacactctctcctactgca
gaggaagatgactaccagttgcccaaagctcttgtgcagggctgtaagaaaatggagaga
gaagaggaggatgaagacgaggaggtaggcctggtattggaaagaaggtcagctccatct
ctgagtgagctggacagcagcagctccctcagcagcctggatgaggccgaagagagtcct
gagcgtcctcctctcacacgaggcaccagtaatcccaacatcccctcccctcgacttccc
cgtcagtcagtatcagcactacgcaagatgagtgcggcgttcgtgtccttttttgtgccg
gggaagcgggtagcgaggctggtggaagacctttcttgtgacaggcgaatggcattcgga
tctcttgttcaggacttcctgagggaccagagggaggcgctgaagccacagtccctgaca
tcggctgtggagctgctgcaaggcttgcgtctctttatcagccaggctaaagacttccta
ctggagtgtggagaacttgagcccccgattgagaccctagtgccagaagatgagaaagat
cagacactggaaaaggccttattccgctgtatcctaaagcctctaaaagcccagatttct
gcagccctccacaccttgcatgaacgtgacggcagctctaagaggatgtctgagagcatg
cggagagccagagagaactcaccccgtgacctctttggggtgcaagtgtcggttccagac
actcagggcatagagaagatcaagcagaagctgtcgctcatgaaaagtgcttattcaccc
attgacaaagtacatttgctcctgcagatctgtaagctcatctataaagccatgaagagt
aacactgcgcaggaatttggagcagatgacttcctgccagctctttcctatgtgatcgtg
cagtgcaatatgcctgagcttcttctggaagtggagtacatgatggagctgttggaaaca
ccttggcttacaggagaaggtggatactatctgacaagtgtttatgccagcctgagtcat
atccagagtgagccagtggccgtgcccaccagtggacttacccagcaggtcagggaatcg
ctgaaggagtggagccgccgccgtaacagcgaagccaggagccaaaaagacatcaacctg
caacagaggtttgtaaaggtgctgtttcaagaggaggactgtagcttggtgaagaccctg
cagtggaaagcaggggtcagtggagaggctttgacacaactttgtgccgtcaagttcgga
gtggaccagcctgaggactacggtctgtactggagaagcgatggagaactaatgccgctg
ccctccgatgctcagtttcaggacttgggtgccagcagcgctcccctcgtttatcagcac
tgcagtcaggatatgaagtcccgcaagtccctgacaagagtgggtgctttggacctctct
gcagaagcctcataa
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