Astyanax mexicanus (Mexican tetra): 103041687
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Entry
103041687 CDS
T05042
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103041687 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103041687 (slx1b)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103041687 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
103041687
NCBI-ProteinID:
XP_007255803
Ensembl:
ENSAMXG00000007321
UniProt:
A0A8B9KVP4
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Position
8:complement(29963620..29970340)
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AA seq
264 aa
AA seq
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MVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHKGGAKRTSGRGPWEM
VLIVHGFPSDIAALRFEWAWQHPHISRRLSHVTRRSRKESSLQFHWRVVSNMLRVAPWSR
LPLTVRWLRQEYRMDFEPGLQPPLHIPLTFGCVRAKKKKQQQEDKELEESRWERCLLCRD
IVKAEDRLSCFLPLCKMVCHLICLAKHFLKSEPTHLIPVEGECPGCHHSVLWGNLVRHKN
GCYGDLEEIDSYLSQSHWADELQL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggaggtggagagcttctttggggtgtacatgctctactgcacaaacccgaaa
ttcaagggtcgcatctacatcggcttcaccgtcaaccctgagcggagaattggtcagcat
aacgccgggagacacaaagggggagcgaagagaaccagcggcagaggaccatgggagatg
gtcctcatcgttcatggatttccatctgatattgctgctttgaggtttgagtgggcatgg
cagcacccacacatctctcggagactgtcgcatgtgacgcgccgctctcgtaaggagtcc
agcttgcagttccactggcgtgtggtctccaacatgctaagggtggcaccgtggagccgc
ctccctcttacagtacgctggctgaggcaggagtaccgaatggactttgaacctggactg
cagccaccactgcacatccctttaaccttcggctgcgtccgtgctaaaaagaaaaagcag
cagcaggaggacaaggagctagaggagagccggtgggaaagatgtctgctgtgtagggat
attgtgaaggctgaggacaggctgtcgtgcttcctccctctgtgtaaaatggtttgtcat
ctgatttgcctggctaaacattttctgaagtcagagcccactcacctgattcctgtagag
ggggagtgtccaggctgccatcactcggtgctgtggggtaatttggttcgtcacaaaaat
ggctgttatggcgatctagaagaaattgattcatatttgtctcagagtcactgggcagat
gagttgcagctgtaa
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integrated database retrieval system
