Astyanax mexicanus (Mexican tetra): 103041700
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Entry
103041700 CDS
T05042
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103041700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103041700
03036 Chromosome and associated proteins [BR:
amex03036
]
103041700
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103041700
Coactivators
SAGA/TFTC/STAGA complex
103041700
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103041700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
103041700
NCBI-ProteinID:
XP_049319076
LinkDB
All DBs
Position
13:complement(51016493..51043299)
Genome browser
AA seq
978 aa
AA seq
DB search
MAAGSELLDDVFFSAEVDETAVSAVVGSLESQLIGPGVGKLAGRLQTPGGQRRAAAGDNS
AQTRDNNNTGPGQESARPGQESAGAGARVPAGARLQSIGAGTPGHLKQGLGPAPTLNHTP
VSGQRAAPTGAPIGAPTGATLNGSNMVMVVNSHDSAAFSNTSSSPAPVPPTPGAAVNNGP
GCVLKAPPPPSGTVIQTSLMNTSTVISAQTPGLTTRPTVALVRPPMQTQVTVAPPNGAAV
NAVHLPTTITVAQSHRVDSPKALQTVAQAPTTVVQPIRGPIMQTGGRITVPGAVAAGAGA
IRAIAPQVLAPRVPPPQQNQPSVHNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQTQGA
MAQRPTTPTSTPPVHITSVQAPGTPLITRPVAPTTIIKQSSPVPAGVQPTTALQRPPILQ
NTIMLGGTPAPPVGTPSPGQVGVAAAQRVTPAGPTPTGPPPPTAVTPETLENVKKCKNFL
STLIKLASSGKQSSETAANVKELVKNLLEGKLEAEDFTSRLYRELNSSPQPYLVPFLKRS
LPALRQLTPDSVLFIQQSQLPLGPPPTATPPSPALTSAVLAGSTPTTQRSIAPPTATPTA
ATKTTSITSTTSSTLTTPTTSAHQPIASLPQHTHSKPNLVVQQQGALVRGPQVTPMITLR
PGQPRMFTPVVRTQTQTLPSGCMMKTAVSVGSKVLSVPGSQSLPSALQKAKLKDAGGATF
RDDDDINDVASMAGVNLSEESDRILATNSELVGAVTRSCKDEAFLYTGALHSRILQIGKK
FGISELGSDVVSIVSHAAQQRLQNLLEKVTQVAQQRNVPYKEDERHEQVSDVRAQLKFFE
QLDQMEKQRKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTA
LAAIGPRKKRKVDSPASGSGPEGVCSAGSGGLCSVGSGGSRQFSRQRITRVNLRDLLFCL
ENERDTSRSHLLYKAFLK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggagctgctggatgatgtgttttttagcgcggaggtggatgagacg
gcggtgagcgcggtagtcggatctttggagtcccagctcatcggccccggagtcgggaag
ctcgccggcaggctgcagacccccggcgggcagcgcagagccgctgcgggggacaacagc
gcccaaacccgcgataacaacaacacgggacccgggcaggagagcgcgagacccgggcag
gagagcgcgggagcaggagcgagagtgccagctggtgccagactgcagagcattggcgcg
ggtacacctgggcacctcaaacagggactcggaccagctcccacgctcaaccacacgccg
gtcagtgggcagagagctgcgccaaccggtgcgccaatcggtgcgccgacaggtgccacc
ctgaacggcagtaatatggtgatggtggtgaactctcacgactcggcagctttctccaac
acgtcctcctcaccagcgccagtacccccaacccccggcgccgccgtcaacaacggaccc
ggctgcgttctcaaagctccgcccccgccgtccggcaccgtcatccagacctctctgatg
aacacttccactgtgatctcggcgcagacccccggcctgaccacgagacccaccgtggcg
ctggtcaggccgcctatgcaaacccaggtgacggtggcgccgccgaacggagccgcggtg
aacgccgtgcacctgcccaccacgataacggtggcacagagccacagagtggactcgccc
aaagccctacagactgtggctcaggcccctaccacagtggttcagccaatcagaggcccc
ataatgcagactgggggcaggattacagtgccaggagcggtggcggccggcgccggagct
attcgggccatcgctccgcaggttctagccccgagagtcccgcccccccaacagaaccag
cctagcgtccacaatatccagctcccaccaggtatggtcctggtgcgtagtgaaagtggt
cagttgttgatgatccatcagcagacgttggctcagatgcaggctcagactcagggcgcc
atggcccagagacccacaacccccaccagcactccacctgtccacattacctccgtacag
gcccctgggaccccgttaataacgcggccggtggcccccaccactataatcaaacagagc
tctcctgttcctgcaggggttcagcccaccactgcactccagagacccccaatactgcag
aatactataatgttgggaggcacaccggcgccccctgttggcacaccttcaccaggccag
gttggagtggctgcagctcaaagagtgacccctgctggacccacgcctactggtcctcca
cctcccaccgctgtaactccggaaacgttagaaaacgtgaaaaagtgtaagaactttcta
tccacgttgatcaagttggcatccagcggtaaacagtcctcagaaacggcagctaacgtg
aaggagctggttaaaaatctcctggagggaaagctggaagcggaagatttcaccagcagg
ctgtaccgggagctgaactcctcacctcagccctacctcgtgcctttccttaagaggagt
cttccggcgctacgtcagctgactccggattcagtgttgtttatccagcagagtcagctc
ccgctgggcccgccccccacggccacgcccccttcccccgccctcacctccgccgtactg
gcaggatccacccccaccacgcagcgctccatagccccgcccacagcgacccctacagct
gccaccaagaccacctccatcacctcgaccacttcatccaccttaaccacgcccaccacc
tcagctcaccaaccaatcgccagcctgcctcagcacacacacagcaaacccaacctggta
gttcagcagcagggggcgctggtcagagggcctcaggtgacgccgatgatcacactgaga
ccgggtcagcctcgtatgttcacacctgtggtcagaacgcagacgcagacgcttccctca
ggctgtatgatgaagacggcggtctctgtgggcagtaaggtgttgtctgtacccgggtct
cagtctttgccctctgctctccagaaggccaaattaaaagatgcaggcggcgccaccttc
agggatgatgatgatattaacgacgtggcctccatggctggagtgaacctgtctgaggag
agtgatcggatcctggcgacgaactctgagctggtgggggcggtgacccggtcctgtaag
gatgaagcgttcctgtacaccggcgctctgcacagcaggatcctgcagatcggtaagaag
ttcggtatctcggagctgggcagtgacgtggtcagcatcgtctctcacgccgctcagcag
aggctgcagaaccttctggagaaggtgactcaggtggcccagcagaggaacgtcccttat
aaggaggacgagcggcacgagcaggtgagcgacgttcgggctcagctgaagttcttcgag
cagctggatcagatggagaaacagaggaaagaagagcaggagagagagattctgatgaaa
gcagcaaagtcccgatcccgacaagaagacccggagcagctccgcctcaaacagaaagcc
aaagagatgcagcagcaggaattggctcagatgaggcagagggatgcgaatctgacggct
ctggctgcgattggacccagaaagaagcggaaagtggattctccggccagcggatcagga
ccagagggggtgtgttctgctggttctggtgggttgtgctcggtgggttcggggggatcg
cggcagttctcccggcagcgcatcactcgggttaacctcagggatctgctcttctgcctg
gagaacgagcgagacaccagccgatcacacctgctttataaagctttcctcaaataa
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integrated database retrieval system
