Astyanax mexicanus (Mexican tetra): 103041701
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Entry
103041701 CDS
T05042
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X2
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103041701 (smarcad1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103041701 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
HHH_3
CUE
Motif
Other DBs
NCBI-GeneID:
103041701
NCBI-ProteinID:
XP_007257862
Ensembl:
ENSAMXG00000019130
UniProt:
W5LIP7
A0A8T2L0A1
LinkDB
All DBs
Position
20:complement(20015979..20051234)
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AA seq
925 aa
AA seq
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MRNNEEPTDAAVPETPESKRPSGPGAVGSSGAVGVESGSDSDLEISGSSMMVEGPTRSET
KVTPAQEVMLLSEEEDESSEETKQEEEKETSTNKDGVCEREEEEECDGSPERSPSRRCKK
RRESETDDSADEGPEPSWKEQESMVKRLQRKFPNLVKEELRDVLHEHCWIIEDALEALIM
FSDNAAAVESSSDESEASSAPKREIKNPNPSTSVPQPVPALQPPARTVRSTPQPEPHRPL
NGTKETRKRRRPAPESRKQDTSSEDNASDFEESPRGLDSDSDSDQPDETLPRVKGQILNF
FQNATVDELTLIAGCSLKKAQKIVELRPYKTWNDLDEVLHRGNGLSNELLAGCREVLRER
EVVQGLMGKCEDISRRMTEVVQKGQGSMVQPHILNSAFHLKPYQLIGLNWLVLLHQNELS
GILADEMGLGKTIQAISFLAHLYQEGNPGPHLITVPSSTLDNWVRELNLWCPSLKVLVYY
GSIEERRCVRYEILNEMVDYNIIVSTYNLAIGNASDRSLFRKLKLEYAVFDEGHMLKNMS
SLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFAMKSSEE
QSSFERDRIAHAKLIMKPFILRRIKSEVLKQLPAKEEQIEFCPMSEKQQQLYDELFNRLK
NARNEEKRELTNVMMQLRKMANHPLLHRQYYTSQRLAAMSRLMLKEPSHRESDPALIQED
MALMSDFELHRLCQQYTVLIEHQLDMDLLQDSGKLQLLIQILKDLKEKGDRVVLFSQFTM
MLDILEVLLKHHKHRYIRLDGSTPMGDRIVLIDQFNTDQDIFVFLLSTRAGGLGINLTSA
NVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSIEDAMLRIGQRKLKLEQDM
TATEEGDEDNIPDDMASLLKATLGL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaatgaggagcccaccgacgccgcagtgccagaaactccagaatccaagcgt
ccttcagggcccggcgctgtcggatcctccggcgctgtaggggtggaatcgggctcagat
tcggacttggagatatcggggagttctatgatggtggaagggccgacaaggagcgaaacc
aaagtgactccggctcaggaggtgatgttactctcagaggaagaggatgaatcatcagag
gagaccaaacaagaagaggagaaggagacatcgaccaataaagatggagtgtgtgagcgg
gaggaggaggaggagtgtgatgggtctccggagagatccccgtcgcggcgctgtaagaag
aggcgagagtcagagacagatgattctgcagatgagggtcccgagcccagctggaaagag
caggagagcatggtgaagcggctacagcgcaaattccccaacctggtgaaggaggagctc
agggatgttcttcatgaacactgctggatcatagaagatgccctggaggctctgataatg
ttctctgacaacgccgcagcagttgagtccagcagtgacgagtccgaagcatcttcagct
ccaaaacgtgagattaagaatccaaatcccagcacttctgtaccacagccagttccagcg
ctccagcctcccgccagaaccgtcagatctacaccacagcctgaaccacacagacctctc
aacggaaccaaagagacccgcaagaggagacgtccagcgccggagagcaggaagcaggac
accagctctgaggacaatgccagcgactttgaggaatcgccccgaggcttagactcagac
tctgactcggaccagccagacgaaacgctgccgagagtgaagggtcagatactgaacttc
tttcagaacgccacagtggatgagctaacgctaatcgccggctgctccctgaagaaagct
cagaagattgtggaactgagaccgtataaaacgtggaacgatctggacgaagttcttcac
agagggaacggactctcgaatgagctcctcgccggctgtcgggaggtcctgagagaaagg
gaggtggtgcaaggcctgatgggaaagtgcgaggacatttcccggaggatgactgaagtg
gtgcagaagggtcagggctcaatggtccaaccacacatcctcaacagcgcattccatttg
aaaccttatcagctgattggccttaactggctggtcctccttcaccagaacgagctgagt
gggatccttgcagatgagatgggtttggggaaaaccatccaggccatttcgttcctggcc
cacctgtatcaggaggggaaccctggaccacatctcatcacagtaccttcctccactctg
gataattgggttcgggagctgaatctctggtgcccaagcttgaaagtgctggtttattat
gggtctattgaggagcgaagatgtgtccgctacgagattctgaatgaaatggtggactat
aacatcatcgtctcaacgtataatttggccatcgggaacgccagcgaccgcagcctgttt
cgtaagctcaagctggagtacgccgtgtttgacgaaggacacatgttgaagaacatgagc
tcgctgcgctatcgccacctcatggccatcaatgccaagtaccggctgctgctgacagga
acgccactgcagaacaacctgctggagctgatgtctctgctgaacttcatcatgcctaac
atgttctccagcagcacctcccagatcgccaagatgtttgccatgaaatcgtcggaggag
cagagcagttttgagagggaccgaatcgcccacgctaagctcatcatgaagcccttcatc
ctgcggcgaatcaagagcgaggttctgaagcagcttcctgcgaaggaggagcagatcgag
ttctgcccgatgagtgagaaacagcagcagctttacgacgagctcttcaacagactgaag
aacgccaggaatgaggagaaacgggagttgaccaatgtgatgatgcagctgagaaagatg
gccaatcacccgctgctgcaccgccagtactacaccagccagcggctggcggctatgagc
cggctcatgctgaaggagcccagtcaccgcgagtcagacccggcgctgatacaggaggac
atggcgctgatgtcggacttcgagctccatcggctgtgccaacagtacacagttctgata
gagcaccagctggacatggacctgctgcaggactcggggaagctccagcttctcattcag
atactaaaagaccttaaagaaaagggtgacagggtggtcctcttcagccagttcaccatg
atgctggacatcctggaggtgctgctcaaacaccacaaacacagatacattcggctggac
ggctccacgcccatgggtgacagaattgtgctgatcgaccagtttaacacggatcaggac
atcttcgtgttcctgctgtccaccagagccgggggactgggcattaacctgacctctgct
aatgtggtcattcttcatgatatagattgcaacccgtataacgacaagcaggcggaggac
cgctgccaccgcgtcggacagaccagaaccgttaaagtgatcaagctgataagcaaggac
tccatagaggacgccatgctccgcatcggccagaggaagctcaaactggagcaggacatg
acagccacggaggagggcgatgaagacaacattccagacgatatggcctctctgctgaag
gccactttaggcctctga
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