KEGG   Astyanax mexicanus (Mexican tetra): 103041723
Entry
103041723         CDS       T05042                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103041723 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103041723 (taf5l)
   03036 Chromosome and associated proteins [BR:amex03036]
    103041723 (taf5l)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103041723 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     103041723 (taf5l)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103041723 (taf5l)
    STAGA complex
     103041723 (taf5l)
    TFTC complex
     103041723 (taf5l)
    SAGA complex
     103041723 (taf5l)
    SLIK complex
     103041723 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_EML CFAP251_N Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin DSE1_N Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd PAC11 Beta-prop_WDR41 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_VPS8 RMC1_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 ASA1 Tricorn_2nd PEP5_VPS11_N Beta-prop_WDR19_1st WD40_like Beta-prop_IP5PC_F Nbas_N WDR54 PD40
Other DBs
NCBI-GeneID: 103041723
NCBI-ProteinID: XP_007260677
Ensembl: ENSAMXG00000038854
UniProt: A0A8B9K3A7
LinkDB
Position
21
AA seq 603 aa
MKRGRTEQIQYTVTQYLKRRQYVDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYDAQFSKLRTFLLEAEVPWASEVSVVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSLFQQDVEQKAIVELLRGVLTNQDVVSNSKLCALLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICRVLSTHLQVEVTAVRRTDYQLYGAGLNTGNSTSTSSSTWSGVDGAEGAEPVEV
TAGLPQNEAALDALQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSPDSRLLAAGFD
NSAVKLWSLRARKLKAGPHKADVAKIRLACDVLEEEADEEDASGSEIKTLRGHCGPVYRT
AFLTDSSGLLSCSEDSTVRYWDLNSFTNVALYRGHAYPVWDVDVSPCSLYFCTASQDRTA
RLWTFQRTYPLRLYAGHLADVDCVKFHPNSNYIATGSTDKTVRLWSTQQGNSVRLFTGHR
GPVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVMSLSFSPDSALVASA
ALDNSVRVWDIRNAHSGAAAAADGSSGELVGLYTGETSSVLNVQFMACNLLLVTGTALEK
QEQ
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaagcggggccggactgagcagatccagtacacggtgacgcagtacctgaagaggcgt
caatatgtggacacggacggctcactgaaaggagcaaagctctctcagtccgctgaggaa
atggcagccagtctcacagtccagacagagtccagctgtgcgaatgtggtctctgcagca
ccgtgccagtcggaccctcagcagtacgatgctcagttctctaaattacggacctttctg
ctcgaggcggaggtgccgtgggcgagcgaggtgagcgtagtgctgtttcctctcttcctc
tacctgcacctggacatggcgcgctgtggcctgaagggggcagtagattccttctacagc
cgtttccactccctcttccagcaggatgtagagcagaaagccattgttgagcttctgcgt
ggagttctaacaaatcaggacgtggtctccaattctaaactctgcgctctgctggaccac
aagtacgtggttcacctgacggaccaggcctacagttacctgctgcggtatctacagagt
gatgacaacagcgccatctgcagggtgctcagcactcacctacaggtcgaggtgacggct
gtgcgccgaaccgactaccagctctacggggcggggcttaacaccggaaactccacctcc
acttcctccagcacctggtcaggtgtggatggagcagagggggcggagcctgtggaggtc
acggcggggctccctcagaacgaggccgctctggacgctcttcaggactgcattaagcga
gtgagggaaggccccccgtcgttaaccaccgtgtgtttctacgccttccagcacacggag
cagctcctgaacacggccgaggtctcgccagacagtcggctgctcgccgccggcttcgac
aactccgccgttaaactgtggagcctgcgggccaggaagctgaaagcaggaccacacaaa
gccgacgtggccaaaatccgcctggcctgtgacgtgctggaggaggaggcggacgaggag
gacgcctcaggtagtgagataaagacccttcgtggacattgtggccccgtgtaccgcacc
gccttcctgacggacagctccggcctgctgtcctgctccgaggactccacggtgcggtac
tgggacctgaacagcttcacgaatgtggcgctttaccgcggccacgcctaccccgtgtgg
gacgtggacgtgagcccctgcagcctgtacttctgcacggcgtcgcaggaccgcacggcc
cggctctggaccttccagcgcacgtacccactgcgcctttacgccgggcacctggcggac
gtggactgcgtgaaattccaccccaactctaactacatcgccacggggtccacggacaag
acggtgaggctgtggagcactcagcagggcaactccgtcaggttattcaccggacaccga
ggcccggttctgtccctagcgttttctccaaacgggaagtacctggcctcggccggagag
gaccagagggtgaaactgtgggatctggcatccgggactctgtttaaagacctgcgggga
cacacagacagcgtgatgagtctgtccttcagtccggacagcgccctggtggcctcggct
gccctggacaactctgtgcgggtgtgggacatccggaacgctcacagcggggcggcggct
gcggcggacgggtctagcggagaactggtgggattatatacgggagaaactagcagcgta
cttaacgtccagtttatggcgtgtaacctgctgctggtaactggtacagcactggagaaa
caagagcaatga

DBGET integrated database retrieval system