Astyanax mexicanus (Mexican tetra): 103041845
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Entry
103041845 CDS
T05042
Symbol
hif1al2
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like 2 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04140
Autophagy - animal
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103041845 (hif1al2)
04137 Mitophagy - animal
103041845 (hif1al2)
04148 Efferocytosis
103041845 (hif1al2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103041845 (hif1al2)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103041845 (hif1al2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
HIF-1a_CTAD
HIF-1
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
103041845
NCBI-ProteinID:
XP_007244540
Ensembl:
ENSAMXG00000007272
UniProt:
A0A8B9KHT2
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All DBs
Position
17:complement(16337521..16346998)
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AA seq
659 aa
AA seq
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MITKQLETVLKDSLGHKLQLKQKCKQKVGELKKARVCTEWRKARSRVAARNRREKESQLF
REIATLLPLAPNIEAQLDKASVIRLTIAYLHLRAILNTPDPCTASATTPPASAGPGEPAE
VNKKGFFNDALGRFLLILSLNGKIIYTTKDVTFHTGINQMDLIGRSLFDFMHPCDQKELK
ESLTKLIGCQEQQMCELFLRIKSASNNKLTPWKVIHCTGVKKSSSTSGTSCLLLLCRSLP
VQDVIQIGAYLNFKTFLSIHGPDMKFTYCHSGVQEMTGFSDTELYGQSVYQYYHPSDCQH
IHKAHLCLFAKGQVYTGKYRLLQKHGGYVWVETEATVVYNIRTGKPESVVCVNYILSGVE
MADVVFSLEQTDRLMKPCDPLHSKFQPIHPFTTTTQAESTASDKHAESVLRDGAANGQSV
IKQNSAKCNSLTCDICQLDLDSLAPYIPMDEEDFLLTPDSVAVNSDLKRLPSRPCTSLDL
DQRPRLKPVPPTEGVISPALRQTDSTFSPTDGISKGAHAVLVSSRPRHDTQHTVNRNQVE
HSSQTPSFHKKTNHWTGMAKVSQHLTKALGKNSDGLQSYSLPGSVPWDPVFSNPPWYLPE
SHHTTQTRAVKMHPAPTGLPVLSRWECEVNAPLGAPSQLLQGNELTTVLDQVTPAVPWY
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaagcaactagaaacggttctgaaggactctttgggccacaaactccagctg
aagcagaaatgcaaacaaaaagtcggtgagctgaagaaggccagagtgtgcacagaatgg
aggaaggctcggtcgcgtgtggcagctcgaaacaggcgggaaaaggagagccagctcttc
agagaaatagccaccctgctgccgctggctccaaacattgaggctcagttggataaagct
tctgtcatcagacttaccatcgcttacctgcacctcagagctattctcaacactccagac
ccctgcacagcatcagccactacaccgccagcttctgcaggtccaggggaacctgctgaa
gtgaacaagaaggggtttttcaatgatgctctcggacgattcctgctcatattgtccttg
aatgggaagattatctacacaaccaaagatgtcacctttcacacgggaattaaccagatg
gatctgattggccggagtttgtttgatttcatgcacccctgtgaccaaaaggagttgaaa
gagagtcttactaagctgatagggtgccaagagcagcagatgtgtgaactttttctgcga
atcaagagtgcaagcaacaacaagctgactccctggaaggtgattcactgcacaggagtt
aaaaagtcctcctctacttcaggcaccagctgcctgcttctgctctgcaggtcactgcct
gtacaggacgtcatccagatcggggcttatctgaattttaaaacattcctgagcatccat
ggtccagatatgaagttcacctactgtcactctggggtccaggaaatgactggcttcagc
gacacagaattgtacggccagtctgtgtaccagtactatcatccatccgactgccagcat
attcacaaagcacacctctgcttgttcgcgaagggccaggtgtacactgggaaatatcga
ctgctgcagaaacatggcggctacgtttgggtagagacagaggccacagtggtgtacaac
attcgcacggggaagccagaaagtgttgtgtgtgtcaactacattctgagtggggtggag
atggcagatgtggtgttttctttggaacagacagaccggctgatgaaaccatgtgacccc
cttcattctaagttccagcccatccatccattcaccacaaccactcaggcagaatctaca
gcctctgacaagcatgcagagtctgtgctgagagatggtgcagccaatggccagtcagta
atcaagcagaactcagcaaagtgtaactctctcacctgtgatatttgtcagctggatttg
gacagcctggcgccatatatcccaatggacgaggaggatttcctgttaactccagacagt
gtagcagtaaattcagacctaaaaagactcccctctaggccatgcacatcactggatctg
gaccagcgccctcgtttgaagccagttcctcctacagaaggagtcatttcgccggccttg
cgacaaactgacagtactttttctccaacagatgggattagcaaaggtgctcacgctgtg
ctcgtttcatcaagaccaaggcatgacacccagcatacagtgaacagaaatcaagtggag
cacagcagtcaaacaccctcatttcacaagaagacaaatcactggacaggcatggcgaag
gtctcgcaacatctcaccaaagctttaggcaaaaactctgatggtctgcagtcctacagt
cttccaggatcagtaccttgggacccagtattctccaacccaccctggtatcttcctgaa
tcacatcataccacccagactagagcagtaaaaatgcacccagcaccaactggcctgcct
gtactgagcaggtgggagtgtgaagtgaatgcacctctgggagcgccatctcagttgctt
caggggaatgaacttaccactgttctggaccaggtcaccccagcagtaccttggtactaa
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