Astyanax mexicanus (Mexican tetra): 103041848
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Entry
103041848 CDS
T05042
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103041848 (chd7)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103041848 (chd7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
103041848
NCBI-ProteinID:
XP_007245156
UniProt:
A0A8T2L464
LinkDB
All DBs
Position
18:41356444..41425185
Genome browser
AA seq
3184 aa
AA seq
DB search
MADPGMMSLFGDENLFPDGLDSLGDCGFPQGQANPMSQPMTHEHQGYGQLPSSLHLSTPA
VAGQPKLGHHFDHFGQYEQHKMHSMEQQGTRMMGNGPVNGMSSPHSRYHAAPVAHSGGPG
TPGGHHVYPGAQGDGRGQSFPDGGGAWGPQSMQVPEQGRPPFQQQPAQPPSHQHGPAGPQ
GHGHQMAPYMGHSEYNMQGHNQTQTPPRMNHFPQGMPQEANRFMGHVGVPQNPNMAGPAM
RHPTQAPQQHQQPGQQFLHRAAQGNVHPDSVAGHGSPFPQSPSRPQQQPQQQQQQQPSQQ
VMGGRPHQNMGFNMNNQPVSSNTVNSSGQYPPYPPYGNLNQGLANTSGMSPNMSLTTSSN
SNPSGPVAQVQRYPGPGGPQRYPAPGAQQGPMHQQPLHVNQMTAQPMHPAQNQPSTQPKM
QQQHLAPPPQGSYGSPPSMSPMRNMATPAGTPPPQQGRPPSAGLGPEMGGFPGVSHQPQG
AMGHPQRGPTQQHSHPQQLPHPQQHPHPPPTQMYAALSPNHRGAGAQGRPTNHADAQAPL
SQQAPRAGQQLQTSAMPFQQLQQVRTSPNLPTPPAHLAAHHQGSPPPQHGSWVPTHQSPP
PNHQVPHIQHSPSDPSSELTESSKTPASGQNPQPGSCDAQQMESEQKPKKKKKKAKVSED
PEGKHKVNKLDGGGGLGEDGETGLCPTDKSPVEKKSKKRPKEKEAKEPKEPKTPKTPKTP
KTPKEPKEPKEPKEPKEKKAKAATPKPKSAKKPSVKKTDTESSTKKDGKRKRESSVTSDT
EKTPPPSPEEEDDDGIQKRRSSRQVKRKRYTEDLEFRISDEDDDGDDSPGPKSPSTTSEQ
TEVPDAEGPVVEKIMGLRMVKKQLESGDEVEVEEFYVKFKSFSYLHCRWADLEELEKDKR
IHQKIKRFKAKQALNNFLSEMDDEPFNPDYVEVDRVLDVSESTDENGETVTLYLVKWCSL
PYEDSTWELKADIDQSKIEDFERVMAREPETKRVERPPTSDWQKSESSREYKNGNALREY
QLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNW
EREFRTWTELNVVVYHGSQASRRTIQAYEMNYRDAQGRVIKGAYKFHAIITTFEMILTDC
PELRSVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFL
EPDRFPSESTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELT
NVQKKYYRAILEKNFAFLSKSGGGSSGGGGGSSVPNLLNTMMELRKCCNHPYLINGAEEK
IMEEFRETHPPEHPEFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILED
YLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIF
DSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG
RENAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEG
KGSTFAKASFVSSGNRTDISLEDPDFWQKWAKKAELDFDAINGRNTLVIDTPRVRKQTRH
YSSMKEDELMEYSELESDSEDKPVQKPRRPQDKAVGYPRSECFRVEKNLLVYGWGRWRDI
LAHGRFKRPLREQDVEIICRALLAYCLLHYRGDENIKSFIWDLITPTEDGQSRTLSNHSG
LSAPVPRGRKGKKGKLPVSQPHMPQADWLADCNPDVLLQEDSYKRHLKHHCNKVLLRVRM
LYYLRQEVIGDLADRILEGTDSRNELDVWIPQPFHADVPVDWWDLEADKSLLIGVFKHGY
EKYNSMRADPSLCFLERVGMPDAKAIAAEQRGADMVADGGEGEEEDPEYKPLRMPFKDDL
DDFTNSPLDDKEESMDIDGAEVVIPKSGENGKPGKLYWPPASALTARLRRLITAYQRSHK
REQMRQEALSKPDGRRRRRHREEILSMVTEGGPYGQDVAAATAYLAESGPFMKSSPFLPE
SAALLADGAAYFKERRQRWTRREEADFYRVVSTFGVVYDVHRQCFDWSQFRAFARLDKKS
DESLEKYYYAFVAMCKRVCRMQIKGDAADLADPTLIIDPITEERASRTLYRIELLRRIRE
QVLPHPQLEERLRLCQPSQDLPAWWEPGRHDRDLLCGAAKHGVSRTDYHILNDPELGFLE
AHRKFTQGKGAEAAPASNPLTPLALVKEEEMKEEQGDCIEVKPVIETGDDRKEEVKEEKP
VENTEVKPECELKQEEPKEEQKIEALEEVEDKEKDGEMKTETSEMSNGEKATEPELTDAV
PESAPVETPPEQLNAASGAPESDSKANTDKTLEEEEEEKMDEDDKSEKSSQAEAGGSSER
KNFDEESNASLSTARDETRDYFLVDDVEPSPSQVFGDRTMFSFWPKDRVMINRMDNICEA
VMKGKWPSNRRQFFDFPGLLPGYGAMTTDSPLPRRGLGDLSMMSQTSYSGSEDLTMSPQV
NKDEALSLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESHAAEGQAQAMDLTKTL
HGLAPAASSSSSVFPGAGAMASSAALKAQMELLQAGGASRANGSLLEVELPTRRRRGRRK
NVEGLELLFMGNKRGQLSVEDSDGTKAFADGAHVPDRAQRHIPAPAPQASSAALEESSLQ
GEDGTSTKDLREWLRQHPTYTMDMPGYIPKNEELLLSQLGKPKQKRHRCRNPNKIDINTL
TGEERVPVVNKRNGRKMGGAMAPPMKDLPRWLVENPEFAISPDWTDIVKQSGFLPESMFD
RLLTGPVVREEGVRRRGRRPKSEIAKAAAAAQAAAAAASTSGVNPLLMNGLFGGMDLTSL
QSLQSLQSLQLAAGLMGFPPALAGGAADSKHAAAMLPLMLPGMGGLPNMFSLGGLFGGNL
AAATATTANAAAVAAAAAAAAAAPEQAESEEKAQTKKNEESNDAVEDRDDQTTKEEDEKE
VSKDKVDKPAEAESAETNGDATLGAAAAAAAAAAAAAAGMSTNALAFNPFLLSTMAPGLF
YPSMFLPTGLAGLGIPGFSPAALADLQNAMSGSLGAATEESKESKKEAQNPGRDQNALMT
SAGQVEHVLDDSDSEESQNKTADSSVMDEDLAGPAEELDSLEGGDEDDDDDLDEPGEEDE
DKSD
NT seq
9555 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgatgagcctctttggggatgagaacctattccccgatgggctc
gatagtctgggggactgtggcttcccccaaggccaggcaaatcccatgagccagccgatg
acccatgaacaccagggctatgggcaactcccctcttctctgcacctctcaacacctgct
gttgctgggcagccgaagcttggccaccactttgaccatttcggtcagtatgagcaacac
aagatgcattcaatggagcagcaagggacgcggatgatgggaaacggcccagttaatggc
atgtcatccccgcattcgcggtaccacgctgcccctgttgcccacagcggaggacctgga
actcctggagggcatcatgtctacccaggtgcacaaggagatggaagaggccagtcgttc
ccggacggtggaggtgcctggggccctcagtccatgcaggtacccgaacagggtcgaccc
cctttccagcaacaaccagcgcagccaccttctcatcagcatggccctgcaggaccacag
ggtcacggacaccaaatggcaccctatatggggcatagtgagtacaacatgcagggtcac
aaccagacgcaaactcctccaagaatgaaccacttcccccaaggcatgcctcaggaggca
aaccgtttcatgggtcatgtgggagttccgcagaatcccaacatggcaggacctgccatg
cgccaccccacacaggcaccccagcagcatcagcagccgggtcagcagttcctccacaga
gcggcccaaggcaatgtgcatccagactccgtggccggccacggctcgccgtttcctcag
agtccatctagaccacagcaacagccgcagcagcaacagcagcagcagccatctcagcaa
gtcatgggtggccggccccatcagaacatgggatttaatatgaacaaccagccagtctcc
agcaacactgtaaacagctcagggcagtatcctccctatcctccatacggcaaccttaat
cagggattagccaacacttcagggatgagtcccaacatgagccttaccaccagcagcaac
agcaaccctagtggtcctgtggcccaggtgcagcgctacccgggccctggggggcctcag
cggtaccccgcacctggggcccagcagggaccaatgcaccagcaaccacttcacgtgaac
caaatgactgcccagcctatgcatccagcacagaaccaaccctcgacccagccgaaaatg
cagcagcagcacctcgcccctccgcctcagggatcttacggttctcccccttccatgtcg
cccatgaggaacatggccactcctgcaggcactcctccaccccaacagggacgccctccc
agtgcaggtctggggccagaaatgggtggattccctggcgtttcacaccaaccccagggt
gcgatgggccacccacagaggggacctacccagcagcattcacacccccagcaactccct
catcctcagcagcacccgcaccctcctcctacacaaatgtatgcggccttgtcacccaac
cacaggggcgcgggtgctcaaggtagaccaaccaaccacgcagatgcgcaggccccgctc
tcgcagcaagcgccgcgagccgggcagcagctgcagacgtctgcgatgcctttccagcag
cttcagcaggtgcgaacctctccgaatctacccaccccaccagcgcaccttgcagcgcac
caccagggctccccgccacctcagcatggcagctgggtccctacgcaccagtcacctccg
cctaaccaccaagtgcctcacatacagcattccccatcagacccctcttcagagttgacc
gaatccagcaagacacctgcctcaggccagaaccctcagccaggcagctgtgacgcacaa
cagatggagagcgagcagaagccaaaaaagaagaagaagaaagctaaggtgagcgaggac
ccagaagggaaacacaaggtcaataaactggatggaggaggaggcttgggggaagatgga
gaaactggactgtgccccactgacaagtctcctgtagagaagaagagcaaaaagagacca
aaggagaaggaggccaaggaaccgaaggagcccaagactccaaaaacaccgaaaactccc
aaaacacccaaagaacctaaagaacccaaggaacctaaggagcctaaagagaagaaggcc
aaggctgccactcctaagccgaagagcgccaagaaacctagtgttaagaagaccgacacg
gagagctctactaagaaagatggcaagcgcaagagagagtcctcggtcacctccgacaca
gagaaaactcctcccccatcaccggaggaagaggatgatgatggtatccagaagagacgc
tctagccggcaggtaaagagaaagcgttacactgaagacctggagttcaggatctctgac
gaagacgacgatggggatgattctcctggacccaaatcaccctcgactacttcagaacag
acggaggtgcctgatgctgaaggcccagttgtggagaagattatgggcttgcgtatggtc
aagaaacaactggagtctggagacgaagtggaggttgaggaattttacgtcaaatttaag
agtttctcctacctgcactgccgctgggcggaccttgaagagctagagaaggacaagagg
atccaccagaagatcaaaaggttcaaagccaaacaggcactcaacaacttccttagtgag
atggatgatgaaccttttaatccagactatgtggaagtggacagggttctggatgtgtct
gagagcactgatgaaaatggagagacggtcactctgtacctggtgaagtggtgttctctg
ccctacgaggacagcacgtgggagctgaaggccgacatcgaccagagcaagatagaggac
tttgagcgagtgatggcgcgagagccggagacgaagcgtgtggagcgacctcccaccagc
gactggcagaaatccgagagttccagggagtataaaaacggcaacgcactcagggaatac
cagctggaaggagtcaactggctgctcttcaactggtataacacacgaaactgtatatta
gctgatgaaatgggtctgggaaaaaccatccagtccatcaccttcctctacgagatctac
ctgaagggcattcacggcccgttcctggttattgcacctctctcgaccatacccaactgg
gaacgggagttccggacgtggactgagctcaatgtggtcgtctaccacggcagccaggcc
agccgaaggaccatccaggcatatgagatgaactacagggatgcacagggtcgtgtgata
aagggagcctacaaattccatgccatcatcaccacgttcgagatgatcctcacagactgc
ccagagcttcgtagcgttccctggcgctgtgtgattattgatgaggctcatcgactgaaa
aacagaaactgcaagctgctggagggactcaaaatgatggacatggagcacaaagtcctg
ctgacaggaacaccgctgcaaaacactgtggaggaactcttcagtctgctcaacttcctg
gagccagatcgcttcccctcagagtccacctttatgcaggagtttggagatctcaaaact
gaggaacaggtgcaaaagctgcagggcatcctaaagcccatgatgctgcgacgacttaaa
gaggatgtggagaagaacctggccccgaaagaggaaaccatcattgaggttgagctcacc
aacgtgcagaagaaatactatcgtgccattctggagaaaaacttcgccttcctgtctaag
agcggcggcggcagcagcggagggggcggagggtctagtgtccccaacctgctgaatacc
atgatggagctgagaaagtgctgtaatcacccctacctcatcaacggtgctgaggagaag
ataatggaggagttcagggagacccaccctccagaacacccagaattccacctgcaggcc
atgatccaggctgcaggaaagctggttttgattgacaagctcttgcccaagctgaaagct
ggcggccaccgcgtactcgtcttctctcagatggtgcgctgtctggacatcctggaggac
taccttatccagcgacggtacccatatgagcgtatcgatggcagagtgaggggtaacctc
cggcaggcagctattgaccgcttctctcggcctgattcagaccgttttgtgttcctactg
tgcacccgcgccggaggcctgggcattaacctgactgctgctgatacgtgcatcatcttc
gattctgactggaaccctcagaacgacctgcaggcacaggcgagatgccacaggatcgga
cagagcaaggcggtaaagatctaccgcctcatcaccaggaactcttacgagagggagatg
tttgacaaggccagtctaaagctgggactcgacaaggctgtcctgcagtccatgagcgga
agggagaatgcagccaatggggttcagcagctctcaaagaaggagattgaggacctcctg
cgcaaaggagcgtatggagccctaatggacgaggaggacgagggctctaaattctgcgaa
gaggacattgaccagatcttacagagacgcactcagacaatcaccattgagtctgaggga
aaaggctctacttttgcaaaggcgagtttcgtttcctcagggaataggacagatatttct
ctggaggacccagatttctggcagaaatgggcaaagaaagcagagctggacttcgacgcc
atcaacggcaggaataccctagtgattgacactcctcgtgtcaggaagcagactcgtcac
tacagctcgatgaaggaggatgagctgatggagtactcggagctagagagcgattctgag
gacaagcctgttcagaaaccacggaggccccaggacaaagccgtgggctacccccgaagc
gagtgcttccgagtggagaagaatctattggtctatggctggggccgctggagggacatc
ctggctcacgggcgcttcaagcgtcctctgcgagagcaggacgtggagattatctgccga
gcactcctggcctactgcctgctgcattaccggggggacgagaacattaagagcttcatc
tgggacctcatcaccccaacggaggacgggcagagccgcacactctccaaccactctggc
ctgtctgctcccgtgccccgaggacgtaaaggtaaaaagggcaagctgccagtgtcacag
ccccacatgccccaggccgactggctggccgactgcaacccagacgttctgctccaggag
gacagttacaagaggcatctaaaacatcactgtaacaaagtgttgctgcgggtccgcatg
ctgtactatctgcgacaggaagtcattggagacctggcagaccggatcctggaaggaact
gattcaagaaacgaactggatgtctggatcccgcagcccttccacgctgatgtccccgtc
gattggtgggacctggaggctgacaagtccctccttatcggagtctttaagcacggctat
gagaagtataactccatgcgagcggacccctccctgtgtttcctggagagggtgggcatg
cccgatgccaaagccatcgcagccgagcagaggggagcggacatggtggcagatggtggc
gagggtgaggaggaagaccctgagtataaacccctccggatgcctttcaaagacgacctg
gatgatttcaccaattctcctcttgacgataaagaagagtccatggatattgatggtgca
gaagtcgtcatcccaaagtctggtgaaaacggtaagccaggtaagctctactggccccca
gcctcggccctgaccgctcgcctgcgccgcctcatcaccgcctaccagcgcagtcacaag
agggagcagatgaggcaagaggctctctccaaacctgatggtcgcagacgtcggcgtcac
cgcgaagagatcctgtctatggtgactgaaggaggaccgtacggtcaggacgtggcagct
gcaacagcctacctggctgaaagcgggcctttcatgaagagctcaccgttcctgccagag
agcgccgccctgctggctgatggtgcagcctactttaaggagagacggcagagatggacc
aggcgggaggaggccgatttctatcgtgtggtgtctacgtttggagtggtgtacgacgtt
caccgccagtgcttcgactggtcccagttccgggccttcgctcgcctggataagaaatct
gacgagagtctggagaaatactactatgcctttgtggccatgtgtaaacgcgtgtgccgt
atgcagatcaaaggagacgcagcagatctagcggaccccaccctgataatcgatccaatc
acagaagagagagcatcacgcactctgtatcgcatcgaacttctccggcgaatcagagag
caggtcctgccccatccacagctggaggagcgcctacgtctctgccagcccagccaggac
ctcccagcgtggtgggaaccaggccgacacgaccgcgaccttctctgcggagccgccaag
cacggagtcagtcgcacggactatcacatcctcaatgaccctgagctaggcttcctggag
gcccaccgcaaattcacccagggcaagggagccgaagctgcaccagcttcaaatcctctt
actccactggctctggttaaagaggaggagatgaaggaggagcagggagattgcatagag
gtaaaacctgtaattgaaactggtgatgaccggaaagaggaagttaaggaggagaagcct
gtggagaacactgaggtgaagcctgaatgtgagctcaagcaggaggaacccaaagaagag
caaaagatagaggctctagaagaggtggaagataaagaaaaggacggcgagatgaagact
gaaacttctgaaatgtctaacggagagaaagctactgaacctgagcttacagatgcagta
cctgaatcggctcctgtggagacacctcctgaacagctgaacgccgcctctggagctcca
gagagtgacagcaaagcaaacactgacaaaaccctcgaagaagaggaagaggagaagatg
gacgaggatgacaaatctgagaagtcatctcaggctgaagctggagggtcctctgagagg
aagaactttgatgaggagagtaacgcctccttgagcacagcacgggacgaaacgcgcgac
tactttttggtggatgatgtcgaaccgtctccttctcaagtgtttggagaccgaaccatg
ttttccttctggcctaaggacagggtaatgatcaatcgtatggacaacatctgtgaggcg
gtcatgaagggcaagtggccgtccaacaggaggcagttctttgacttcccaggcctgttg
cctggatacggtgctatgacgacggacagccccctgccgaggaggggtctgggtgatctc
tccatgatgagccagaccagctatagtggcagcgaggacctcaccatgtcaccacaggtc
aacaaggatgaggctctgagtctgtctgtcccacggcagcggagacgccggaggagaaaa
atagagattgaggcagagcgggccgccaagcgccgtaacttgatggagatggtcgctcag
ctgagggaatcgcatgctgctgaaggtcaggctcaggccatggacctgaccaagaccctg
cacggcctggcgcccgcagcctcgtcctcctcctcagttttccctggagctggagccatg
gcttcctcggcagccctcaaggcacagatggagctgctgcaggcgggcggagcgtccagg
gccaacggctccctgctggaggtggagctgcccacccgtaggaggaggggccggaggaaa
aacgtggagggcttggagctgctcttcatgggcaacaagagaggacagcttagtgtggag
gattcagatgggaccaaagcttttgcagacggggcacacgtgccagaccgagcacagaga
cacattccagctcctgcaccccaggcctccagcgccgccctggaggagagcagcctgcag
ggagaagatgggacgagcactaaggacctacgggagtggctgaggcagcaccccacttac
actatggacatgcctggatatataccaaagaatgaggagctgctcctctcacagttgggc
aaaccaaagcagaagaggcaccgctgtcgtaaccccaacaagatagacataaacaccctg
accggagaggagagggtccctgtggtcaataagagaaacgggagaaagatgggtggtgct
atggctcctcctatgaaggatttgccacgttggctggttgaaaatccagaatttgccatc
tctcctgattggacagatattgtcaaacaatcgggtttcctcccggagtccatgttcgac
cgtctcctgacaggaccggtagtcagagaagagggcgtacggcgccggggcagacgaccc
aaatcagagatcgctaaagcggcggcggcagctcaggcagctgcagcggcagcctccacg
tccggcgtgaaccccttactgatgaacggtctgtttggaggcatggacctgaccagcctc
cagagtttacagagcctgcagagcctccagctggccgccggcctcatgggtttccctccg
gctctggccggtggggcagcggacagtaagcacgctgcggccatgctgcccttaatgctg
cctggcatgggcggcctgcccaacatgttcagcctcgggggtctgttcggtggcaatcta
gcggctgccactgcaacaactgcaaacgcagcagcagtagcggcggcagcagcagcagcg
gcagcagctcctgagcaggcagaatctgaggagaaagcccagactaagaaaaatgaggaa
agcaatgatgctgtggaggaccgtgatgaccagacgactaaagaggaagacgagaaggaa
gtctcaaaggataaggtagataaacctgccgaggcggagtcagctgaaaccaatggtgat
gctactttaggtgctgcagcggctgctgccgctgcggctgctgctgctgccgccggtatg
tccaccaatgctctggcctttaaccccttcctgctgtccaccatggctccaggcctgttc
tacccatccatgtttctgcccactggactcgcgggcttgggcataccgggcttttctcca
gctgctctcgctgacctccagaacgccatgtctggatctttaggagccgccactgaggaa
agcaaagaatccaagaaagaggcccagaatccaggacgggaccagaacgccttaatgacc
agcgccggccaagttgaacacgttcttgacgacagcgactctgaggagagccagaacaag
acggctgactcgtccgtgatggatgaggacctggcgggacctgctgaggaactggactct
ttggaaggtggagatgaggatgacgacgatgatctggatgaacctggagaggaagatgag
gataaaagtgactga
DBGET
integrated database retrieval system
