Astyanax mexicanus (Mexican tetra): 103041929
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Entry
103041929 CDS
T05042
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103041929 (zeb1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
103041929 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
103041929
NCBI-ProteinID:
XP_007239443
Ensembl:
ENSAMXG00000010069
UniProt:
A0A8B9HU58
LinkDB
All DBs
Position
4:complement(26093936..26131924)
Genome browser
AA seq
1350 aa
AA seq
DB search
MADGPRCQRRKQANPRRNSVRSFSNVSEAASDSDDEDKLHIVEEDSISDAPEEKPTVFQL
SASQQLHNGHREDDGNLGPDPLIQEIRVKEECITDEEDEEGHAHGSPQQGTEEAVYSEVP
EEEQSTPERGGHDENGTPDEFSQLHTCPYCSRGYKRHTSLKEHIKLRHEKSDNDFSCSLC
SYTFSYRTQLDRHMTAHKNGREQRAVPQSGGNRKFKCTECSKAFKYKHHLKEHLRIHSGE
KPYECSNCKKRFSHSGSYSSHISSKKCVGPPPTVNGLSRTPGVKAALTLSQPTRILLREK
VDICNKPLQEQLPPKQIKQEPVNHELKPVTTTPIVSTTTTTTTATTNNGVGITVPTAAPQ
GVVQTLVVPTVGLVQPISINLSDLQNALKAAMDGNVIRQVVATTNANGTTAKVVGQMQPQ
VQAMVMQAPQPQGQMISAISLPVVDQEGNAKIIINYNMDPQISTSKINTLQPVLTQPTVA
QAKVLQSNVASPKVVQMNSTQPPKVVQVNSTQSTKLLQVNSTQPPKVVQVNSTQLPKVVQ
VNSTQLPKVVQVSSSQTPKVVQMDSNQPAKVVQVNSQPNITLTQMSNTAKHVPTQINILK
PVQTNPNKVPSIIKVTKLLQSHPAQTKHTQPTLLLLRRADGSQGLVVRQLTTVHPNTKVT
VPIESKCTEQESSPEKTAMPEKQTSPVQLSQAVEDSSTSKDNCEPEDLSGTLLQDIQIKT
EPMSPTEIDSGNQTDCGGGALRSDGEREIVRTAVKTTGFESTAHCGVACGDGFHNYATCL
FCDNSPSSEDIFNCLNSNDPGSGTSLSSLLGEDDSGPPVECLLPLLKAYSKDSDPTEEHL
ARVAESVSLPEDVVTRWFQRMRSKKISLRALGHHKNKQQTIESTPSDPSTDTEPQIHNTS
SDHHEDSLAEQNSAPSSPLNLSAGDLIIVKTEESEEEGQAEPLDLSLPKSSCKNANTSVT
TSVSTTKQSLPAQEEPLNLTCLKKDTLPGSTIYVTQPTTGPINIVAPLQTLVAIAEPGGV
PCLRAAFSPNKRTILIPQLSYTYATPSTNSTAHITNSTSKIITTTTPPSTDREGAVILND
CQEKASAGVESLSMWDGQSESDLSPNRKRRKLLGGQYACDLCDKIFQKSSSLLRHKYEHT
GKRPHECGICKKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK
KETHNQPEPASTSSQLDSDPDPDERESEAEEEEEEDDEEQEGERDANEDMEFAGFDMSEI
RVVRVGEEYDEDDEEDEEEEGGGGEDEEDLMEEEEAMERQPEGMNGLEEEEVYELDLGDC
TDEEQQELEPPEDSEVTDCVESRSVATAEG
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggccccaggtgccagcgcagaaagcaggcgaacccgcggaggaacagcgtg
aggagtttctccaatgtgtcagaagcagcgtcagattccgacgatgaagataaactccac
atcgtggaggaggacagtatttcagacgctcctgaagaaaagcccacagtattccagctc
agtgcatcgcagcagctacacaacggacacagagaggacgatggcaacctggggccagac
cctttgatacaggaaattagagtcaaagaggagtgcataactgacgaagaggatgaggaa
ggtcacgctcatggatcaccacagcaggggactgaagaggctgtttactcagaggttcca
gaggaggagcagagcacgcctgagagaggaggccatgatgagaacggtacaccggacgag
ttctcccagctgcacacgtgtccctactgttcccgggggtataagcggcacacgtctctg
aaggagcacatcaaactgcgtcatgagaagagcgacaacgacttcagctgctccctctgc
agctacaccttcagctaccgcacacagcttgaccgtcacatgaccgctcacaaaaacgga
cgcgaacagcgggcagtgccacagtctggaggaaacaggaagtttaagtgtacagagtgt
tctaaagcctttaaatataaacatcacctgaaggaacacctgcggattcacagcggtgag
aagccatatgagtgctccaactgcaagaagcgtttctctcactctggttcctacagttct
cacatcagcagtaagaagtgtgtaggacctccccctactgtcaacggcctctctcgcacc
ccaggagtcaaagctgcactcaccctctcgcagcccacgcgcattctcttacgagagaaa
gtggacatttgtaacaaacctttacaagaacagctcccacccaaacagatcaaacaagaa
cctgtaaaccacgaacttaagccagtcacaactacgcccattgtttccacaaccactacc
accaccactgccaccacaaataatggggttggaataactgttcccactgctgcccctcag
ggtgtggtacagactttggttgtacccactgtgggtctagtccagccaatcagtattaac
ctgagtgacttgcagaacgccctgaaagcagcaatggatggaaacgtgatccgccaggtt
gtggctaccacgaacgctaatggaactaccgctaaggttgttggtcagatgcaaccacaa
gtacaggctatggtcatgcaggctcctcagcctcaggggcagatgatctctgccatctct
ctcccagtggtagatcaagaaggaaatgccaaaatcatcatcaattacaatatggaccca
caaatcagcacttcaaagatcaacacgttacagcctgttcttacacagccaactgtggca
caggcaaaagtgctgcagtcaaatgtggcatcaccaaaggtggtacagatgaactcaacg
caacctccgaaggtggtgcaggttaactcaacacaatccacaaagctattacaggttaac
tcaactcagcctcctaaggtggtacaggttaactcaacccaacttcccaaggtggtgcag
gtcaactcaactcagcttccgaaggtggtgcaggttagctcatctcagactccaaaggtg
gtgcagatggactcaaaccaacccgcaaaggtggtgcaagttaactcacaaccaaacatc
actttaactcaaatgtcaaataccgctaagcatgtacccacgcagataaacatccttaaa
cccgtccaaactaaccccaataaagtaccatccatcatcaaggtaacaaagctgctccaa
tcacaccctgcgcagaccaagcacacgcagccaacactgctgcttttgagaagagcagac
gggtcgcaggggctggtagtcagacagttaacgactgtacatccaaacacaaaagtaact
gtacctatagagtcaaaatgcacagagcaggagtcgagccctgaaaagacagcaatgcca
gaaaagcaaacgtctcctgttcagttgagccaggctgtagaagattccagtacttccaaa
gacaactgcgagcctgaggacctgagcggcacgttgctgcaggacattcagatcaaaacc
gagcccatgtctccaacggagatcgactctgggaatcagacagactgtggtggaggggct
ttacgatcagacggtgagagagagatagtaagaacagcagtgaagaccaccggcttcgag
tcaacggctcactgtggcgttgcatgtggcgacggcttccataactacgccacgtgcctc
ttctgtgacaacagtcccagcagcgaagacatcttcaactgtctcaacagcaacgaccca
ggatctggaacatctctctccagtctactgggggaagatgactctggacctccagtggag
tgcctcctgcctcttctcaaagcgtacagtaaagactcagatcctactgaagagcacctg
gcgagagtggccgaatcagtcagcctgcctgaggatgtagtcaccaggtggttccaaaga
atgcgctccaagaagatatcactccgagctctcggccatcataaaaacaaacagcaaact
attgaaagcactccatcagacccaagtaccgacacagaaccccaaatccacaacacttca
agtgaccaccatgaagactctttagcggagcagaacagtgccccttcttctccactgaac
ctctccgcaggtgatctcatcatagtaaagacagaagaatcagaggaggaaggacaagct
gaacctctggacctgtctctcccaaagtcctcctgtaaaaacgccaacacctcagttacc
acatcagtgtccaccaccaagcagtccctgcctgcacaggaggagccgctcaacctcacc
tgcctcaagaaagatacactgcctggcagcaccatctatgtgacacaaccaaccacaggt
cccataaacattgtagcacctttgcaaacactggttgccatagcagagccgggtggagtt
ccctgcctccgagctgccttctcccccaacaaacgcaccatcctcatcccccagctgtcc
tacacctacgccacgccctcaacaaacagcaccgcacacatcaccaactccaccagcaag
atcatcaccaccaccactccaccatccacagacagagaaggagcagtcatacttaatgac
tgtcaggagaaggccagtgctggtgttgaaagcttgtccatgtgggatgggcagagtgaa
agtgacctctccccaaacagaaagcggaggaagttgctgggcggccaatacgcatgtgat
ctgtgtgacaaaatctttcagaagagcagctcgttgctccgacacaaatacgaacacaca
ggtaagcgtccccacgagtgcggcatctgtaagaaggcatttaaacacaagcaccacctg
atcgagcacacccgtcttcactccggtgagaagccctaccagtgtgacaagtgcggcaaa
cgcttctcgcactcaggctcttactcccagcacatgaaccatcgctactcttactgcaag
aaggagactcacaaccagccggagccggccagcacctcctcacagctcgactcggacccg
gacccagacgaacgagagagcgaggcggaggaggaggaggaggaggatgacgaagagcaa
gagggagagagagatgcaaacgaagacatggaatttgctggctttgacatgagtgaaatt
cgagtggtcagagttggggaggaatatgatgaggatgatgaagaggacgaggaagaggag
ggtggaggaggtgaagatgaagaagacctgatggaggaagaggaggcgatggagaggcaa
cctgagggaatgaatggtctggaggaggaagaggtgtacgagttggacctgggggactgc
acggacgaggagcagcaggagctggagcccccggaggacagtgaggtaactgactgtgtg
gaaagcaggagcgtggctacagcagagggataa
DBGET
integrated database retrieval system
