Astyanax mexicanus (Mexican tetra): 103042100
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Entry
103042100 CDS
T05042
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103042100
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103042100
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103042100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
CCDC171
zf-C3HC4
zf-rbx1
CEP135_TSGA10_CC
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
CCDC170_1st
zf-RING_5
zf-ANAPC11
CCDC39
Rod_CreS
HIP1_clath_bdg
MAD
zf-C3HC4_4
WEMBL
HmpF
zf-RING_Vps41
zf-RING_16
TSNAXIP1_N
Fez1
KIF21A_2nd
Sec3_CC
FAR1_N
Gp58
CENP-F_leu_zip
Zn_ribbon_8
PII1_coiled_coil
LEKR1
At4g38062_N
RINGv
zf-RING-like
CALCOCO1
zf_RING_Vps8
TPR
CCDC18_2nd
AAA_13
KxDL
zf_RING_Vps8_fungal
RING_XB3-XBAT31
T3SSipB
CLIP1
FANCL_C
GAS
ODF2_C
U-box_ZFPL1
Spectrin_Anc-1
KASH_CCD
COG3_N
Baculo_PEP_C
PMD1-like
SLX1_C
Rho_Binding
ODF2_N
EXOC6_Sec15_N
Phage_scaffold
ATG16
Motif
Other DBs
NCBI-GeneID:
103042100
NCBI-ProteinID:
XP_022538312
Ensembl:
ENSAMXG00000030724
LinkDB
All DBs
Position
24:29565181..29575505
Genome browser
AA seq
451 aa
AA seq
DB search
MPIRAYCTICSDFFDHSKDVAAIYCGHTFHYACLLQWFQSAPTKTCPQCRKQVSSRHIIN
KLFFDIAPEDEGSAADPESLQNELDRMKAAFSEKERGWREKQKAADNLRETIEKQRADLE
RVRREIGEKEMLCTTLRKQMQYLESQHRESEAAKEEAKRLRVKMKTYESLNAVLQGQRAE
VEAMISDMGIGQSAVEQLSIYCVSLKKEYDNLKGSLRSSNDMCEKLKRELFSSNNKLQKA
TFEMNRAKEDMKALQKDLTNADKEITSLKKKVEILQKTLSTPTRTNEAISRLVFESPAPL
ELKPPHLHQPADGQDIDLNVTFDISTPEQVEKKPVTVPAKKMRLDPAQSSSKQSENIFTS
KNSHTKEEEDSMFRNSLLFRKKMFGSMLDPHSKPGSVRTGYDGLGGRTKFIQPSPLAEIR
PLIMKAKRKKVSRPAPNKLSVNLPTLDGFLE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgggcgtactgtaccatttgctcggatttctttgaccactcaaaggatgtg
gctgcgatttactgtggccacaccttccactatgcgtgtctgcttcagtggttccagtct
gctcccactaaaacctgcccgcagtgcaggaaacaggtcagctcgagacacatcatcaat
aagctgttttttgatatcgcgccagaagatgaaggatctgcggccgatccagaaagctta
cagaacgagctggacagaatgaaagcagctttttctgaaaaggagagaggctggcgggag
aaacagaaagcggctgataatctgagggagacgatcgagaaacagagagccgacctggaa
agagtgaggagagagataggagagaaagaaatgctctgtactactcttcgaaagcagatg
cagtatctggagagccagcacagggaaagcgaggcggctaaagaggaggccaaacgactc
cgagtcaaaatgaaaacctatgagagtctgaatgcagtcctgcagggccagcgggcggag
gtggaggccatgatttcagacatgggcatcggccagtcagctgtggaacaactgtccatt
tactgcgtctctctgaaaaaagaatatgacaatctaaaaggaagcctcagatcctccaat
gacatgtgtgagaagctgaaaagggaactgttctcctcgaataataagttgcagaaagcg
acatttgagatgaacagagcaaaggaggacatgaaggccctgcaaaaggatctcactaat
gcagacaaagaaatcacaagtctgaagaagaaggtggagatcctgcagaagaccctgagc
acgcccacccgcaccaacgaggccatcagccgactcgtgtttgaaagtcctgctcctctt
gagctgaagcccccgcacctgcaccagcctgcagacggtcaggacattgaccttaacgtg
acctttgacatcagcacacctgagcaggtggagaaaaagcctgttacagttcctgcaaag
aagatgcgtctggatccggcacaatcttcatccaaacagagtgaaaacatttttacgagt
aagaactctcatactaaagaagaggaggattccatgtttcgcaactcgttgctgtttagg
aagaagatgtttggcagcatgctcgacccacacagcaaacctggctctgtgagaacaggc
tacgacgggctcggaggaagaaccaaatttattcagccttcccccctggctgagatcaga
cccctcatcatgaaggccaagaggaagaaggtgtcgagaccagctcccaacaaactgtcc
gttaacctgcccacactggacggcttcctggagtga
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