Astyanax mexicanus (Mexican tetra): 103042144
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Entry
103042144 CDS
T05042
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amex04054
]
103042144
Pattern recognition receptors [BR:
amex04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103042144
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
FISNA
NLRC4_HD2
PRY
NOD2_WH
LRR_4
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103042144
NCBI-ProteinID:
XP_049324274
LinkDB
All DBs
Position
1:125326905..125551493
Genome browser
AA seq
1534 aa
AA seq
DB search
MMEPQDSSDGEEPSDPKVKEAVSPEPSAVFMKSDPLTISIGGGGSESCLQKSRGELPEPS
CVSMKSHNSMFNPPNFSNKAEPPEPSCVSMKSHNSMFNPPNFSNEAEPPEPSCVSMKSDN
SMFNPPNFSNEAEPPEPSCVSMKSHNSMFNPPNFSNEAEPSEPSCVSMKSHNSMFNPPNF
SNEAEPSEPSCVSMKSHNSMFNPPNFSNAGILKRGKSDLLQDQSRCGLCEQLFTDPVSIT
CGHSFWRLCINRYWDETDQTGDFCCPSCRKRSKTHPALHPHTEESLKTDNYQKDDVLHRV
LQQHKTCMKNRYESLFEGIKTQENRTLLNRIYTQLYIIEGESEGVNEEHEVIKMEKTSNK
YLQETPINCLDIFRPVEDPKEGMEGVNNTAVMDNSVRRKKRKEDKGPKVLRTVLTKGIAG
IGKTVSVQKFILDWAEGTANQEVDFMFVLPFRELNLIKDEQYSLNTLLCTFHPELRDLDS
RICDEHKVVFIFDGLDESRIPLNFSQCEKVSDITTTSSVGVLMTNLLKGELLPSAHIWIT
SRPAAANQIPHQYINRVTEIQGFNDPQKEEYFRKRISDQDQAQKIISHIKTARSLHIMCH
IPVFCWISATVLQRIMKQSNTEIPKTLTEMYSHFLITQTNTKNEKYEENLNLDPVELLES
NRTMFLKLAKLAFNQLMKGNMMFYEEDLRECGIDLTEASVYSGICTEIFREECVLYQRKV
YSFVHLSFQEFLAAFYVFHCYLSKNTEELMDFEPQNRKWPENVPLDELLIGAVSKASESQ
NGHLDLFLRFLLGISVDSSQKVLYSLLIHTENTSDSINKTVNYIRRLISTKDLDTDRSIN
LFLCLTEMNNQHLSRHVQKYINSDKSSRKDLSALECIALSYMLQISEEVLDELDLRKYST
SRIAYMKLFPAVNNCRKALLAGCDLTKDHCETICCVLKSESSTLKELDLSNNDLQDSGVE
LLSAGLKSSHCKLETLRLAMCNLEVKACKHLASVVNVESSTLKELDLSNNDLQDSGGELL
SAGLKSSHCKLQILRLAMCNLGVKACENLASVVNVESSTLKELDLSNNDLRDSGGELLSA
GLKSSNCKLQILRLAMCNLGVKACENLASVVNEESSTLKELDISNNDLQDSGVELLSGGL
KSSHCKLQILRLAGCDLTIKQCETICCTLRSESSTLKELDLSNNDLQDSGVEPLFDGLQS
SYCILDTLRLAMCNLGVKACENLASVVNLVSSCLKELDLSNNDLQDSGVELLSGGLKSSH
CKLQILRLSGCMVSEKGCSSLAAALSSNPSHLKELDLTFNHPGESGQQLFSARPEDPGYT
VRMESGGAIRMKPGLKKYGCDFTLDPNTVNPRLSLSEENRRVEIREELQSYPDHPERFNW
YQQVLSREGVTGRCYWEAEWSGRGASVALSYKTISRKGDRSDCGFGGNINSWSLNCSDYR
YSVLHNNNRTDLPPPPSGCRRVGVYVDCPAGTLSFYSVSTDTPSHTLTHLHTHSHTPSHT
LTHLHTFYTTFTQPLYAGIGFYGSGSSVTLCKIV
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctcaagactccagtgatggagaagaaccctctgatccaaaggtgaaggaa
gcagtttctccagagcccagtgctgtgttcatgaagagtgatcctctaaccatcagtatt
ggaggaggaggctctgaatcatgtctgcagaaatctagaggagaactacccgaacccagc
tgtgtatctatgaagagtcacaactcgatgtttaacccccctaacttcagtaataaagca
gaacctccagaacccagctgtgtatctatgaagagtcacaactcgatgtttaaccctcct
aacttcagcaatgaagcagaacctccagaacccagctgtgtatctatgaagagtgacaac
tcgatgtttaaccctcctaacttcagcaatgaagcagaacctccagaacccagctgtgta
tctatgaagagtcacaactcgatgtttaaccctcctaacttcagtaatgaagcagaacct
tcagaacccagctgtgtatctatgaagagtcacaactcgatgtttaaccctcctaacttc
agtaatgaagcagaaccttcagaacccagctgtgtatctatgaagagtcacaactcgatg
tttaaccctcctaacttcagtaatgctggaatattgaaaaggggaaagagtgatctactg
caggatcagtccaggtgtggactgtgtgaacagctttttacagatccagtctctatcacc
tgtggacacagtttctggagactgtgcatcaacagatactgggatgaaactgatcaaact
ggagatttctgctgtccctcctgcagaaagagatctaaaacacatcctgccctacatcca
cacacagaagagtctctaaaaactgacaactaccaaaaagatgatgtccttcacagagtt
ttacagcaacataaaacctgtatgaagaacaggtatgagagtttatttgagggaattaaa
acacaagagaacagaaccctcctgaacaggatttacacacagctctacatcatagaggga
gagagtgaaggggtgaatgaagaacatgaggttataaagatggagaagacttcaaacaaa
tacttacaggaaactccaatcaactgcttagacatctttagacctgtagaagatcccaaa
gaaggaatggaaggagtaaacaatacagctgtgatggataatagtgtcagacgaaaaaaa
agaaaagaagataaaggaccaaaagtgcttagaactgtgctgactaaaggcattgctggc
atcggaaaaacagtttctgtgcagaagttcattctggactgggcagagggaacagccaat
caggaggtagatttcatgtttgtgcttccattccgagagctgaacctgattaaagatgag
cagtacagtcttaacacacttctctgcacttttcatcctgagctcagagacctggactct
aggatttgtgatgagcacaaagttgtgttcatctttgatggtctggatgaaagcagaatt
ccactgaatttttcacagtgtgagaaagtgtctgacatcaccacgacatcatcagtgggt
gtgttaatgacaaaccttctcaaaggagagttgctgccctctgctcacatctggattacc
tcccgaccagcagcagccaatcagattcctcatcagtatatcaaccgtgtgacagaaatt
caggggtttaatgacccacagaaggaggagtacttcaggaagagaatcagtgaccaagac
caagcccagaaaataatctcccacattaagacagcgaggagtctccacatcatgtgccac
attcccgtcttctgctggatctcagccactgtgcttcagagaatcatgaaacagagtaat
acagaaatccctaaaactctgactgagatgtactcccactttctgatcactcagaccaac
acgaagaatgagaagtatgaggagaacttaaacttggatccagtggaattgctggaatct
aataggaccatgtttctgaaactggctaaactggctttcaaccagctgatgaaggggaac
atgatgttctatgaagaggacctgagagagtgcggtattgatctcactgaggcctcagtg
tattctgggatctgcactgagatctttagggaggaatgtgtgctttatcaaaggaaggtc
tacagctttgtacatctgagctttcaggagttcctggctgctttctatgtgtttcactgc
tacctgagcaagaacacagaggagctgatggattttgagccacagaacagaaaatggcca
gaaaatgttccactggatgagctcttgataggagcagtgagcaaagcctcagagagtcag
aatggacatctggatcttttcctccggttcctgctgggcatctctgtggattccagtcag
aaggtcctatacagcctcctgattcacacagagaacacctcagacagcatcaacaaaaca
gtgaactacatcagacgcctaatctcaacaaaagatcttgatactgacagatctataaac
ctgttcctctgtctgactgaaatgaataaccagcatttatccagacatgttcagaagtac
ataaattcagacaaaagctcaagaaaggatctgtctgctctagagtgtatagctctgtcc
tacatgctgcagatctcagaggaggtgctggacgagctggacctgaggaaatacagcaca
tcaagaattgcttatatgaaactgtttccagctgtgaacaactgcagaaaggctctacta
gctggctgtgatctcaccaaggatcattgtgaaactatctgctgtgttttgaaatcagaa
agttccaccctgaaagagctggacctcagtaataatgatctgcaggattcaggagtggag
ctgctctctgctggactgaagagttcacactgtaaactggagacactcaggctagctatg
tgtaatcttgaggtaaaggcatgtaaacatctggcatcagttgtaaacgtggaaagttcc
accctgaaagagctggacctcagtaacaatgacctacaggattcaggaggggagctgctc
tctgctggcctgaagagttcacactgtaaactgcagattctcaggctagctatgtgtaat
cttggggtaaaggcatgtgaaaatctggcatcagttgtaaacgtagaaagttccactctg
aaagagctggacctcagtaacaatgacctacgggattcaggaggggagctgctctctgct
ggtctgaagagttcaaactgtaaactgcagattctcaggctagctatgtgtaatcttggg
gtaaaggcatgtgaaaatctggcatcagttgtaaatgaggaaagttccaccctgaaagag
ctggacatcagtaacaatgacctgcaggattcaggagtggagctgctctctggaggtctg
aagagttcacactgtaaactgcagattctcagactagctgggtgtgatctcaccataaaa
caatgtgaaactatctgctgtactctgaggtcagaaagctccaccctgaaagagctggac
ctcagtaacaatgacctgcaggattcaggagtggagccgctctttgatggactacagagt
tcctactgtatactggatacacttaggctagctatgtgtaatcttggggtaaaggcatgt
gaaaatctggcatcagttgtaaacctggtaagttcctgcctgaaagaactggacctcagt
aacaatgacctgcaggattcaggagtggagctgctctctggtggactgaagagttcacac
tgtaaactgcagattctcagattatctggttgtatggtctcagagaaaggctgttcttct
ttggctgcagctctgagttcgaatccctcccacctgaaggaactggatctgacctttaac
cacccaggggagtcaggacaacagctgttctctgctagaccagaagatccaggctacacg
gtcagaatggaatctggaggggcaatcagaatgaaaccaggactaaagaaatacggctgt
gatttcacactggatccaaacacagtaaaccctcgtctctctctgagtgaggagaacagg
agggtggagattagagaggagctgcagtcgtatcctgatcatccagagagatttaattgg
tatcagcaggttctgagtagagagggagttactggacgctgttactgggaggctgagtgg
agcgggagaggagcttctgtagctctgagttataaaaccatcagcaggaaaggagacaga
tcagactgtgggtttggagggaatataaactcctggagtctgaactgctctgattacaga
tactctgttcttcacaataataacagaactgatctcccccctcctccctccggctgtagg
agagtaggagtgtatgtggactgtcccgccggcactctgtccttctacagcgtctccact
gatacaccctcacacactctcacacacttacacacacactcacacacaccctcacacact
ctcacacacttacacacattctacaccaccttcactcagcccctctatgcagggattggg
ttttatggttctggctcctcagtgactctgtgtaaaatagtataa
DBGET
integrated database retrieval system
