Astyanax mexicanus (Mexican tetra): 103042269
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Entry
103042269 CDS
T05042
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X4
KO
K14407
cleavage stimulation factor subunit 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103042269 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103042269 (cstf2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103042269 (cstf2)
U7-dependent histone pre-mRNA processing factors
103042269 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
Cementoin
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
103042269
NCBI-ProteinID:
XP_007248822
Ensembl:
ENSAMXG00000021477
UniProt:
A0A3B1K3N5
LinkDB
All DBs
Position
10
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AA seq
514 aa
AA seq
DB search
MANLAAAVAAAAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRET
GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIES
PYGDNCPTEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALL
QAQVVMRIVDPEIALKMLHRQAAVQPINPSQPGPGPVPVSNQPLPQPNAPVSQPQPMPGM
HVNGAPQMMQPAQMGGGVPVPMPGQGPMPGQGPMQGQGPMQGQGPMPGQGPMPGQGPMPG
QGPMPGQGPLGAGVPMVDPRAPMRGVPPGPQGIPPRGLLGDGPNDPRGGSLVNVTGDVVE
PGRGYIGGPPPHQGPPIHMAPPDMRGPHDMRGAPMMAEPRGPMMEQRGPSMDSRAPIPQG
RDPRAVDARGPVAGQRVPVAGGMPGPPPHAMGASAPPPARPGPATDVTSQDHEKAALIMQ
VLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctggctgctgctgtggccgcggcggcggggagggacccggcggttgaccgc
tctctgcgctccgtcttcgtgggaaacatcccgtatgaagcaacagaggagcagctgaag
gacatcttttcagaggttgggctcgtcgtcagcttcaggttggtgtatgacagagagacg
gggaaaccgaaaggctatgggttctgtgagtatcaggatcaggagacggccctcagtgcc
atgcggaacctgaacggcagagagttcagtggcagagctctgcgtgtggacaacgccgcc
agtgagaagaacaaggaggagctgaagagtttgggcacaggggctccaatcatcgagtcc
ccatatggagacaactgtccaacagaggaagctccagagtccatcagcagagctgtggcc
agcctgccgccagagcagatgtttgagctcatgaagcaaatgaaactgtgtgttcagaac
agccctcaggaagcgaggaacatgctcctacagaacccccagctcgcctacgctttacta
caggcccaggtcgtcatgaggatcgtagaccctgagatagccttgaaaatgcttcatcgg
caagctgcagtgcagcccataaaccccagtcagccgggtccaggcccggtgcctgtatcc
aaccagcctcttcctcagcccaatgctcctgtgtcccaacctcaacctatgccgggaatg
cacgtgaacggagcccctcagatgatgcagcctgcgcagatgggagggggcgtgccggtg
ccgatgccgggacagggccctatgccgggacaagggccgatgcaaggacagggtcccatg
caggggcaagggcctatgccgggacaggggcccatgcctggacaaggaccaatgccagga
caggggcctatgcctggacagggccctctgggggccggagtacccatggtagacccacgg
gctcctatgcgaggggtgccaccaggaccacaaggaattcccccaagaggcttactgggt
gacgggcctaatgacccgcggggaggttcgctggttaatgtcactggggatgttgtggaa
ccaggccggggttacatcggaggccctccaccacaccaggggccccccatacacatggcc
cctccagacatgcgtggaccccacgacatgagaggagctccaatgatggccgagcccaga
ggaccaatgatggagcagcgtggcccatctatggactccagagctcccattcctcaaggt
cgtgatcctcgggctgtagacgctcggggtcctgtggcaggtcagagggttccagtggcg
ggtggaatgccgggtcctcctcctcacgccatgggagcaagtgcgccccctcctgctcga
cctggccctgcgacagatgtgacctctcaggatcacgaaaaggctgctctaattatgcag
gttcttcagctgaccccagagcagatcgccatgctgcccccagagcagaggcagagtatc
ctcatcctgaaagagcagatccagaagacggccggcgcgccctga
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integrated database retrieval system
