KEGG   Astyanax mexicanus (Mexican tetra): 103042326
Entry
103042326         CDS       T05042                                 
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
  KO
K25207  zinc finger SWIM domain-containing protein 8
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    103042326 (zswim8)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     103042326 (zswim8)
SSDB
Motif
Pfam: ZSWIM4-8_C SWIM
Other DBs
NCBI-GeneID: 103042326
NCBI-ProteinID: XP_007258778
Ensembl: ENSAMXG00000021135
UniProt: A0A8T2LVU4
LinkDB
Position
7:41920891..41958466
AA seq 1933 aa
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSTDKKSASFCWARAVQQQRSKMGAGGEPLEPGGAGGGGRGGGGDAGASEHKS
RISSHPPQQEVAVRPKETIVSKRKGLPGVNSGGMLVRLGGSMSLSLDEGTKGAYKASGSS
SSTSGKAKLTQSSKSSCGGSGSVGGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGA
EASNTFDFLPPPPEMLPSPSPLLREPRKYGSGSGNAAKDRTFEGKRVTHSAIPLAADTPH
CFSKENAMVVAVENEVDVEAELEENGADEDQVEDVRPSTSAAAAVPVAAKASRGRREGEG
SGASGTPGPQVPEAAAAAAAGGDPVGEDDYQAYYLSAASEEGAERGVPDSSHEEEPDIFA
GIKPLEQEGRMEVLFACAEALYAHGYSNEACRLAVDLARDLLANPPDLKVEQPQTKGKKS
KVSTSKQTQVATNTLSKAAFLLTVLSERLEFHNLAFSTGMFSLELQRPPASTKALEVKLA
YQESEVVALLKKIPLGLVEMTAIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVS
PTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALM
ITYKDDQSKLKKILDKLLNRESQTHKPQTLSSFYSSKPATSSQKSPSKHNTHGTGGATGG
VSKHAAPTATGGSTSVQGVAGATGQQGGLTGVQSTAAGEAVGESREQDGTQSSSCEQQNE
VAPFKPEGTVPSRLALGGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSR
RPLRGGWTAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPE
CHAPHVPNQPSEAAAHFYFELAKTVLVKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFE
IGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLA
DRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAA
KGGGVYPEVLFEVAHQWYWLYEQTVGGGSSAQREGPSRCGANGGAGRRPVEGSCGVLDSS
GVMDSSGVATVTASVTAAAVVPVISVGSTIYQSHTIPGSAMAHAQGLHPYTTIQAHLPTV
CTPQYLGHQIPHVPRPAVFPVSSSAYPQGMHPAFIGAQYPFSVASGPHPPMAATAVTFPG
VPVPSMTQIAVHPYHTAEAALPLSTTVAVGGVHSASTIQAIQAASIPGLSTQPASLVSTP
FPLEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLL
GLAARLGVNYVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRC
QQAYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDILQNLKRGKQTKEL
WQRISLEMATFSP
NT seq 5802 nt   +upstreamnt  +downstreamnt
atggaactaatgttcgccgagtgggaagacggagagaggttctcctttgaagactctgac
cgttttgaagaggattccctttgctcatttatatcagaggcagagagcctctgtcagaat
tggagaggatggagaaagcagtctgctggccctaattcaccaactgttaagattaaagat
ggacaggttatcccactggtggagctgtcagccaagcaagtggcattccatatcccattt
gaagtggtggagaaagtctaccctcctgttccagagcagcttcagctccgtattgcctac
tggagctttcctgaaaatgaagaggacatcaggttgtactcttgcttggccaatgggagt
cctgatgagttccagcgtggcgagcagctctatcgggtgagggctgtgaaagatcccctg
cagataggtttccacctcagtgccactgttgtctcgccccaggctggccaatcaaagggt
gcctacaatgtggcggtcatgtttgaccgctgccggatcacttcctgcagttgcacatgc
ggagccggggccaaatggtgtgctcacgtggtggcgctatgcctcttcaggattcacaat
gcatctgctgtgtgtctgcgagccccagtatcagagtccctgtcaaggctgcagagggac
caacttcagaagtttgcacagtacctcatcagtgagcttccacagcagatcttgcctaca
gcccagcgtctcttggatgagcttctatcctctcagtccaccgctatcaacacagtatgt
ggagctccagaccctactgctggaccttcagcctctgaccagagtacctggtacctggat
gaatccacccttagtgataacattaagaaaacactgcacaaattctgcggcccttcgcct
gttgtgttcagtgatgtgaactctatgtatctgtcctccactgagcccccggctgcagct
gagtgggcctgcctactgagacctctgagaggtagagagccagagggcatctggaatctt
ctgtccatcgtcagggagatgttcaaaaggagagacagcaatgctgctccattactggag
atcctcactgagcagtgtctcacctatgaacagatcattggatggtggtacagcgtgcga
acatctgcatctcacagcagtgccagtgggcacacaggccgcagcaatggtcagacagag
gtggcggctcacgcgtgtgctagcatgtgtgatgagatggtggtgctgtggaggctggcg
gtgcttgaccccaccatgagcccccagaggcgtttggagcttgctgcccagctcaagcag
tggcacctcaaagtgatcgagattgtgaagcgtgggcagcaccgcaagtctctggacaag
ctcttccagggttttaagccagctgttgaatcctgctacttcaactgggaagtggcttac
cctctgcctggcattacttactgtagcacagacaagaagagtgcctccttttgttgggcc
agggcagttcagcagcagagatccaagatgggggcaggtggggaacctttggagccggga
ggagcaggaggtggagggcgtggcgggggaggtgatgcaggagcttctgaacacaaatca
cgtattagctctcatcctcctcagcaagaggtggctgtacgacccaaggagacaattgtg
agcaagaggaaaggcctgccaggagtgaacagtggtggaatgttggtgcggttaggaggt
agtatgtccctgtcgctagatgaaggtacgaagggtgcgtacaaagccagcggttcctct
tcctccactagcggcaaagccaagctgacgcagagcagtaaaagctcatgtggaggctct
ggttctgttggagggaagcaccccagcgctaagcgacgcaccagtagcgaggacagctct
ctggagcctgatatggctgaactgagcctggatgatggttcaagtctggcgttgggggcg
gaggcaagcaacacatttgactttctgcctccaccaccagagatgctgccctcgcccagc
cctctactgcgagaaccacgcaagtatggtagcggaagtggcaatgccgctaaggaccga
acatttgagggtaagcgtgtcacccactcagcgataccactggcagctgatacacctcac
tgcttctccaaagagaatgctatggtagtagcagtagaaaacgaagtggacgttgaagca
gaacttgaagaaaacggagcagatgaggatcaagtagaggatgttagaccctctacctca
gcagctgcagcagtcccagtagcagccaaggcttcccgaggccgaagagaaggtgaagga
agtggggcatcagggacacctgggcctcaggtcccagaggcggcggcagcagcagcagct
ggtggggacccagttggcgaagatgattatcaggcttactatctcagtgctgcttctgaa
gagggagcagagagaggagttccagacagcagccatgaggaggagccagacatcttcgct
gggattaaacctctggagcaggaaggacggatggaggtgctgtttgcatgtgcagaggcc
ctctatgctcacgggtacagtaatgaagcatgccgtctggctgtggacctcgcaagggat
ctgctggctaaccctcctgacctcaaagtggagcagccacagacaaagggtaagaagagt
aaggtgtcgaccagcaagcagacccaggtggctacaaacaccctgtctaaagcagccttc
ttgctgaccgtcctgagtgagaggttggagttccataatcttgcgttcagtactggcatg
ttttccctggagctccagagacctccagcctccaccaaggccctggaggtgaagctggca
tatcaggagtcagaagtggttgctttgctgaagaagattcctctgggtctggtggagatg
actgcaataagggacagagctgagcagctgcgtgatggaaacttctgtgattatcggcca
gttctgcccctcatgttggccagtttcatatttgatgttttgtgcacccctgtggtttct
ccgacgggttctcgcccacccagtcgaaatcgcaacaacgaaatgccaggtgatgaagag
cttggctttgaggctgctgttgctgcactgggtatgaagactacggttagtgaggcagaa
catcctttgctgtgcgagggcacaagaagggaaaagggagaccttgctttggccctaatg
attacctacaaggatgatcagagcaagctgaaaaagattttagacaagcttctcaaccgc
gagagccagacccataagccccaaacgctgagctcattctactccagtaagccagccacc
agcagccagaagagcccatccaaacacaacacccatggaactggaggagccacagggggc
gtgtccaaacatgcagcaccaacggcgacagggggttcaacttctgtccaaggtgtggct
ggggcgactggacaacagggtgggctgacgggtgttcaaagcacagcagcgggagaggcg
gttggcgagagccgagaacaagatggaactcagtcatcttcatgtgagcaacaaaatgaa
gtggctccctttaagcctgagggtacagttcctagccgcctggcactcggggggcgtgga
gcctatgggacacgctgctggggctcacctgtgcgacagaagaagaagcacacaggcatg
gcaagcattgacagcagtgctcctgagaccacttctgacagttccccaacgctaagccga
cgcccattgcgaggtggctggacggctgcatcctggggaagaggtcaagacagtgacagt
atcagcagctcatcttctgactccttgggttcatcatcatccagtggctcacgtagagct
ggtggaggagccagagctaagagcactgacaccagcaggtataaagggcgtcgcccggag
tgccacgctcctcatgtgcccaatcagccgtcagaagcagccgctcacttttactttgaa
ctggcaaagacggtgctggtgaaagctggaggaaacagctccacatccatctttactcag
ccctcagccagcgggggccaccagggaccccaccgcaatctgcacctctgtgccttcgag
atcggcctgtatgccttgggtctgcacaactttgtgtctcccaactggctttccaggacg
tactcttcccatgtgtcctggatcacaggccaggctatggaaattggtagtgctgccctc
aacatccttgttgagtgctgggatggtcaccttaccccaccagaggtggcatcactggca
gatcgggcgtcacgggcacgggaccccaacatggtgcgggcagcagcggagcttgccctg
agctgcctacctcatgctcacgccctcaaccctaacgagatccagagggcgcttgtgcaa
tgcaaagagcaggataatgtgatgctggagaaggcctgtatggcagtagaagaagcagca
aaagggggaggagtttaccctgaagtgctgtttgaggtggctcaccagtggtactggctc
tatgagcagactgtgggcggaggttcctctgcacagagggaaggcccgagccgatgcggg
gcgaacggtggggcgggtcggagacctgtagagggaagctgtggtgtgctggacagttca
ggggtcatggattcatcaggtgtagcaacagtgactgcgtctgtgactgcagctgctgtg
gtgccagtcatctctgtaggctctaccatttaccagtctcacacgatacctggctcagcc
atggctcacgcacagggtctgcatccctacacaaccattcaggcccatttacccactgtc
tgcaccccgcagtacctgggacatcagattccgcatgtgccccgccccgccgtcttccca
gtgtctagttctgcttatccacaaggaatgcaccctgcctttattggtgcccagtatcca
ttctctgtggcatctggccctcatccccccatggcagcgactgcagtcaccttcccagga
gttcctgtaccgtccatgactcaaattgccgtccacccgtatcataccgcagaagcagcc
ttgcccctcagcactactgtggcagtaggtggggttcactcagcctccacgatccaggct
attcaggcagcttctattccgggcctttccactcagccagcctcattggtcagcacgccg
ttccctttggaagatgagcagcatagtcagccaatcagccagcaagggctgcactacctt
cattcagcctacagagttggcatgctggctctggagatgctgggcaggagggctcacaac
gatcatcccaataacttctcccgtagcccaccatacacagaggatgtcaaatggctgctc
ggcctcgcagcccgacttggtgtaaattacgtgtaccagttctgtgtgggggctgctaaa
ggtgtgctgagtccgttcgtcctgcaggagatcattatggaggctctgcagaggctaaat
cctgcacacatacatgctcacctccgcactcccgctttccaccagcttgtgcagcgctgc
cagcaggcctatctacagtatatccaccaccggctgatccacctgaccccggcggactac
gatgactttgtgaacatcatccggagtgcccgcggggcgttttgcctgaccccggtgggc
atgatgcagttcaacgacatcttgcagaacttgaagagggggaagcagaccaaggagctg
tggcagcggatctctttggagatggccacgttttcgccctga

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