Astyanax mexicanus (Mexican tetra): 103042341
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Entry
103042341 CDS
T05042
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103042341 (vps35l)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Others
Retriever complex
103042341 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
103042341
NCBI-ProteinID:
XP_022524887
Ensembl:
ENSAMXG00000018619
LinkDB
All DBs
Position
15:complement(21165908..21191208)
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AA seq
965 aa
AA seq
DB search
MASVQWHARVRKYGAELQRCQLEATPVEQGDYHPLKPIIVTDSRSRRGGRKGSTSSSSSS
SSSVAMDPLSSMMEGTDPLSLFAAASASEVPTLSHSSSSVELGRKQRENEDEVGADFEPW
SAKRGEILSRFTTTEKLSINLFMGSEKNKASSPSSAVSEKVRTRLEELDDLEEGSQRELL
NLSQQDYVKRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDI
LDTFGRLVYERIWSMCSDPRPQPDSFSVEDVNDTAKETCLNWFFKIASIRELIPRLYVEA
AILKCNRFLNKTGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNF
FDLLASFRQIHSDTVQNQLVIQRVEIPVYLTLYSPAIHWILQCVAYRAPDVLLTEMMERC
KKLGNNALLLNSVMWAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLACADPA
ESERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRA
FEDAYPQLQSVMKKILTYFHNFSVLFSMEKFLPFMDMFQKDSVRVEVCKSIMEVFIKHQQ
ELTRDPVILNALLHVCKTMHDSVNALTVEDEKRSLALLINGFIRMVSFGRDFEQQLSFCV
EARATFCNLETVIIQLIHTVNQLAMETKRVMGGNHSRKTAAFVRACAAYSFITIPSLTSI
FSRLHLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRTISVEGKQRSSEAFLLDFINS
FLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQENYLY
TIPKVDSNETLYGGDPKFVAEISRLCETLIGQVLDHLKTLGREEGVRRQGSIAFALFSVL
LAHGDLRNNKLNQLAVNLWNLSHKNGYCDTRTSVRTLEHIKQQAQQPELSHLSDMLLRLS
LQSRA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttcagtggcatgctcgtgtgaggaaatacggtgcagagcttcagagatgc
caattagaggcgacaccagtggagcagggagactaccatcccctcaaacccattatagtg
acagattccaggtcacgacggggaggacgcaaaggtagcacgtcttcatcctcttcttcc
tccagctcggtggccatggaccctctgagctccatgatggagggaacagaccccctatcc
ctttttgctgcagcttcagccagcgaagtgcccacactctcgcacagcagctcttcagtg
gagttgggcaggaaacagagagaaaacgaggatgaggtgggtgcagactttgagccgtgg
tcagccaagcgtggagagatcctgtccagattcaccactacagagaaactttccataaat
ctcttcatgggctctgaaaaaaacaaggcctccagtcccagctctgctgtatcagagaag
gtccgtacacgtctggaggagctggatgacttggaggaaggctctcagagggagctgctg
aacctctctcagcaggactatgtgaagcggattgaggagcttaaccagtcgctgaaggag
gcctgggcttcagaccagaaagttaaagccctgaaaatcgtcattcagtgctccaagctt
ctgtcagacacctcagtgattcagttctacccaagcaagtttgtcctcatcactgacatc
cttgacaccttcggtcgtctggtctatgaacgtatctggtcaatgtgttcagatcctcgt
cctcaaccagactctttctctgtggaggatgtgaacgacacggccaaagagacatgcctt
aactggttcttcaagatcgcgtccatcagagaactcattcctcggctatatgtggaggct
gccatactgaaatgcaatcgtttcctcaacaaaactgggattcaggagactttgccaagg
ctgactgctatgatccgtgggattggggaccccttagtggcagtatatgcccgggcctac
ctgtgcagggtgggcatggaggtggcccctcacctgaaggacagtctgaacaagaacttt
ttcgacctgctggcttctttccgccaaattcacagtgacacagtgcagaaccagttggtg
atccagagggtggagatcccagtctacctcacactctactcccctgccatccactggatc
ctgcagtgtgtggcctacagagcaccagatgtgctgctcacagaaatgatggagaggtgc
aagaaacttggcaacaatgctcttctactcaattctgttatgtgggcgttccggcctgag
tttgtggctgcaagagccacagatttcattggtatgatcaaggactgtgacgaggctggc
tttcccaagcacctcctgtttggctctctgggccgaagtctggcctgtgctgaccctgca
gagagtgagaggctgcccatcctcaatgaagcatggaaggtcattactaaagtgcgcagt
ccacaggattatatcaactgtgctgaaatttgggtggagttcacctgtcgtcactttaca
aaaagagaagtcaacactgtgctggcggacatcatcaagcacatgacccctgaccgtgcg
tttgaggatgcttatccacagttgcagtcagtgatgaagaagatcctcacatatttccac
aacttctctgtgctcttctccatggagaagttcttgcctttcatggacatgttccagaaa
gacagtgtaagagtggaggtctgcaagtctatcatggaggtcttcatcaagcatcagcag
gaactgacccgagatcctgtcatccttaacgccctgctgcacgtctgcaagaccatgcat
gactctgtaaatgctctcacggtggaggatgagaaaagatctctagctcttctaatcaac
ggctttatccgtatggtgtcgtttggccgtgactttgagcagcaactgagcttctgtgtg
gaagccagagccacattctgcaacctagaaacagttattattcagcttattcatacggtg
aaccagctagctatggaaacgaagcgggtgatgggaggcaaccactcgcgcaaaacagca
gcgtttgtcagggcgtgtgcagcctacagcttcatcactatcccctctctgacgagcatc
ttcagccgcctccacctctacctgctgtcaggacaggtagcactggccaatcagtgcctt
tcccaagcggatgcctttctgaaagctgcggtcagcattctgccagaagtgccacgcacc
atcagtgtggagggcaaacagcgctcttctgaagccttcctgctggacttcataaacagc
ttcctatccactctgctggtggttccggaccaccccgagcagggagtgttgtacctggtg
agggggctgttaaacatggtgcaggactacacgtgggaggacaacagcgatgctaaagtg
cgagtgtatatcagcgctctgccacttctggctgccatgagtcaggagaactatttgtac
accatccctaaagtggactctaacgagacgctgtatggaggagaccctaagtttgttgct
gagatcagtcgactgtgtgagactctcattggtcaggtgctggaccacttgaagaccctc
ggacgagaagagggagttcgccggcaaggcagcatcgcatttgctctgttcagcgttctg
ctggctcatggagatctgcgcaacaacaaactcaaccagctggctgtcaacctttggaac
ctcagccacaagaacggctactgtgacacacgaacttcagtccgcaccctggagcatatc
aagcagcaagcccagcagcctgaactgtctcacctatcggatatgctgctgcgcctttcc
ctgcagtcacgagcctag
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