Astyanax mexicanus (Mexican tetra): 103042389
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Entry
103042389 CDS
T05042
Symbol
tsku
Name
(RefSeq) tsukushi isoform X1
KO
K08130
tsukushi
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amex00535
]
103042389 (tsku)
Proteoglycans [BR:
amex00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
103042389 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_EndoS
LRR_14
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
103042389
NCBI-ProteinID:
XP_049323010
UniProt:
A0A8B9H2W7
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Position
18:30171166..30189666
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AA seq
385 aa
AA seq
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MVGRHAALPLALSADSTQAFSHSAAALRKSYSARESTMVAFLCLTLSSLLALATAGEVKN
CHPQCRCEVESYGLFDSFSLTKVDCSGVGPGTAPVPIPLDTSHLDLSDNSISSITDSMLS
GPGYTTLVSLDLSNNLISKVSPQAFSKLRYLETLDLSQNALESLGDGCFSGLPLADVDLS
DNRMQVFNLDLFTTRGQETPIAVDLSNNLLTAVSRNPQSHAPFIKSLALAGNRLRMVPKL
AGIPLQYLSLDGNLITSIEQGAFEEMKDLVYLSLSGLTELSTIQPGSFRGLRNLQVLDLS
NNPQLKGVSPVMFSGLTSLQELNLSKSVETPLPVTVFDHMPSIKSLTLGPNMHCWKTHKP
GQFHRQIGQAKANDILTCDVAGIVL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcagacacgcagcattaccgttagcgcttagcgccgacagcactcaagcattc
agccattcagccgcggctttaaggaagagctactccgcccgagagagcaccatggtggcc
ttcctgtgcctcaccctgtcctctctgctggctctggcgactgcaggagaggtgaagaac
tgccacccacagtgccgatgtgaggtggagagctacggcctgttcgacagcttcagtttg
accaaggtggactgcagcggcgtgggtccaggaactgctcccgtccccattcctctggac
acgtcccacctggacctgtccgacaactccatcagctccatcactgactccatgctgtct
ggaccaggctacaccaccctggtcagccttgaccttagcaacaacctgatctccaaggtc
agcccgcaggcgttctccaaactccgctacctggagacgctggacctgagccagaacgct
ctggagagcctcggagacggctgcttctccgggcttccgttggccgacgttgacctcagc
gacaatagaatgcaggtttttaacctggatctcttcaccaccaggggccaggaaaccccg
attgctgtagatctttccaataacctcctcactgcagtctccagaaacccgcaaagccac
gctccgtttattaagagcctggcgctggcgggaaacaggctgaggatggtgcccaaactt
gcaggaattcccctgcagtatctgagcctggatggaaatctcatcaccagcatcgagcag
ggcgcctttgaggagatgaaagatctcgtctacctgtctctcagcggcctgacggagctg
tcgacgatacagcccggcagcttccgaggcctgaggaacctgcaggtcctggatctctcc
aacaaccctcaactcaagggtgtaagcccagtaatgttcagcggactgacttccttacag
gagctcaatttgtccaaatctgtcgaaacacctttgcctgtgaccgtcttcgaccacatg
ccaagcattaaaagtttaactctggggccaaacatgcattgctggaagacacacaaaccg
ggtcagtttcatagacagataggacaggctaaggctaatgatatacttacctgtgatgtt
gctggaattgtcttataa
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